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PMC:7417788 / 76351-76477 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T558 52-56 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1218 14-15 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T1219 52-56 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T1220 81-87 http://purl.obolibrary.org/obo/BFO_0000030 denotes object
T1221 106-107 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T437 0-126 Sentence denotes Then we added a column with the unique id (integer) cell barcode to the overlaps object and fed this into a sparseMatrix in R.