PMC:7405836 / 19678-20243
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T94033 | 33-41 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T32909 | 58-64 | Body_part | denotes | genome | http://purl.org/sig/ont/fma/fma84116 |
| T45672 | 133-141 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T74876 | 198-206 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T46810 | 276-284 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T13888 | 329-336 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T63748 | 372-379 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T48025 | 445-453 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T28902 | 486-496 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T176 | 47-55 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T177 | 47-51 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T178 | 288-296 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T179 | 288-292 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T180 | 298-306 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T181 | 298-302 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T45950 | 151-153 | http://purl.obolibrary.org/obo/CLO_0008339 | denotes | p6 |
| T38116 | 212-213 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T3669 | 250-252 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T74427 | 341-344 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T62291 | 345-346 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T80886 | 425-427 | http://purl.obolibrary.org/obo/CLO_0008339 | denotes | p6 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T110 | 33-41 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T111 | 133-141 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T112 | 198-206 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T113 | 276-284 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T114 | 329-336 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T115 | 372-379 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T116 | 445-453 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T117 | 486-496 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T118 | 486-491 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T119 | 492-496 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T35914 | 231-248 | http://purl.obolibrary.org/obo/GO_0019079 | denotes | viral replication |
| T63895 | 231-248 | http://purl.obolibrary.org/obo/GO_0019058 | denotes | viral replication |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T140 | 0-187 | Sentence | denotes | Besides the important structural proteins, the SARS-CoV-2 genome contains 15 nsps, nsp1 to nsp10 and nsp12 to nsp16, and 8 accessory proteins (3a, 3b, p6, 7a, 7b, 8b, 9b, and ORF14) (16). |
| T141 | 188-254 | Sentence | denotes | All these proteins play a specific role in viral replication (27). |
| T142 | 255-385 | Sentence | denotes | Unlike the accessory proteins of SARS-CoV, SARS-CoV-2 does not contain 8a protein and has a longer 8b and shorter 3b protein (16). |
| T143 | 386-565 | Sentence | denotes | The nsp7, nsp13, envelope, matrix, and p6 and 8b accessory proteins have not been detected with any amino acid substitutions compared to the sequences of other coronaviruses (16). |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 575 | 83-87 | Gene | denotes | nsp1 | Gene:10045 |
| 576 | 47-57 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 577 | 288-296 | Species | denotes | SARS-CoV | Tax:694009 |
| 578 | 298-308 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 579 | 546-559 | Species | denotes | coronaviruses | Tax:11118 |