PMC:7441788 / 2935-3425
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T8 | 229-232 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T9 | 250-253 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
| T10 | 308-311 | Body_part | denotes | DNA | http://purl.org/sig/ont/fma/fma74412 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T30 | 9-18 | Disease | denotes | arthritis | http://purl.obolibrary.org/obo/MONDO_0005578 |
| T31 | 20-22 | Disease | denotes | RA | http://purl.obolibrary.org/obo/MONDO_0005272|http://purl.obolibrary.org/obo/MONDO_0008383 |
| T33 | 259-265 | Disease | denotes | rabies | http://purl.obolibrary.org/obo/MONDO_0019173 |
| T34 | 280-285 | Disease | denotes | polio | http://purl.obolibrary.org/obo/MONDO_0017373 |
| T35 | 334-345 | Disease | denotes | hepatitis B | http://purl.obolibrary.org/obo/MONDO_0005344 |
| T36 | 334-343 | Disease | denotes | hepatitis | http://purl.obolibrary.org/obo/MONDO_0002251 |
| T37 | 360-374 | Disease | denotes | herpes simplex | http://purl.obolibrary.org/obo/MONDO_0004609 |
| T38 | 444-452 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13 | 56-64 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activity |
| T14 | 138-148 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activities |
| T15 | 212-220 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activity |
| T16 | 233-240 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
| T17 | 266-271 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T18 | 286-291 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T19 | 312-319 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
| T20 | 344-345 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T21 | 346-351 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T22 | 375-380 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T33 | 20-22 | Chemical | denotes | RA | http://purl.obolibrary.org/obo/CHEBI_73810 |
| T34 | 83-85 | Chemical | denotes | CQ | http://purl.obolibrary.org/obo/CHEBI_3638 |
| T35 | 113-123 | Chemical | denotes | antifungal | http://purl.obolibrary.org/obo/CHEBI_35718 |
| T36 | 128-137 | Chemical | denotes | antiviral | http://purl.obolibrary.org/obo/CHEBI_22587 |
| T37 | 187-189 | Chemical | denotes | CQ | http://purl.obolibrary.org/obo/CHEBI_3638 |
| T38 | 202-211 | Chemical | denotes | antiviral | http://purl.obolibrary.org/obo/CHEBI_22587 |
| T39 | 308-311 | Chemical | denotes | DNA | http://purl.obolibrary.org/obo/CHEBI_16991 |
| T40 | 429-431 | Chemical | denotes | CQ | http://purl.obolibrary.org/obo/CHEBI_3638 |
LitCovid-sample-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T21 | 83-85 | Chemical | denotes | CQ | http://purl.obolibrary.org/obo/CHEBI_3638 |
| T22 | 187-189 | Chemical | denotes | CQ | http://purl.obolibrary.org/obo/CHEBI_3638 |
| T23 | 229-232 | Chemical | denotes | RNA | http://purl.obolibrary.org/obo/CHEBI_33697 |
| T24 | 308-311 | Chemical | denotes | DNA | http://purl.obolibrary.org/obo/CHEBI_16991 |
| T25 | 429-431 | Chemical | denotes | CQ | http://purl.obolibrary.org/obo/CHEBI_3638 |
LitCovid-sample-PD-NCBITaxon
| Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
|---|---|---|---|---|---|
| T23 | 229-240 | Species | denotes | RNA viruses | NCBItxid:2559587 |
| T24 | 250-253 | Species | denotes | HIV | NCBItxid:57667|NCBItxid:35274|NCBItxid:12721|NCBItxid:11709|NCBItxid:11676 |
| T29 | 259-271 | Species | denotes | rabies virus | NCBItxid:11292 |
| T30 | 280-291 | Species | denotes | polio virus | NCBItxid:138950 |
| T31 | 308-319 | Species | denotes | DNA viruses | NCBItxid:2080735 |
| T32 | 334-351 | Species | denotes | hepatitis B virus | NCBItxid:10407 |
| T33 | 367-380 | Species | denotes | simplex virus | NCBItxid:10294 |
| T34 | 444-454 | Species | denotes | SARS-CoV-2 | NCBItxid:2697049 |
LitCovid-sample-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T27 | 70-153 | Sentence | denotes | In addition, CQ/HCQ display antibacterial, antifungal and antiviral activities [4]. |
| T28 | 154-385 | Sentence | denotes | In vitro studies have shown that CQ/HCQ possess antiviral activity against RNA viruses, such as HIV [5], rabies virus [6] and polio virus [7] and various DNA viruses as diverse as hepatitis B virus [8] and herpes simplex virus [9]. |
LitCovid-sample-Pubtator
| Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
|---|---|---|---|---|---|
| 103 | 429-435 | Gene | denotes | CQ/HCQ | |
| 104 | 187-193 | Gene | denotes | CQ/HCQ | |
| 108 | 259-271 | Species | denotes | rabies virus | Tax:11292 |
| 109 | 308-319 | Species | denotes | DNA viruses | Tax:2080735 |
| 110 | 444-454 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 118 | 83-89 | Chemical | denotes | CQ/HCQ | |
| 129 | 20-22 | Disease | denotes | RA | MESH:D001172 |
| 130 | 250-253 | Disease | denotes | HIV | MESH:D015658 |
LitCovid-sample-PD-IDO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T9 | 98-111 | http://purl.obolibrary.org/obo/IDO_0000562 | denotes | antibacterial |
| T10 | 113-123 | http://purl.obolibrary.org/obo/IDO_0000560 | denotes | antifungal |
| T11 | 128-137 | http://purl.obolibrary.org/obo/IDO_0000559 | denotes | antiviral |
| T12 | 202-211 | http://purl.obolibrary.org/obo/IDO_0000559 | denotes | antiviral |
| T13 | 233-240 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
| T14 | 266-271 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T15 | 286-291 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T16 | 312-319 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
| T17 | 346-351 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T18 | 375-380 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-sample-PD-FMA
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T8 | 229-232 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T9 | 250-253 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
| T10 | 308-311 | Body_part | denotes | DNA | http://purl.org/sig/ont/fma/fma74412 |
LitCovid-sample-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T27 | 20-22 | Disease | denotes | RA | http://purl.obolibrary.org/obo/MONDO_0008383 |
| T28 | 259-265 | Disease | denotes | rabies | http://purl.obolibrary.org/obo/MONDO_0019173 |
| T29 | 280-285 | Disease | denotes | polio | http://purl.obolibrary.org/obo/MONDO_0017373 |
| T30 | 334-345 | Disease | denotes | hepatitis B | http://purl.obolibrary.org/obo/MONDO_0005344 |
| T31 | 360-374 | Disease | denotes | herpes simplex | http://purl.obolibrary.org/obo/MONDO_0004609 |
| T32 | 444-454 | Disease | denotes | SARS-CoV-2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-sample-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T6 | 20-22 | Phenotype | denotes | RA | http://purl.obolibrary.org/obo/HP_0001370 |
| T7 | 334-343 | Phenotype | denotes | hepatitis | http://purl.obolibrary.org/obo/HP_0012115 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 103 | 429-435 | Gene | denotes | CQ/HCQ | |
| 104 | 187-193 | Gene | denotes | CQ/HCQ | |
| 108 | 259-271 | Species | denotes | rabies virus | Tax:11292 |
| 109 | 308-319 | Species | denotes | DNA viruses | Tax:2080735 |
| 110 | 444-454 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 118 | 83-89 | Chemical | denotes | CQ/HCQ | |
| 129 | 20-22 | Disease | denotes | RA | MESH:D001172 |
| 130 | 250-253 | Disease | denotes | HIV | MESH:D015658 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T27 | 70-153 | Sentence | denotes | In addition, CQ/HCQ display antibacterial, antifungal and antiviral activities [4]. |
| T28 | 154-385 | Sentence | denotes | In vitro studies have shown that CQ/HCQ possess antiviral activity against RNA viruses, such as HIV [5], rabies virus [6] and polio virus [7] and various DNA viruses as diverse as hepatitis B virus [8] and herpes simplex virus [9]. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T6 | 20-22 | Phenotype | denotes | RA | http://purl.obolibrary.org/obo/HP_0001370 |
| T7 | 334-343 | Phenotype | denotes | hepatitis | http://purl.obolibrary.org/obo/HP_0012115 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32496926-25693996-132195649 | 66-67 | 25693996 | denotes | 3 |
| 32496926-17629679-132195650 | 150-151 | 17629679 | denotes | 4 |
| 32496926-11166662-132195651 | 255-256 | 11166662 | denotes | 5 |
| 32496926-1658391-132195652 | 293-294 | 1658391 | denotes | 7 |
| 32496926-19760134-132195653 | 353-354 | 19760134 | denotes | 8 |
| 32496926-20466822-132195654 | 382-383 | 20466822 | denotes | 9 |