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PMC:7435837 / 25795-30017 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T230 398-404 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T231 3273-3282 Body_part denotes cellulose http://purl.org/sig/ont/fma/fma82748
T232 3316-3325 Body_part denotes cellulose http://purl.org/sig/ont/fma/fma82748
T233 3379-3388 Body_part denotes Cellulose http://purl.org/sig/ont/fma/fma82748
T234 3561-3569 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T235 3583-3587 Body_part denotes GAGs http://purl.org/sig/ont/fma/fma63011
T236 3617-3626 Body_part denotes cellulose http://purl.org/sig/ont/fma/fma82748
T237 3756-3765 Body_part denotes cellulose http://purl.org/sig/ont/fma/fma82748
T238 3949-3958 Body_part denotes cellulose http://purl.org/sig/ont/fma/fma82748
T239 3981-3985 Body_part denotes GAGs http://purl.org/sig/ont/fma/fma63011

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T15 398-404 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T46 351-360 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T47 1018-1027 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T48 1113-1121 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T49 1707-1715 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T50 1957-1965 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T51 2005-2013 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T52 2378-2381 Disease denotes MS2 http://purl.obolibrary.org/obo/MONDO_0012956

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T256 192-193 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T257 361-366 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T258 421-430 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membranes
T259 445-452 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T260 488-494 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T261 637-640 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T262 710-717 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T263 862-868 http://purl.obolibrary.org/obo/OBI_0000968 denotes device
T264 911-912 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T265 1028-1029 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T266 1030-1035 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T267 1416-1417 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T268 1520-1523 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T269 1549-1556 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T270 1610-1615 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T271 1753-1754 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T272 1780-1790 http://purl.obolibrary.org/obo/OBI_0000968 denotes instrument
T273 1806-1813 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T274 1838-1845 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T275 1929-1934 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T276 2355-2356 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T277 2386-2387 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T278 2822-2830 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T279 2861-2866 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T280 2962-2963 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T281 2991-2994 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T282 3247-3248 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T283 3301-3304 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T284 3627-3630 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T285 3654-3655 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T286 3741-3744 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T287 3859-3862 http://purl.obolibrary.org/obo/CLO_0001002 denotes 162
T288 3916-3917 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T289 3947-3948 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T290 4048-4055 http://purl.obolibrary.org/obo/OBI_0000968 denotes devices
T291 4065-4066 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T292 4113-4118 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T293 4202-4207 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T367 28-33 Chemical denotes water http://purl.obolibrary.org/obo/CHEBI_15377
T368 125-132 Chemical denotes silicon http://purl.obolibrary.org/obo/CHEBI_27573
T369 174-178 Chemical denotes PTFE http://purl.obolibrary.org/obo/CHEBI_53251
T370 481-486 Chemical denotes water http://purl.obolibrary.org/obo/CHEBI_15377
T371 752-761 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T372 1669-1673 Chemical denotes PTFE http://purl.obolibrary.org/obo/CHEBI_53251
T373 2242-2258 Chemical denotes carbon nanotubes http://purl.obolibrary.org/obo/CHEBI_50594
T374 2242-2248 Chemical denotes carbon http://purl.obolibrary.org/obo/CHEBI_27594|http://purl.obolibrary.org/obo/CHEBI_33415
T376 2460-2469 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T377 2669-2680 Chemical denotes application http://purl.obolibrary.org/obo/CHEBI_33232
T378 2781-2784 Chemical denotes PEI http://purl.obolibrary.org/obo/CHEBI_144613|http://purl.obolibrary.org/obo/CHEBI_53231
T380 2812-2821 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T381 2975-2984 Chemical denotes polyimide http://purl.obolibrary.org/obo/CHEBI_53232|http://purl.obolibrary.org/obo/CHEBI_61484
T383 3019-3026 Chemical denotes silicon http://purl.obolibrary.org/obo/CHEBI_27573
T384 3362-3371 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T385 3379-3388 Chemical denotes Cellulose http://purl.obolibrary.org/obo/CHEBI_18246
T386 3389-3394 Chemical denotes ester http://purl.obolibrary.org/obo/CHEBI_35701
T387 3459-3468 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T388 3561-3569 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T389 3583-3587 Chemical denotes GAGs http://purl.obolibrary.org/obo/CHEBI_18085
T390 3674-3683 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T391 3715-3726 Chemical denotes application http://purl.obolibrary.org/obo/CHEBI_33232
T392 3828-3836 Chemical denotes chitosan http://purl.obolibrary.org/obo/CHEBI_16261|http://purl.obolibrary.org/obo/CHEBI_57704
T394 3971-3980 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T395 3981-3985 Chemical denotes GAGs http://purl.obolibrary.org/obo/CHEBI_18085

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T26 1223-1232 http://purl.obolibrary.org/obo/GO_0006810 denotes transport

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
597 35-48 Species denotes coronaviruses Tax:11118
598 286-294 Species denotes MERS-CoV Tax:1335626
599 351-366 Species denotes influenza virus Tax:11308
600 28-33 Chemical denotes water MESH:D014867
601 174-178 Chemical denotes PTFE MESH:D011138
604 488-494 Species denotes humans Tax:9606
605 481-486 Chemical denotes water MESH:D014867
610 1018-1035 Species denotes influenza A virus Tax:11320
611 1071-1079 Species denotes patients Tax:9606
612 1113-1123 Species denotes SARS-CoV-2 Tax:2697049
613 1099-1107 Disease denotes infected MESH:D007239
617 1582-1592 Species denotes adenovirus Tax:10508
618 1598-1615 Species denotes torque teno virus Tax:68887
619 1707-1715 Species denotes SARS-CoV Tax:694009
624 1929-1934 Species denotes human Tax:9606
625 1935-1948 Species denotes coronaviruses Tax:11118
626 1957-1965 Species denotes SARS-CoV Tax:694009
627 2005-2015 Species denotes SARS-CoV-2 Tax:2697049
630 2363-2381 Species denotes bacteriophage, MS2 Tax:12022
631 2242-2248 Chemical denotes carbon MESH:D002244
636 2847-2860 Species denotes bacteriophage Tax:38018
637 2781-2784 Chemical denotes PEI
638 2900-2903 Chemical denotes dip MESH:C067227
639 2922-2925 Chemical denotes LbL
642 2975-2984 Chemical denotes polyimide
643 3019-3026 Chemical denotes silicon MESH:D012825
648 3555-3560 Gene denotes spike Gene:43740568
649 3379-3394 Chemical denotes Cellulose ester
650 3797-3800 Chemical denotes LbL
651 3828-3836 Chemical denotes chitosan MESH:D048271
655 4202-4207 Species denotes human Tax:9606
656 4208-4221 Species denotes coronaviruses Tax:11118
657 4014-4017 Chemical denotes LbL

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T197 0-4 Sentence denotes 6.2.
T198 5-19 Sentence denotes Air Filtration
T199 20-259 Sentence denotes As with water, coronaviruses survive on inanimate surfaces [133] that include metal, glass, wood, paper, silicon, surgical gloves, plastic, and non-stick PTFE surfaces for a period of up to nine days on plastic and two days on steel [134].
T200 260-381 Sentence denotes It was also observed that MERS-CoV could survive in the air for much longer durations than influenza virus strains [135].
T201 382-459 Sentence denotes However, living tissue such as mucosal membranes harbors these viruses [136].
T202 460-571 Sentence denotes As with the need for water, humans need to breathe and are, therefore, naturally exposed to all these surfaces.
T203 572-656 Sentence denotes The need for broad-spectrum protection against airborne microbes has been expressed.
T204 657-886 Sentence denotes Three protective measures against airborne spread of viruses have been suggested to ensure the antiviral efficiency of filter materials and lastly, that these materials are not limited to only one type of device or surface [137].
T205 887-1042 Sentence denotes Wearing facial masks is a commonly recommended prophylactic measure against the spread of airborne pathogens [138,139] such as the influenza A virus [140].
T206 1043-1255 Sentence denotes It is even recommended that patients suspected of being infected with SARS-CoV-2 should be fitted with masks during surgery or procedure requiring anesthesia [141] and also during transport to the hospital [142].
T207 1256-1452 Sentence denotes FFP2 and FFP3/N95 masks offer significant protection against airborne particles and even then the FFP3 masks filter at least 99% of airborne particles, leaving a gap for some particle penetration.
T208 1453-1516 Sentence denotes These masks also still pose the risk of improper sealing [143].
T209 1517-1797 Sentence denotes It has been shown that airborne viruses, for example, norovirus, adenovirus, and torque teno virus can be detected in air samples [144] on for instance PTFE filters that were used to detect SARS-CoV [145], and MERS by the employment of a specialized air sampling instrument [146].
T210 1798-2145 Sentence denotes Several viruses, especially respiratory viruses are effectively distributed by airborne droplets [147,148], and very obviously the human coronaviruses such as SARS-CoV [145,149,150], MERS [146,151,152], and SARS-CoV-2 [153,154,155,156] even though some controversy exists regarding respiratory transmission as the only means of distribution [157].
T211 2146-2203 Sentence denotes Some examples of viral air filtration are discussed next.
T212 2204-2259 Sentence denotes HEPA filters were coated with charged carbon nanotubes.
T213 2260-2418 Sentence denotes During the filtration study, the nanotubes were shown to be 92% effective in the filtration of a viral bacteriophage, MS2, as a model of viral particle [158].
T214 2419-2547 Sentence denotes There are virtually no reports on coated antiviral air filters, let alone employing an LbL coating method to create these masks.
T215 2548-2727 Sentence denotes These are rapid inactivation action, broad-spectrum inactivation not only against specific strains, and lastly universal application on various media, not just facial masks [159].
T216 2728-2867 Sentence denotes The coating of the filter fabric of these masks with PEI achieved more than 99.999% antiviral activity against the T4D bacteriophage virus.
T217 2868-2961 Sentence denotes These coatings were achieved by dip coating, however, LbL nanocoating was not reported [159].
T218 2962-3062 Sentence denotes A disposable polyimide layer has been coated onto porous silicon-based masks, including an N95 mask.
T219 3063-3171 Sentence denotes The layer proved to be hydrophobic and prevented the accumulation of droplets on the mask almost completely.
T220 3172-3246 Sentence denotes The film can be peeled off after use and replaced to reuse the mask [160].
T221 3247-3378 Sentence denotes A comprehensive review of cellulose-based air filters has shown that cellulose is an effective material to produce antiviral masks.
T222 3379-3588 Sentence denotes Cellulose ester materials that are anionic are still seen as the most effective antiviral material in filters and again affirms the potential interaction of positively charged spike proteins and negative GAGs.
T223 3589-3698 Sentence denotes However, LbL nanocoating of cellulose has both been described as a method to produce antiviral filters [161].
T224 3699-3864 Sentence denotes In an unrelated application, our research has shown that cellulose can be coated easily employing LbL coating with, for example, chitosan as coating materials [162].
T225 3865-3986 Sentence denotes It is proposed that it would be possible to modify a facial mask that is based on a cellulose fabric with antiviral GAGs.
T226 3987-4222 Sentence denotes There are indications that LbL nanocoating of air filtration devices can make a significant contribution to the prevention of virus distribution and be very relevant to the prevention of the respiratory variants of human coronaviruses.

2_test

Id Subject Object Predicate Lexical cue
32731428-32035997-71421333 254-257 32035997 denotes 134
32731428-32226116-71421334 376-379 32226116 denotes 135
32731428-28733078-71421335 881-884 28733078 denotes 137
32731428-21503394-71421336 997-1000 21503394 denotes 138
32731428-32335167-71421337 1001-1004 32335167 denotes 139
32731428-17413061-71421338 1037-1040 17413061 denotes 140
32731428-32115186-71421339 1250-1253 32115186 denotes 142
32731428-21236516-71421340 1511-1514 21236516 denotes 143
32731428-21277649-71421341 1648-1651 21277649 denotes 144
32731428-15809906-71421342 1717-1720 15809906 denotes 145
32731428-27090992-71421343 1792-1795 27090992 denotes 146
32731428-6261640-71421344 1896-1899 6261640 denotes 147
32731428-15102999-71421345 1900-1903 15102999 denotes 148
32731428-15809906-71421346 1967-1970 15809906 denotes 145
32731428-16671039-71421347 1971-1974 16671039 denotes 149
32731428-15809896-71421348 1975-1978 15809896 denotes 150
32731428-27090992-71421349 1987-1990 27090992 denotes 146
32731428-25178651-71421350 1991-1994 25178651 denotes 151
32731428-25701855-71421351 1995-1998 25701855 denotes 152
32731428-32198275-71421352 2021-2024 32198275 denotes 154
32731428-32010938-71421353 2025-2028 32010938 denotes 155
32731428-32246849-71421354 2029-2032 32246849 denotes 156
32731428-32242113-71421355 2140-2143 32242113 denotes 157
32731428-32226084-71421356 2413-2416 32226084 denotes 158
32731428-32432461-71421357 3241-3244 32432461 denotes 160
32731428-32214924-71421358 3693-3696 32214924 denotes 161
32731428-21056645-71421359 3859-3862 21056645 denotes 162