PMC:7417788 / 75359-75516 JSONTXT

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T1513","span":{"begin":33,"end":38},"obj":"SO:0000150"},{"id":"T1514","span":{"begin":83,"end":89},"obj":"SO:0001505"}],"text":"scATAC-seq processing\nscATAC-seq reads were aligned to the GRCh38 (hg38) reference genome and quantified using CellRanger-ATAC count (10x Genomics, v.1.0.0)."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T553","span":{"begin":83,"end":89},"obj":"Body_part"}],"attributes":[{"id":"A553","pred":"fma_id","subj":"T553","obj":"http://purl.org/sig/ont/fma/fma84116"}],"text":"scATAC-seq processing\nscATAC-seq reads were aligned to the GRCh38 (hg38) reference genome and quantified using CellRanger-ATAC count (10x Genomics, v.1.0.0)."}

{"project":"LitCovid-sentences","denotations":[{"id":"T429","span":{"begin":0,"end":21},"obj":"Sentence"},{"id":"T430","span":{"begin":22,"end":157},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"scATAC-seq processing\nscATAC-seq reads were aligned to the GRCh38 (hg38) reference genome and quantified using CellRanger-ATAC count (10x Genomics, v.1.0.0)."}

{"project":"LitCovid-PubTator","denotations":[{"id":"1505","span":{"begin":67,"end":71},"obj":"Gene"}],"attributes":[{"id":"A1505","pred":"tao:has_database_id","subj":"1505","obj":"Gene:8549"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"scATAC-seq processing\nscATAC-seq reads were aligned to the GRCh38 (hg38) reference genome and quantified using CellRanger-ATAC count (10x Genomics, v.1.0.0)."}