PMC:7417788 / 65202-65506 JSONTXT

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{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T470","span":{"begin":91,"end":95},"obj":"Body_part"},{"id":"T471","span":{"begin":163,"end":167},"obj":"Body_part"}],"attributes":[{"id":"A470","pred":"fma_id","subj":"T470","obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"A471","pred":"fma_id","subj":"T471","obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"The data was filtered, normalized, dimensionality was reduced, clustered, and differential gene expression analysis were performed after calculation of the single-cell expression matrix by CellRanger using Python (version 3.7.7) Scanpy (https://scanpy.readthedocs.io/en/stable/index.html, version 1.4.6)."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T1094","span":{"begin":91,"end":95},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T1095","span":{"begin":163,"end":167},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T1096","span":{"begin":267,"end":269},"obj":"http://purl.obolibrary.org/obo/CLO_0037161"}],"text":"The data was filtered, normalized, dimensionality was reduced, clustered, and differential gene expression analysis were performed after calculation of the single-cell expression matrix by CellRanger using Python (version 3.7.7) Scanpy (https://scanpy.readthedocs.io/en/stable/index.html, version 1.4.6)."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T55021","span":{"begin":267,"end":269},"obj":"Chemical"}],"attributes":[{"id":"A69156","pred":"chebi_id","subj":"T55021","obj":"http://purl.obolibrary.org/obo/CHEBI_30347"}],"text":"The data was filtered, normalized, dimensionality was reduced, clustered, and differential gene expression analysis were performed after calculation of the single-cell expression matrix by CellRanger using Python (version 3.7.7) Scanpy (https://scanpy.readthedocs.io/en/stable/index.html, version 1.4.6)."}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T296","span":{"begin":91,"end":106},"obj":"http://purl.obolibrary.org/obo/GO_0010467"}],"text":"The data was filtered, normalized, dimensionality was reduced, clustered, and differential gene expression analysis were performed after calculation of the single-cell expression matrix by CellRanger using Python (version 3.7.7) Scanpy (https://scanpy.readthedocs.io/en/stable/index.html, version 1.4.6)."}

{"project":"LitCovid-sentences","denotations":[{"id":"T362","span":{"begin":0,"end":304},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The data was filtered, normalized, dimensionality was reduced, clustered, and differential gene expression analysis were performed after calculation of the single-cell expression matrix by CellRanger using Python (version 3.7.7) Scanpy (https://scanpy.readthedocs.io/en/stable/index.html, version 1.4.6)."}