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PMC:7402624 / 38317-38717 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T352 70-74 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T353 183-188 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T354 381-384 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1360 56-59 Gene denotes CD8 Gene:925
1361 64-67 Gene denotes CD4 Gene:920
1362 169-172 Gene denotes CD8 Gene:925
1363 177-180 Gene denotes CD4 Gene:920
1371 230-238 Species denotes smallpox Tax:10255
1372 261-275 Species denotes vaccinia virus Tax:10245
1381 111-126 Disease denotes viral infection MESH:D001102
1382 202-218 Disease denotes viral infections MESH:D001102
1383 305-310 Disease denotes fever MESH:D005334
1384 349-364 Disease denotes virus infection MESH:D001102
1385 375-394 Disease denotes acute HIV infection MESH:D015658

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T294 111-126 Disease denotes viral infection http://purl.obolibrary.org/obo/MONDO_0005108
T295 117-126 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T296 202-218 Disease denotes viral infections http://purl.obolibrary.org/obo/MONDO_0005108
T297 230-238 Disease denotes smallpox http://purl.obolibrary.org/obo/MONDO_0004651
T298 261-269 Disease denotes vaccinia http://purl.obolibrary.org/obo/MONDO_0002595
T299 298-310 Disease denotes yellow fever http://purl.obolibrary.org/obo/MONDO_0020502
T300 339-348 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T301 349-364 Disease denotes virus infection http://purl.obolibrary.org/obo/MONDO_0005108
T302 355-364 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T303 381-394 Disease denotes HIV infection http://purl.obolibrary.org/obo/MONDO_0005109
T304 385-394 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T641 29-38 http://purl.obolibrary.org/obo/CLO_0001658 denotes activated
T642 56-59 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T643 64-67 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T644 68-74 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T645 169-172 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T646 177-180 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T647 181-188 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T648 270-275 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T649 323-326 http://purl.obolibrary.org/obo/CLO_0001134 denotes 17D
T650 328-330 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T651 349-354 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T652 396-398 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T79 111-126 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infection
T80 202-218 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infections

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T10 305-310 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T222 0-400 Sentence denotes The high and even increasing activated or proliferating CD8 and CD4 T cell responses over ~1 week during acute viral infection contrasted with the sharp peak of KI67 in CD8 and CD4 T cells during acute viral infections, including smallpox vaccination with live vaccinia virus (47), live attenuated yellow fever vaccine YFV-17D (48), acute influenza virus infection (49), and acute HIV infection (35).

2_test

Id Subject Object Predicate Lexical cue
32669297-18468462-135105213 277-279 18468462 denotes 47
32669297-29236685-135105214 328-330 29236685 denotes 48
32669297-22286307-135105215 366-368 22286307 denotes 49
32669297-26362266-135105216 396-398 26362266 denotes 35