PMC:7435837 / 4248-4971
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T30 | 36-49 | Body_part | denotes | glycoproteins | http://purl.org/sig/ont/fma/fma62925 |
| T31 | 189-193 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T32 | 216-229 | Body_part | denotes | cell membrane | http://purl.org/sig/ont/fma/fma63841 |
| T33 | 216-220 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T34 | 282-295 | Body_part | denotes | cell membrane | http://purl.org/sig/ont/fma/fma63841 |
| T35 | 282-286 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T36 | 361-375 | Body_part | denotes | cell membranes | http://purl.org/sig/ont/fma/fma63841 |
| T37 | 361-365 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T38 | 589-599 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T5 | 53-61 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T39 | 0-1 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T40 | 143-149 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | active |
| T41 | 189-193 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T42 | 216-220 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T43 | 221-229 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
| T44 | 240-242 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T45 | 282-286 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T46 | 287-295 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
| T47 | 309-311 | http://purl.obolibrary.org/obo/CLO_0008922 | denotes | S2 |
| T48 | 309-311 | http://purl.obolibrary.org/obo/CLO_0050052 | denotes | S2 |
| T49 | 361-365 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T50 | 366-375 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membranes |
| T51 | 381-383 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T52 | 452-453 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T53 | 525-531 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
| T54 | 566-567 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T55 | 589-608 | http://purl.obolibrary.org/obo/CHEBI_33708 | denotes | amino acid residues |
| T56 | 589-608 | http://purl.obolibrary.org/obo/PR_000036907 | denotes | amino acid residues |
| T57 | 622-624 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T34 | 36-49 | Chemical | denotes | glycoproteins | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T35 | 309-311 | Chemical | denotes | S2 | http://purl.obolibrary.org/obo/CHEBI_29387 |
| T36 | 482-493 | Chemical | denotes | angiotensin | http://purl.obolibrary.org/obo/CHEBI_48433 |
| T37 | 589-599 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T38 | 589-594 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T39 | 595-599 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 65 | 482-513 | Gene | denotes | angiotensin-converting-enzyme 2 | Gene:59272 |
| 66 | 515-520 | Gene | denotes | ACE-2 | Gene:59272 |
| 67 | 53-63 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 68 | 422-435 | Species | denotes | coronaviruses | Tax:11118 |
| 69 | 525-531 | Species | denotes | humans | Tax:9606 |
| 70 | 673-686 | Species | denotes | coronaviruses | Tax:11118 |
| 71 | 30-35 | Gene | denotes | spike | Gene:43740568 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T37 | 0-120 | Sentence | denotes | A detailed description of the spike glycoproteins of SARS-CoV-2 reported that two binding subunits can be distinguished. |
| T38 | 121-230 | Sentence | denotes | These subunits become active when the two units are cleaved by host cell proteases on the host cell membrane. |
| T39 | 231-376 | Sentence | denotes | Subunit, S1 is responsible for binding to the host cell membrane and subunit, S2 is responsible for fusion of the virion and host cell membranes. |
| T40 | 377-471 | Sentence | denotes | The S1 unit is the factor that makes various coronaviruses specific toward a certain host [8]. |
| T41 | 472-723 | Sentence | denotes | Pulmonary angiotensin-converting-enzyme 2 (ACE-2) in humans exhibit the appropriate receptor, a specific sequence of amino acid residues [9], towards S1 and partly explains the effective spread of the coronaviruses via droplets in the atmosphere [10]. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32731428-32155444-71421248 | 468-469 | 32155444 | denotes | 8 |
| 32731428-14651994-71421249 | 610-611 | 14651994 | denotes | 9 |
| 32731428-18931070-71421250 | 719-721 | 18931070 | denotes | 10 |