PMC:7402624 / 18729-19063
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T132 | 299-314 | Body_part | denotes | germinal center | http://purl.org/sig/ont/fma/fma55224 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T9 | 299-314 | Body_part | denotes | germinal center | http://purl.obolibrary.org/obo/UBERON_0010754 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 682 | 123-128 | Gene | denotes | CXCR5 | Gene:643 |
| 683 | 174-178 | Gene | denotes | CD38 | Gene:952 |
| 684 | 179-183 | Gene | denotes | ICOS | Gene:29851 |
| 712 | 119-122 | Gene | denotes | PD1 | Gene:6622 |
| 713 | 58-67 | Species | denotes | SARS-CoV2 | Tax:2697049 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T141 | 58-62 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T315 | 69-71 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T316 | 112-118 | http://purl.obolibrary.org/obo/PR_000001015 | denotes | CD45RA |
| T317 | 138-140 | http://purl.obolibrary.org/obo/CLO_0001313 | denotes | 36 |
| T318 | 147-156 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activated |
| T319 | 174-178 | http://purl.obolibrary.org/obo/PR_000001408 | denotes | CD38 |
| T320 | 186-195 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activated |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T95 | 119-122 | Chemical | denotes | PD1 | http://purl.obolibrary.org/obo/CHEBI_138655 |
| T96 | 257-264 | Chemical | denotes | antigen | http://purl.obolibrary.org/obo/CHEBI_59132 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T118 | 0-334 | Sentence | denotes | Given the potential role of antibodies in the response to SARS-CoV2 (27, 29), we also analyzed circulating Tfh (CD45RA−PD1+CXCR5+ [cTfh] (36)) and activated circulating Tfh (CD38+ICOS+ [activated cTfh]), the latter of which may be more reflective of recent antigen encounter and emigration from the germinal center (37, 38) (Fig. 3A). |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32669297-32267220-135105200 | 69-71 | 32267220 | denotes | 27 |
| 32669297-32413330-135105201 | 73-75 | 32413330 | denotes | 29 |
| 32669297-31117010-135105202 | 138-140 | 31117010 | denotes | 36 |
| 32669297-25172499-135105203 | 320-322 | 25172499 | denotes | 38 |