PMC:7441777 / 25111-25867 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T42","span":{"begin":22,"end":30},"obj":"Body_part"},{"id":"T43","span":{"begin":37,"end":43},"obj":"Body_part"},{"id":"T44","span":{"begin":232,"end":234},"obj":"Body_part"}],"attributes":[{"id":"A42","pred":"fma_id","subj":"T42","obj":"http://purl.org/sig/ont/fma/fma13478"},{"id":"A43","pred":"fma_id","subj":"T43","obj":"http://purl.org/sig/ont/fma/fma23463"},{"id":"A44","pred":"fma_id","subj":"T44","obj":"http://purl.org/sig/ont/fma/fma66595"}],"text":"Table 3. The average backbone RMSD, radius of gyration (RoG), and solvent accessible surface area (SASA) for all nine complexes. The data are reported as average ± standard error of the mean (SEM).\nSystem RMSD (Å) RoG (Å) SASA (Å2)\nRdRp/Remdesivir 2.30 ± 0.03 29.96 ± 0.02 34973.20 ± 91.56\nRdRp/EGCG 2.45 ± 0.05 29.52 ± 0.06 35026.03 ± 63.52\nRdRp/TF3 1.87 ± 0.02 29.60 ± 0.01 34080.16 ± 53.41\nRdRp/TF2b 2.28 ± 0.01 29.86 ± 0.02 35462.92 ± 50.40\nRdRp/TF2a 1.68 ± 0.02 29.75 ± 0.02 34312.55 ± 112.89\nRdRp/Myricetin 2.47 ± 0.03 29.88 ± 0.01 35395.35 ± 104.67\nRdRp/Quercetagetin 1.90 ± 0.03 29.84 ± 0.01 34618.65 ± 51.25\nRdRp/Hesperidin 2.03 ± 0.04 29.74 ± 0.02 34554.08 ± 47.25\nRdRp/TF1 1.88 ± 0.03 29.86 ± 0.01 34420.69 ± 56.90"}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T158","span":{"begin":213,"end":214},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T159","span":{"begin":222,"end":223},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T160","span":{"begin":232,"end":234},"obj":"http://purl.obolibrary.org/obo/CLO_0001562"},{"id":"T161","span":{"begin":232,"end":234},"obj":"http://purl.obolibrary.org/obo/CLO_0001563"},{"id":"T162","span":{"begin":708,"end":711},"obj":"http://purl.obolibrary.org/obo/CLO_0009325"}],"text":"Table 3. The average backbone RMSD, radius of gyration (RoG), and solvent accessible surface area (SASA) for all nine complexes. The data are reported as average ± standard error of the mean (SEM).\nSystem RMSD (Å) RoG (Å) SASA (Å2)\nRdRp/Remdesivir 2.30 ± 0.03 29.96 ± 0.02 34973.20 ± 91.56\nRdRp/EGCG 2.45 ± 0.05 29.52 ± 0.06 35026.03 ± 63.52\nRdRp/TF3 1.87 ± 0.02 29.60 ± 0.01 34080.16 ± 53.41\nRdRp/TF2b 2.28 ± 0.01 29.86 ± 0.02 35462.92 ± 50.40\nRdRp/TF2a 1.68 ± 0.02 29.75 ± 0.02 34312.55 ± 112.89\nRdRp/Myricetin 2.47 ± 0.03 29.88 ± 0.01 35395.35 ± 104.67\nRdRp/Quercetagetin 1.90 ± 0.03 29.84 ± 0.01 34618.65 ± 51.25\nRdRp/Hesperidin 2.03 ± 0.04 29.74 ± 0.02 34554.08 ± 47.25\nRdRp/TF1 1.88 ± 0.03 29.86 ± 0.01 34420.69 ± 56.90"}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T360","span":{"begin":67,"end":74},"obj":"Chemical"},{"id":"T361","span":{"begin":302,"end":306},"obj":"Chemical"},{"id":"T362","span":{"begin":357,"end":360},"obj":"Chemical"},{"id":"T363","span":{"begin":522,"end":531},"obj":"Chemical"},{"id":"T364","span":{"begin":583,"end":596},"obj":"Chemical"},{"id":"T365","span":{"begin":647,"end":657},"obj":"Chemical"}],"attributes":[{"id":"A360","pred":"chebi_id","subj":"T360","obj":"http://purl.obolibrary.org/obo/CHEBI_46787"},{"id":"A361","pred":"chebi_id","subj":"T361","obj":"http://purl.obolibrary.org/obo/CHEBI_4806"},{"id":"A362","pred":"chebi_id","subj":"T362","obj":"http://purl.obolibrary.org/obo/CHEBI_136608"},{"id":"A363","pred":"chebi_id","subj":"T363","obj":"http://purl.obolibrary.org/obo/CHEBI_18152"},{"id":"A364","pred":"chebi_id","subj":"T364","obj":"http://purl.obolibrary.org/obo/CHEBI_8695"},{"id":"A365","pred":"chebi_id","subj":"T365","obj":"http://purl.obolibrary.org/obo/CHEBI_28775"},{"id":"A366","pred":"chebi_id","subj":"T365","obj":"http://purl.obolibrary.org/obo/CHEBI_61606"}],"text":"Table 3. The average backbone RMSD, radius of gyration (RoG), and solvent accessible surface area (SASA) for all nine complexes. The data are reported as average ± standard error of the mean (SEM).\nSystem RMSD (Å) RoG (Å) SASA (Å2)\nRdRp/Remdesivir 2.30 ± 0.03 29.96 ± 0.02 34973.20 ± 91.56\nRdRp/EGCG 2.45 ± 0.05 29.52 ± 0.06 35026.03 ± 63.52\nRdRp/TF3 1.87 ± 0.02 29.60 ± 0.01 34080.16 ± 53.41\nRdRp/TF2b 2.28 ± 0.01 29.86 ± 0.02 35462.92 ± 50.40\nRdRp/TF2a 1.68 ± 0.02 29.75 ± 0.02 34312.55 ± 112.89\nRdRp/Myricetin 2.47 ± 0.03 29.88 ± 0.01 35395.35 ± 104.67\nRdRp/Quercetagetin 1.90 ± 0.03 29.84 ± 0.01 34618.65 ± 51.25\nRdRp/Hesperidin 2.03 ± 0.04 29.74 ± 0.02 34554.08 ± 47.25\nRdRp/TF1 1.88 ± 0.03 29.86 ± 0.01 34420.69 ± 56.90"}

{"project":"LitCovid-PubTator","denotations":[{"id":"604","span":{"begin":236,"end":240},"obj":"Gene"},{"id":"605","span":{"begin":297,"end":301},"obj":"Gene"},{"id":"606","span":{"begin":406,"end":410},"obj":"Gene"},{"id":"607","span":{"begin":411,"end":415},"obj":"Gene"},{"id":"608","span":{"begin":461,"end":465},"obj":"Gene"},{"id":"609","span":{"begin":466,"end":473},"obj":"Gene"},{"id":"610","span":{"begin":517,"end":521},"obj":"Gene"},{"id":"611","span":{"begin":578,"end":582},"obj":"Gene"},{"id":"612","span":{"begin":642,"end":646},"obj":"Gene"},{"id":"613","span":{"begin":241,"end":251},"obj":"Chemical"}],"attributes":[{"id":"A604","pred":"tao:has_database_id","subj":"604","obj":"Gene:43740578"},{"id":"A605","pred":"tao:has_database_id","subj":"605","obj":"Gene:43740578"},{"id":"A606","pred":"tao:has_database_id","subj":"606","obj":"Gene:43740578"},{"id":"A607","pred":"tao:has_database_id","subj":"607","obj":"Gene:2959"},{"id":"A608","pred":"tao:has_database_id","subj":"608","obj":"Gene:43740578"},{"id":"A609","pred":"tao:has_database_id","subj":"609","obj":"Gene:2957"},{"id":"A610","pred":"tao:has_database_id","subj":"610","obj":"Gene:43740578"},{"id":"A611","pred":"tao:has_database_id","subj":"611","obj":"Gene:43740578"},{"id":"A612","pred":"tao:has_database_id","subj":"612","obj":"Gene:43740578"},{"id":"A613","pred":"tao:has_database_id","subj":"613","obj":"MESH:C000606551"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Table 3. The average backbone RMSD, radius of gyration (RoG), and solvent accessible surface area (SASA) for all nine complexes. The data are reported as average ± standard error of the mean (SEM).\nSystem RMSD (Å) RoG (Å) SASA (Å2)\nRdRp/Remdesivir 2.30 ± 0.03 29.96 ± 0.02 34973.20 ± 91.56\nRdRp/EGCG 2.45 ± 0.05 29.52 ± 0.06 35026.03 ± 63.52\nRdRp/TF3 1.87 ± 0.02 29.60 ± 0.01 34080.16 ± 53.41\nRdRp/TF2b 2.28 ± 0.01 29.86 ± 0.02 35462.92 ± 50.40\nRdRp/TF2a 1.68 ± 0.02 29.75 ± 0.02 34312.55 ± 112.89\nRdRp/Myricetin 2.47 ± 0.03 29.88 ± 0.01 35395.35 ± 104.67\nRdRp/Quercetagetin 1.90 ± 0.03 29.84 ± 0.01 34618.65 ± 51.25\nRdRp/Hesperidin 2.03 ± 0.04 29.74 ± 0.02 34554.08 ± 47.25\nRdRp/TF1 1.88 ± 0.03 29.86 ± 0.01 34420.69 ± 56.90"}

{"project":"LitCovid-PD-GlycoEpitope","denotations":[{"id":"T11","span":{"begin":708,"end":711},"obj":"GlycoEpitope"}],"attributes":[{"id":"A11","pred":"glyco_epitope_db_id","subj":"T11","obj":"http://www.glycoepitope.jp/epitopes/AN0049"}],"text":"Table 3. The average backbone RMSD, radius of gyration (RoG), and solvent accessible surface area (SASA) for all nine complexes. The data are reported as average ± standard error of the mean (SEM).\nSystem RMSD (Å) RoG (Å) SASA (Å2)\nRdRp/Remdesivir 2.30 ± 0.03 29.96 ± 0.02 34973.20 ± 91.56\nRdRp/EGCG 2.45 ± 0.05 29.52 ± 0.06 35026.03 ± 63.52\nRdRp/TF3 1.87 ± 0.02 29.60 ± 0.01 34080.16 ± 53.41\nRdRp/TF2b 2.28 ± 0.01 29.86 ± 0.02 35462.92 ± 50.40\nRdRp/TF2a 1.68 ± 0.02 29.75 ± 0.02 34312.55 ± 112.89\nRdRp/Myricetin 2.47 ± 0.03 29.88 ± 0.01 35395.35 ± 104.67\nRdRp/Quercetagetin 1.90 ± 0.03 29.84 ± 0.01 34618.65 ± 51.25\nRdRp/Hesperidin 2.03 ± 0.04 29.74 ± 0.02 34554.08 ± 47.25\nRdRp/TF1 1.88 ± 0.03 29.86 ± 0.01 34420.69 ± 56.90"}

{"project":"LitCovid-sentences","denotations":[{"id":"T240","span":{"begin":0,"end":8},"obj":"Sentence"},{"id":"T241","span":{"begin":10,"end":129},"obj":"Sentence"},{"id":"T242","span":{"begin":130,"end":198},"obj":"Sentence"},{"id":"T243","span":{"begin":199,"end":235},"obj":"Sentence"},{"id":"T244","span":{"begin":236,"end":296},"obj":"Sentence"},{"id":"T245","span":{"begin":297,"end":351},"obj":"Sentence"},{"id":"T246","span":{"begin":352,"end":405},"obj":"Sentence"},{"id":"T247","span":{"begin":406,"end":460},"obj":"Sentence"},{"id":"T248","span":{"begin":461,"end":516},"obj":"Sentence"},{"id":"T249","span":{"begin":517,"end":577},"obj":"Sentence"},{"id":"T250","span":{"begin":578,"end":641},"obj":"Sentence"},{"id":"T251","span":{"begin":642,"end":702},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Table 3. The average backbone RMSD, radius of gyration (RoG), and solvent accessible surface area (SASA) for all nine complexes. The data are reported as average ± standard error of the mean (SEM).\nSystem RMSD (Å) RoG (Å) SASA (Å2)\nRdRp/Remdesivir 2.30 ± 0.03 29.96 ± 0.02 34973.20 ± 91.56\nRdRp/EGCG 2.45 ± 0.05 29.52 ± 0.06 35026.03 ± 63.52\nRdRp/TF3 1.87 ± 0.02 29.60 ± 0.01 34080.16 ± 53.41\nRdRp/TF2b 2.28 ± 0.01 29.86 ± 0.02 35462.92 ± 50.40\nRdRp/TF2a 1.68 ± 0.02 29.75 ± 0.02 34312.55 ± 112.89\nRdRp/Myricetin 2.47 ± 0.03 29.88 ± 0.01 35395.35 ± 104.67\nRdRp/Quercetagetin 1.90 ± 0.03 29.84 ± 0.01 34618.65 ± 51.25\nRdRp/Hesperidin 2.03 ± 0.04 29.74 ± 0.02 34554.08 ± 47.25\nRdRp/TF1 1.88 ± 0.03 29.86 ± 0.01 34420.69 ± 56.90"}