PMC:7402624 / 43407-44084 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7402624","sourcedb":"PMC","sourceid":"7402624","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7402624","text":"Spearman’s Rank Correlation coefficient (ρ) and p-value for each feature vs. Component 1 (C1) and Component 2 (C2) shown. (H) (Left) Spearman correlation between UMAP Components 1 and 2 and FlowSOM clusters. (Right) Select FlowSOM clusters and their protein expression. (I) Spearman correlation between UMAP Components 1 and 2 and clinical metadata. (J) Heatmap of immune parameters used to define Immunotype 3 indicated by row; disease severity and mortality indicated across top. (K) (Left) Transformed UMAP projection; patient status for Immunotype 3 indicated by color. (Right) Spearman correlation between Immunotype 3 and disease severity, mortality, and UMAP Components.","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T390","span":{"begin":250,"end":257},"obj":"Body_part"}],"attributes":[{"id":"A390","pred":"fma_id","subj":"T390","obj":"http://purl.org/sig/ont/fma/fma67257"},{"subj":"T390","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T710","span":{"begin":87,"end":93},"obj":"http://purl.obolibrary.org/obo/CLO_0054111"},{"id":"T711","span":{"begin":111,"end":113},"obj":"http://purl.obolibrary.org/obo/CLO_0002105"},{"id":"T712","span":{"begin":111,"end":113},"obj":"http://purl.obolibrary.org/obo/CLO_0051742"}],"attributes":[{"subj":"T710","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T711","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T712","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T301","span":{"begin":111,"end":113},"obj":"Chemical"},{"id":"T302","span":{"begin":250,"end":257},"obj":"Chemical"}],"attributes":[{"id":"A301","pred":"chebi_id","subj":"T301","obj":"http://purl.obolibrary.org/obo/CHEBI_30083"},{"id":"A302","pred":"chebi_id","subj":"T302","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"subj":"T301","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T302","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T250","span":{"begin":0,"end":677},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T250","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#d7ec93","default":true},{"id":"LitCovid-PD-CLO","color":"#e793ec"},{"id":"LitCovid-PD-CHEBI","color":"#93eccd"},{"id":"LitCovid-sentences","color":"#ecb393"}]}]}}