PMC:7414629 / 5065-5481
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T44 | 16-35 | Body_part | denotes | cerebrospinal fluid | http://purl.org/sig/ont/fma/fma20935 |
| T45 | 37-40 | Body_part | denotes | CSF | http://purl.org/sig/ont/fma/fma20935 |
| T46 | 51-55 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T47 | 74-85 | Body_part | denotes | lymphocytes | http://purl.org/sig/ont/fma/fma62863 |
| T48 | 90-99 | Body_part | denotes | monocytes | http://purl.org/sig/ont/fma/fma62864 |
| T49 | 102-109 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T50 | 124-131 | Body_part | denotes | glucose | http://purl.org/sig/ont/fma/fma82743 |
| T51 | 219-222 | Body_part | denotes | CSF | http://purl.org/sig/ont/fma/fma20935 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T25 | 16-35 | Body_part | denotes | cerebrospinal fluid | http://purl.obolibrary.org/obo/UBERON_0001359 |
| T26 | 340-348 | Body_part | denotes | pallidum | http://purl.obolibrary.org/obo/UBERON_0006514 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T46 | 198-206 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T47 | 305-314 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T48 | 320-328 | Disease | denotes | Borrelia | http://purl.obolibrary.org/obo/MONDO_0019632 |
| T49 | 404-415 | Disease | denotes | hepatitis E | http://purl.obolibrary.org/obo/MONDO_0005788 |
| T50 | 404-413 | Disease | denotes | hepatitis | http://purl.obolibrary.org/obo/MONDO_0002251 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T73 | 49-55 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a cell |
| T74 | 90-99 | http://purl.obolibrary.org/obo/CL_0000576 | denotes | monocytes |
| T75 | 241-247 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
| T76 | 269-274 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
| T77 | 296-297 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 160 | 198-208 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 161 | 330-348 | Species | denotes | Treponema pallidum | Tax:160 |
| 162 | 350-370 | Species | denotes | Campylobacter jejuni | Tax:197 |
| 163 | 389-393 | Species | denotes | HSV1 | Tax:10298 |
| 164 | 124-131 | Chemical | denotes | glucose | MESH:D005947 |
| 165 | 148-155 | Chemical | denotes | lactate | MESH:D019344 |
| 166 | 305-314 | Disease | denotes | infection | MESH:D007239 |
| 167 | 404-415 | Disease | denotes | hepatitis E | MESH:D016751 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T18 | 102-109 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T19 | 124-131 | Chemical | denotes | glucose | http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167 |
| T21 | 148-155 | Chemical | denotes | lactate | http://purl.obolibrary.org/obo/CHEBI_24996 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T25 | 404-413 | Phenotype | denotes | hepatitis | http://purl.obolibrary.org/obo/HP_0012115 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T44 | 0-193 | Sentence | denotes | The analysis of cerebrospinal fluid (CSF) showed a cell count of 9 Mpt/l (lymphocytes and monocytes), protein of 0.575 g/l, glucose 3.74 mmol/l and lactate 2.2 mmol/l, and no oligoclonal bands. |
| T45 | 194-257 | Sentence | denotes | The SARS-CoV-2 RT-PCR in CSF was performed and tested negative. |
| T46 | 258-416 | Sentence | denotes | Biological tests were not in favor of a recent infection with Borrelia, Treponema pallidum, Campylobacter jejuni, mycoplasma, EBV, HSV1 or 2, and hepatitis E. |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T90 | 16-35 | UBERON:0001359 | denotes | cerebrospinal fluid |
| T91 | 74-85 | CL:0000542 | denotes | lymphocytes |
| T92 | 90-99 | CL:0000576 | denotes | monocytes |
| T93 | 124-131 | CHEBI:37624;CHEBI:37624 | denotes | glucose |
| T94 | 148-155 | CHEBI:24996;CHEBI:24996 | denotes | lactate |
| T95 | 198-208 | SP_7 | denotes | SARS-CoV-2 |
| T96 | 320-328 | NCBITaxon:138 | denotes | Borrelia |
| T97 | 330-348 | NCBITaxon:160 | denotes | Treponema pallidum |
| T98 | 350-363 | NCBITaxon:197 | denotes | Campylobacter |
| T99 | 364-370 | NCBITaxon:6142 | denotes | jejuni |
| T100 | 384-387 | NCBITaxon:10376 | denotes | EBV |
| T101 | 389-393 | PR:Q02887 | denotes | HSV1 |