PMC:7435837 / 45838-46830
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T294 | 147-155 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T295 | 195-202 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T296 | 255-259 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T297 | 375-379 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T298 | 482-486 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T299 | 596-611 | Body_part | denotes | dendritic cells | http://purl.org/sig/ont/fma/fma273565 |
T300 | 606-611 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T301 | 649-662 | Body_part | denotes | cell membrane | http://purl.org/sig/ont/fma/fma63841 |
T302 | 649-653 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T303 | 668-683 | Body_part | denotes | dendritic cells | http://purl.org/sig/ont/fma/fma273565 |
T304 | 678-683 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T305 | 705-714 | Body_part | denotes | cytokines | http://purl.org/sig/ont/fma/fma84050 |
T306 | 775-783 | Body_part | denotes | cytokine | http://purl.org/sig/ont/fma/fma84050 |
T307 | 803-808 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T308 | 817-822 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T309 | 907-911 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T310 | 912-921 | Body_part | denotes | lysosomes | http://purl.org/sig/ont/fma/fma63836 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T422 | 53-58 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T423 | 84-85 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T424 | 99-100 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T425 | 122-123 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T426 | 130-135 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T427 | 234-235 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
T428 | 238-239 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T429 | 255-259 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T430 | 311-319 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
T431 | 338-343 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T432 | 375-379 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T433 | 392-400 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
T434 | 445-450 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T435 | 482-486 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T436 | 546-551 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T437 | 572-577 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T438 | 596-611 | http://purl.obolibrary.org/obo/CL_0000451 | denotes | dendritic cells |
T439 | 649-653 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T440 | 654-662 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
T441 | 668-683 | http://purl.obolibrary.org/obo/CL_0000451 | denotes | dendritic cells |
T442 | 684-689 | http://purl.obolibrary.org/obo/CLO_0007225 | denotes | label |
T443 | 694-699 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T444 | 715-718 | http://purl.obolibrary.org/obo/PR_000001004 | denotes | CD4 |
T445 | 720-723 | http://purl.obolibrary.org/obo/CLO_0053438 | denotes | CD8 |
T446 | 784-791 | http://purl.obolibrary.org/obo/CLO_0007225 | denotes | labeled |
T447 | 792-797 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T448 | 801-808 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T-cells |
T449 | 810-816 | http://purl.obolibrary.org/obo/CLO_0004265 | denotes | (H). T |
T450 | 817-822 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T451 | 837-840 | http://purl.obolibrary.org/obo/PR_000001004 | denotes | CD4 |
T452 | 842-845 | http://purl.obolibrary.org/obo/CLO_0053438 | denotes | CD8 |
T453 | 847-853 | http://purl.obolibrary.org/obo/CLO_0007225 | denotes | labels |
T454 | 874-879 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T455 | 905-911 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T-cell |
T456 | 912-921 | http://purl.obolibrary.org/obo/GO_0005764 | denotes | lysosomes |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T554 | 147-155 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T555 | 170-178 | Chemical | denotes | N-glycan | http://purl.obolibrary.org/obo/CHEBI_59520 |
T556 | 195-202 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T557 | 684-689 | Chemical | denotes | label | http://purl.obolibrary.org/obo/CHEBI_35209 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T35 | 392-407 | http://purl.obolibrary.org/obo/GO_0061025 | denotes | membrane fusion |
T36 | 431-443 | http://purl.obolibrary.org/obo/GO_0006909 | denotes | phagocytosis |
T37 | 964-975 | http://purl.obolibrary.org/obo/GO_0009056 | denotes | degradation |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1419 | 141-146 | Gene | denotes | spike | Gene:43740568 |
1420 | 170-178 | Chemical | denotes | N-glycan | |
1421 | 269-275 | Chemical | denotes | glycan | MESH:D011134 |
1422 | 303-310 | Chemical | denotes | bilipid | |
1423 | 344-350 | Chemical | denotes | glycan | MESH:D011134 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T354 | 70-125 | Sentence | denotes | Either route (A–D) or route (A–I) can be followed. (A). |
T355 | 126-237 | Sentence | denotes | The virus with spike proteins comprising of N-glycan moieties on the protein (red and green) is presented. (B). |
T356 | 238-333 | Sentence | denotes | A potential host cell presents glycan-recognizing lectins on its bilipid membrane surface. (C). |
T357 | 334-476 | Sentence | denotes | The virus glycan array binds to the host cell lectins and membrane fusion is initiated and after phagocytosis, virus replication follows. (D). |
T358 | 477-567 | Sentence | denotes | Host cell destruction takes place with the subsequent release of new virus particles. (E). |
T359 | 568-663 | Sentence | denotes | The virus is intercepted by dendritic cells before it can interact with the host cell membrane. |
T360 | 664-814 | Sentence | denotes | The dendritic cells label the virus with cytokines CD4+/CD8+ (green and orange symbols), and (G). presents the cytokine-labeled virus to T-cells. (H). |
T361 | 815-927 | Sentence | denotes | T-cells recognize the CD4+/CD8+ labels and phagocytose the virus that is destroyed in the T-cell lysosomes. (I). |
T362 | 928-992 | Sentence | denotes | Only inactive, non-pathogenic viral degradation products remain. |