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PMC:7441788 / 13249-13440 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T85 13-16 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T86 93-97 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T87 165-170 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T152 49-59 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T153 91-97 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T154 98-108 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T155 157-160 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T156 163-170 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T157 172-174 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T169 24-26 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T170 177-179 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T111 177-179 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T97 66-176 Sentence denotes This process can inhibit T cell activation and block expression of CD154 on the surface of CD4 + T cells [41].

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
520 133-138 Gene denotes CD154 Gene:959
521 157-160 Gene denotes CD4 Gene:920
537 177-179 Chemical denotes CQ MESH:D002738

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T897 133-138 Protein denotes CD154 https://www.uniprot.org/uniprot/Q9Z2V2|https://www.uniprot.org/uniprot/Q9R254|https://www.uniprot.org/uniprot/Q9BDN3|https://www.uniprot.org/uniprot/Q9BDM7|https://www.uniprot.org/uniprot/Q9BDM3|https://www.uniprot.org/uniprot/Q9BDC7|https://www.uniprot.org/uniprot/Q95MQ5|https://www.uniprot.org/uniprot/P63305|https://www.uniprot.org/uniprot/P63304|https://www.uniprot.org/uniprot/P51749|https://www.uniprot.org/uniprot/P29965|https://www.uniprot.org/uniprot/P27548|https://www.uniprot.org/uniprot/O97626|https://www.uniprot.org/uniprot/O97605
T911 157-160 Protein denotes CD4 https://www.uniprot.org/uniprot/Q9XS78|https://www.uniprot.org/uniprot/Q9UDE5|https://www.uniprot.org/uniprot/Q5U066|https://www.uniprot.org/uniprot/Q4ZGK2|https://www.uniprot.org/uniprot/Q29617|https://www.uniprot.org/uniprot/Q29037|https://www.uniprot.org/uniprot/Q28217|https://www.uniprot.org/uniprot/Q08340|https://www.uniprot.org/uniprot/Q08339|https://www.uniprot.org/uniprot/Q08338|https://www.uniprot.org/uniprot/Q08336|https://www.uniprot.org/uniprot/P79196|https://www.uniprot.org/uniprot/P79185|https://www.uniprot.org/uniprot/P79184|https://www.uniprot.org/uniprot/P46630|https://www.uniprot.org/uniprot/P33705|https://www.uniprot.org/uniprot/P16004|https://www.uniprot.org/uniprot/P16003|https://www.uniprot.org/uniprot/P06332|https://www.uniprot.org/uniprot/P05542|https://www.uniprot.org/uniprot/P05540|https://www.uniprot.org/uniprot/P01730|https://www.uniprot.org/uniprot/O77593|https://www.uniprot.org/uniprot/O02805|https://www.uniprot.org/uniprot/D3DUS5|https://www.uniprot.org/uniprot/B2R737

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T104 93-97 http://purl.obolibrary.org/obo/CL_0000000 denotes cell
T105 165-170 http://purl.obolibrary.org/obo/CL_0000000 denotes cells

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T85 13-16 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T86 93-97 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T87 165-170 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T50 13-16 http://purl.obolibrary.org/obo/GO_0046776 denotes MHC
T51 83-108 http://purl.obolibrary.org/obo/GO_0050868 denotes inhibit T cell activation
T52 91-108 http://purl.obolibrary.org/obo/GO_0042110 denotes T cell activation
T53 93-108 http://purl.obolibrary.org/obo/GO_0001775 denotes cell activation

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T47 13-16 http://purl.obolibrary.org/obo/GO_0046776 denotes MHC
T48 83-108 http://purl.obolibrary.org/obo/GO_0050868 denotes inhibit T cell activation
T49 91-108 http://purl.obolibrary.org/obo/GO_0042110 denotes T cell activation
T50 93-108 http://purl.obolibrary.org/obo/GO_0001775 denotes cell activation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T47 13-16 http://purl.obolibrary.org/obo/GO_0046776 denotes MHC
T48 83-108 http://purl.obolibrary.org/obo/GO_0050868 denotes inhibit T cell activation
T49 91-108 http://purl.obolibrary.org/obo/GO_0042110 denotes T cell activation
T50 93-108 http://purl.obolibrary.org/obo/GO_0001775 denotes cell activation

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
520 133-138 Gene denotes CD154 Gene:959
521 157-160 Gene denotes CD4 Gene:920
537 177-179 Chemical denotes CQ MESH:D002738

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T97 66-176 Sentence denotes This process can inhibit T cell activation and block expression of CD154 on the surface of CD4 + T cells [41].

2_test

Id Subject Object Predicate Lexical cue
32496926-2250716-132195693 61-63 2250716 denotes 40
32496926-28793932-132195694 172-174 28793932 denotes 41