PMC:7405836 / 13968-14197 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/7405836","sourcedb":"PMC","sourceid":"7405836","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7405836","text":"Remarkably, a difference between SARS-CoV-2 and other CoVs is the identification of a novel short putative protein within the ORF3 band, a secreted protein with an alpha helix and beta-sheet with six strands encoded by ORF8 (31).","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T20479","span":{"begin":107,"end":114},"obj":"Body_part"},{"id":"T27420","span":{"begin":148,"end":155},"obj":"Body_part"},{"id":"T61724","span":{"begin":170,"end":175},"obj":"Body_part"}],"attributes":[{"id":"A34445","pred":"fma_id","subj":"T20479","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A32054","pred":"fma_id","subj":"T27420","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A36531","pred":"fma_id","subj":"T61724","obj":"http://purl.org/sig/ont/fma/fma60992"},{"subj":"T20479","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T27420","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T61724","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T7","span":{"begin":170,"end":175},"obj":"Body_part"}],"attributes":[{"id":"A7","pred":"uberon_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/UBERON_0002488"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T146","span":{"begin":33,"end":41},"obj":"Disease"},{"id":"T147","span":{"begin":33,"end":37},"obj":"Disease"}],"attributes":[{"id":"A146","pred":"mondo_id","subj":"T146","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A147","pred":"mondo_id","subj":"T147","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T146","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T147","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T69107","span":{"begin":12,"end":13},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T67548","span":{"begin":84,"end":85},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T10115","span":{"begin":137,"end":138},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T69107","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T67548","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T10115","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T28","span":{"begin":107,"end":114},"obj":"Chemical"},{"id":"T29","span":{"begin":148,"end":155},"obj":"Chemical"},{"id":"T30","span":{"begin":164,"end":169},"obj":"Chemical"},{"id":"T31","span":{"begin":180,"end":184},"obj":"Chemical"}],"attributes":[{"id":"A28","pred":"chebi_id","subj":"T28","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A29","pred":"chebi_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A30","pred":"chebi_id","subj":"T30","obj":"http://purl.obolibrary.org/obo/CHEBI_30216"},{"id":"A31","pred":"chebi_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/CHEBI_10545"},{"subj":"T28","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T29","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T30","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T31","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T92","span":{"begin":0,"end":229},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T92","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"455","span":{"begin":219,"end":223},"obj":"Gene"},{"id":"458","span":{"begin":33,"end":43},"obj":"Species"},{"id":"459","span":{"begin":54,"end":58},"obj":"Species"}],"attributes":[{"id":"A455","pred":"tao:has_database_id","subj":"455","obj":"Gene:43740577"},{"id":"A458","pred":"tao:has_database_id","subj":"458","obj":"Tax:2697049"},{"id":"A459","pred":"tao:has_database_id","subj":"459","obj":"Tax:11118"},{"subj":"455","pred":"source","obj":"LitCovid-PubTator"},{"subj":"458","pred":"source","obj":"LitCovid-PubTator"},{"subj":"459","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#ecca93","default":true},{"id":"LitCovid-PD-UBERON","color":"#b093ec"},{"id":"LitCovid-PD-MONDO","color":"#93ec96"},{"id":"LitCovid-PD-CLO","color":"#ec93a9"},{"id":"LitCovid-PD-CHEBI","color":"#93c3ec"},{"id":"LitCovid-sentences","color":"#ddec93"},{"id":"LitCovid-PubTator","color":"#e093ec"}]}]}}