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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T1 44-52 SP_7 denotes COVID-19
T2 122-133 NCBITaxon:11118 denotes Coronavirus
T3 148-156 SP_7 denotes COVID-19
T4 169-181 SP_7 denotes severe acute
T5 182-193 SP_7;UBERON:0001004 denotes respiratory
T6 194-216 SP_7 denotes syndrome coronavirus 2
T7 218-228 SP_7 denotes SARS-CoV-2
T8 260-265 UBERON:0010230 denotes globe
T9 304-308 SP_10 denotes SARS
T10 374-380 NCBITaxon:4751 denotes fungal
T11 418-426 SP_7 denotes COVID-19
T12 497-505 SP_7 denotes COVID-19
T13 640-647 NCBITaxon:5478 denotes Candida
T14 662-670 SP_7 denotes COVID-19
T15 820-826 CHEBI:37671;CHEBI:37671 denotes glucan
T16 828-841 CHEBI:27680;CHEBI:27680 denotes galactomannan
T17 1110-1118 SP_7 denotes COVID-19
T18 1314-1322 SP_7 denotes COVID-19
T19 1359-1367 SP_7 denotes COVID-19
T20 1419-1424 SP_6;NCBITaxon:9606 denotes human
T21 1428-1433 SP_6;NCBITaxon:9606 denotes human
T22 1455-1466 NCBITaxon:11118 denotes coronavirus
T23 1481-1489 SP_7 denotes COVID-19
T24 1502-1514 SP_7 denotes severe acute
T25 1515-1526 SP_7;UBERON:0001004 denotes respiratory
T26 1527-1549 SP_7 denotes syndrome coronavirus 2
T27 1551-1561 SP_7 denotes SARS-CoV-2
T28 1647-1655 SP_7 denotes COVID-19
T29 1769-1775 GO:0016265 denotes deaths
T30 1791-1799 SP_10 denotes SARS-CoV
T31 1804-1848 SP_9 denotes Middle East Respiratory Syndrome Coronavirus
T32 1850-1858 SP_9 denotes MERS-CoV
T33 1861-1871 SP_7 denotes SARS-CoV-2
T34 1897-1908 UBERON:0001004 denotes respiratory
T35 2003-2011 UBERON:0003215 denotes alveolar
T36 2055-2063 SP_7 denotes COVID-19
T37 2085-2102 CHEBI:35705;CHEBI:35705 denotes immunosuppression
T38 2122-2125 PR:000001004 denotes CD4
T39 2140-2147 CL:0000084 denotes T cells
T40 2227-2246 UBERON:0007221 denotes intensive care unit
T41 2387-2393 NCBITaxon:4751 denotes fungal
T42 2451-2459 SP_7 denotes COVID-19
T43 2489-2495 NCBITaxon:4751 denotes fungal
T44 2635-2643 SP_7 denotes COVID-19
T45 2681-2687 NCBITaxon:4751 denotes fungal
T46 2705-2713 SP_7 denotes COVID-19
T47 2800-2805 NCBITaxon:4751 denotes fungi
T48 2811-2817 NCBITaxon:4751 denotes fungus
T49 2823-2829 NCBITaxon:4751 denotes fungal
T50 2854-2860 NCBITaxon:4751 denotes fungal
T51 2901-2909 SP_7 denotes COVID-19
T52 2915-2925 SP_7 denotes SARS-CoV-2
T53 2931-2940 SP_7 denotes 2019-nCoV
T54 2957-2968 NCBITaxon:11118 denotes coronavirus
T55 3331-3337 NCBITaxon:4751 denotes fungal
T56 3447-3455 SP_7 denotes COVID-19
T57 3561-3566 NCBITaxon:4751 denotes fungi
T58 3629-3637 SP_7 denotes COVID-19
T59 3695-3701 NCBITaxon:4751 denotes fungal
T60 3735-3746 NCBITaxon:5478 denotes Aspergillus
T61 3747-3753 NCBITaxon:5059 denotes flavus
T62 3767-3783 NCBITaxon:5478 denotes Candida glabrata
T63 3803-3805 NCBITaxon:7719 denotes C.
T64 3806-3814 NCBITaxon:8296 denotes albicans
T65 3870-3876 NCBITaxon:4751 denotes fungal
T66 3943-3954 NCBITaxon:31032 denotes . fumigatus
T67 3959-3961 NCBITaxon:7719 denotes C.
T68 3962-3970 NCBITaxon:8296 denotes albicans
T69 4062-4070 SP_7 denotes COVID-19
T70 4115-4124 NCBITaxon:2 denotes bacterial
T71 4128-4134 NCBITaxon:4751 denotes fungal
T72 4234-4244 CHEBI:67079;CHEBI:67079 denotes antifungal
T73 4375-4381 NCBITaxon:4751 denotes fungal
T74 4518-4526 SP_7 denotes COVID-19
T75 4547-4556 UBERON:0002048 denotes pulmonary
T76 4859-4867 SP_7 denotes COVID-19
T77 4898-4901 NCBITaxon:9606 denotes man
T78 4936-4944 UBERON:0003126 denotes tracheal
T79 5003-5011 SP_7 denotes COVID-19
T80 5046-5050 SP_10 denotes SARS
T81 5089-5097 SP_10 denotes SARS-CoV
T82 5102-5112 SP_7 denotes SARS-CoV-2
T83 5132-5139 NCBITaxon:species denotes species
T84 5235-5239 SP_10 denotes SARS
T85 5275-5281 NCBITaxon:4751 denotes fungal
T86 5295-5299 SP_10 denotes SARS
T87 5403-5409 NCBITaxon:4751 denotes fungal
T88 5442-5447 GO:0016265 denotes death
T89 5452-5456 SP_10 denotes SARS
T90 5508-5513 GO:0016265 denotes death
T91 5631-5637 NCBITaxon:4751 denotes fungal
T92 5903-5909 NCBITaxon:4751 denotes fungal
T93 5926-5934 SP_7 denotes COVID-19
T94 6028-6036 SP_7 denotes COVID-19
T95 6062-6068 UBERON:0007311 denotes sputum
T96 6069-6075 NCBITaxon:4751 denotes fungal
T97 6141-6147 NCBITaxon:4751 denotes fungus
T98 6162-6168 UBERON:0007311 denotes sputum
T99 6169-6175 NCBITaxon:4751 denotes fungal
T100 6255-6266 UBERON:0001004 denotes respiratory
T101 6279-6287 SP_7 denotes COVID-19
T102 6338-6347 NCBITaxon:2 denotes bacterium
T103 6414-6425 CHEBI:33282;CHEBI:33282 denotes antibiotics
T104 6450-6456 NCBITaxon:4751 denotes fungal
T105 6526-6530 SP_10 denotes SARS
T106 6677-6685 SP_7 denotes COVID-19
T107 6701-6707 NCBITaxon:4751 denotes fungal
T108 6760-6768 SP_7 denotes COVID-19
T109 6821-6829 SP_7 denotes COVID-19
T110 6875-6881 NCBITaxon:4751 denotes fungal
T111 6980-6986 NCBITaxon:4751 denotes fungal
T112 7000-7008 SP_7 denotes COVID-19
T113 7109-7117 SP_7 denotes COVID-19
T114 7175-7181 NCBITaxon:4751 denotes fungal
T115 7292-7306 UBERON:0000922 denotes extrapulmonary
T116 7307-7313 NCBITaxon:4751 denotes fungal
T117 7355-7360 UBERON:0001443 denotes chest
T118 7430-7436 NCBITaxon:4751 denotes fungal
T119 7447-7459 GO:0065007 denotes surveillance
T120 7568-7575 CHEBI:59132;CHEBI:59132 denotes antigen
T121 7580-7588 GO:0042571 denotes antibody
T122 7600-7606 CHEBI:37671;CHEBI:37671 denotes glucan
T123 7654-7659 UBERON:0001977 denotes serum
T124 7718-7733 UBERON:0002186;BV_4 denotes bronchoalveolar
T125 7734-7740 BV_4;UBERON:0004821 denotes lavage
T126 7741-7746 BV_4;UBERON:0006314 denotes fluid
T127 7748-7752 UBERON:0001348;BV_4 denotes BALF
T128 7758-7766 UBERON:0003126 denotes tracheal
T129 8230-8246 CHEBI:86327;CHEBI:86327 denotes antifungal drugs
T130 8325-8331 NCBITaxon:4751 denotes fungal
T131 8346-8352 NCBITaxon:4751 denotes fungal
T132 8377-8385 SP_7 denotes COVID-19
T133 8399-8410 NCBITaxon:5052 denotes Aspergillus
T134 8415-8422 NCBITaxon:5478 denotes Candida
T135 8466-8472 NCBITaxon:4751 denotes fungus
T136 8480-8484 UBERON:0002048 denotes lung
T137 8585-8596 NCBITaxon:5052 denotes Aspergillus
T138 8597-8604 NCBITaxon:species denotes species
T139 8636-8640 UBERON:0000104 denotes life
T140 8666-8674 SP_7 denotes COVID-19
T141 8832-8841 UBERON:0002048 denotes pulmonary
T142 8869-8882 GO:0030097;CL:0000037 denotes hematopoietic
T143 8883-8892 CL:0000037 denotes stem cell
T144 8928-8933 UBERON:0000062 denotes organ
T145 8987-8998 GO:0030097 denotes hemopoietic
T146 9196-9200 UBERON:0002048 denotes lung
T147 9250-9261 GO:0050817 denotes coagulation
T148 9282-9293 UBERON:0001004 denotes respiratory
T149 9384-9388 UBERON:0002048 denotes lung
T150 9389-9394 UBERON:0006314 denotes fluid
T151 9398-9404 UBERON:0000479 denotes tissue
T152 9412-9418 NCBITaxon:4751 denotes fungal
T153 9516-9527 NCBITaxon:5052 denotes Aspergillus
T154 9555-9566 CHEBI:17790;CHEBI:17790 denotes methenamine
T155 9590-9603 CHEBI:29149;CHEBI:29149 denotes periodic acid
T156 9633-9639 UBERON:0000479 denotes tissue
T157 9691-9702 NCBITaxon:5052 denotes Aspergillus
T158 9731-9736 NCBITaxon:4751 denotes fungi
T159 9745-9753 NCBITaxon:5506 denotes Fusarium
T160 9754-9758 NCBITaxon:species denotes spp.
T161 9763-9775 NCBITaxon:286 denotes Scedosporium
T162 9776-9779 NCBITaxon:species denotes spp
T163 10057-10068 NCBITaxon:5052 denotes Aspergillus
T164 10100-10106 NCBITaxon:4751 denotes fungal
T165 10184-10195 NCBITaxon:5052 denotes Aspergillus
T166 10457-10466 GO:0005840 denotes ribosomal
T167 10522-10533 NCBITaxon:5052 denotes Aspergillus
T168 10537-10544 UBERON:0000479 denotes tissues
T169 10548-10552 BV_4 denotes BALF
T170 10604-10615 NCBITaxon:5052 denotes Aspergillus
T171 10616-10619 NCBITaxon:species denotes spp
T172 10625-10631 PR:000006147 denotes CYP51A
T173 10656-10657 NCBITaxon:8296 denotes A
T174 10657-10668 NCBITaxon:31032 denotes . fumigatus
T175 10777-10785 CHEBI:33893;CHEBI:33893 denotes reagents
T176 10815-10820 UBERON:0001977 denotes serum
T177 10825-10829 BV_4 denotes BALF
T178 11061-11066 UBERON:0000178 denotes blood
T179 11111-11122 UBERON:0001004 denotes respiratory
T180 11432-11437 CHEBI:23888;CHEBI:23888 denotes drugs
T181 11498-11507 CHEBI:35727;CHEBI:35727 denotes triazoles
T182 11509-11521 CHEBI:6076;CHEBI:6076 denotes itraconazole
T183 11523-11535 CHEBI:10023;CHEBI:10023 denotes voriconazole
T184 11537-11549 CHEBI:64355;CHEBI:64355 denotes posaconazole
T185 11565-11579 CHEBI:2682;CHEBI:2682 denotes Amphotericin B
T186 11671-11679 CHEBI:35727;CHEBI:35727 denotes triazole
T187 11680-11685 CHEBI:23888;CHEBI:23888 denotes drugs
T188 11720-11724 CHEBI:23888;CHEBI:23888 denotes drug
T189 11785-11791 CHEBI:68452;CHEBI:68452 denotes azoles
T190 11802-11807 CHEBI:23888;CHEBI:23888 denotes drugs
T191 11878-11886 SP_7 denotes COVID-19
T192 11956-11975 CHEBI:36047;CHEBI:36047 denotes antibacterial drugs
T193 12090-12096 UBERON:0002405 denotes immune
T194 12144-12151 NCBITaxon:5478 denotes Candida
T195 12152-12159 NCBITaxon:species denotes species
T196 12257-12262 UBERON:0000178 denotes blood
T197 12412-12418 CHEBI:37684;CHEBI:37684 denotes mannan
T198 12434-12437 GO:0071735 denotes IgG
T199 12445-12447 NCBITaxon:7719 denotes C.
T200 12448-12456 NCBITaxon:8296 denotes albicans
T201 12467-12475 GO:0042571 denotes antibody
T202 12623-12628 UBERON:0000178 denotes blood
T203 12659-12664 UBERON:0000178 denotes blood
T204 12913-12920 NCBITaxon:5475 denotes Candida
T205 13065-13072 NCBITaxon:5478 denotes Candida
T206 13103-13108 UBERON:0000178 denotes blood
T207 13273-13282 GO:0005618 denotes cell wall
T208 13298-13305 NCBITaxon:5478 denotes Candida
T209 13326-13331 NCBITaxon:4751 denotes fungi
T210 13343-13355 NCBITaxon:106841 denotes Cryptococcus
T211 13356-13363 NCBITaxon:species denotes species
T212 13365-13376 NCBITaxon:229219 denotes Blastomyces
T213 13377-13384 NCBITaxon:species denotes species
T214 13390-13399 NCBITaxon:10090 denotes Mucorales
T215 13468-13473 UBERON:0001977 denotes serum
T216 13506-13513 NCBITaxon:5478 denotes Candida
T217 13524-13529 NCBITaxon:4751 denotes fungi
T218 13545-13551 CHEBI:37684;CHEBI:37684 denotes mannan
T219 13567-13570 GO:0071735 denotes IgG
T220 13684-13690 CHEBI:37684;CHEBI:37684 denotes mannan
T221 13940-13947 NCBITaxon:5475 denotes Candida
T222 14084-14091 NCBITaxon:5478 denotes Candida
T223 14426-14431 UBERON:0000178 denotes blood
T224 14848-14853 UBERON:0000178 denotes blood
T225 14853-14860 UBERON:0006314 denotes -stream
T226 14891-14898 NCBITaxon:5478 denotes Candida
T227 14899-14907 SO:0001060 denotes isolates
T228 14924-14935 NCBITaxon:5478 denotes C. glabrata
T229 14939-14941 NCBITaxon:5478 denotes C.
T230 14942-14954 NCBITaxon:7656 denotes parapsilosis
T231 15287-15299 CHEBI:57248;CHEBI:57248 denotes echinocandin
T232 15354-15365 CHEBI:46081;CHEBI:46081 denotes fluconazole
T233 15367-15379 CHEBI:10023;CHEBI:10023 denotes voriconazole
T234 15381-15393 CHEBI:6076;CHEBI:6076 denotes itraconazole
T235 15400-15414 CHEBI:2682;CHEBI:2682 denotes Amphotericin B
T236 15455-15461 CHEBI:68452;CHEBI:68452 denotes azoles
T237 15541-15549 SP_7 denotes COVID-19
T238 15823-15829 UBERON:0007311 denotes sputum
T239 15831-15835 BV_4 denotes BALF
T240 15976-15985 CHEBI:26130;CHEBI:26130 denotes pigmented
T241 16001-16007 UBERON:0000479 denotes tissue
T242 16036-16042 UBERON:0000479 denotes tissue
T243 16065-16076 CHEBI:51686;CHEBI:51686 denotes hematoxylin
T244 16174-16179 NCBITaxon:genus denotes genus
T245 16184-16191 NCBITaxon:species denotes species
T246 16395-16400 NCBITaxon:4751 denotes fungi
T247 16437-16442 SO:0000704 denotes genes
T248 16669-16674 NCBITaxon:4751 denotes fungi
T249 16683-16688 UBERON:0001977 denotes serum
T250 16709-16720 UBERON:0006314 denotes body fluids
T251 16748-16754 UBERON:0000479 denotes tissue
T252 17461-17473 CHEBI:64355;CHEBI:64355 denotes posaconazole
T253 17494-17508 CHEBI:2682;CHEBI:2682 denotes Amphotericin B
T254 17509-17514 CHEBI:18059;CHEBI:18059 denotes lipid
T255 17515-17522 GO:0032991 denotes complex
T256 17534-17548 CHEBI:2682;CHEBI:2682 denotes Amphotericin B
T257 17553-17565 CHEBI:64355;CHEBI:64355 denotes posaconazole
T258 17566-17570 UBERON:0000165 denotes oral
T259 17642-17655 CHEBI:85979;CHEBI:85979 denotes isavuconazole
T260 17783-17791 CHEBI:48121;CHEBI:48121 denotes polyenes
T261 17796-17802 CHEBI:68452;CHEBI:68452 denotes azoles
T262 17806-17814 CHEBI:48121;CHEBI:48121 denotes polyenes
T263 17820-17833 CHEBI:57248;CHEBI:57248 denotes echinocandins
T264 17860-17868 SP_7 denotes COVID-19
T265 17883-17888 SP_6;NCBITaxon:9606 denotes human
T266 17906-17911 NCBITaxon:10239 denotes virus
T267 17943-17946 PR:000001004 denotes CD4
T268 17949-17961 CL:0000084 denotes T-lymphocyte
T269 18009-18015 UBERON:0002405 denotes immune
T270 18205-18217 NCBITaxon:106841 denotes Cryptococcus
T271 18218-18225 NCBITaxon:species denotes species
T272 18236-18238 NCBITaxon:7719 denotes C.
T273 18239-18249 NCBITaxon:5478 denotes neoformans
T274 18254-18256 NCBITaxon:7719 denotes C.
T275 18257-18263 NCBITaxon:5478 denotes gattii
T276 18264-18271 NCBITaxon:species denotes species
T277 18547-18566 UBERON:0001359 denotes cerebrospinal fluid
T278 18568-18571 UBERON:0001359 denotes CSF
T279 18668-18680 NCBITaxon:106841 denotes Cryptococcus
T280 18698-18705 GO:0007114 denotes budding
T281 18807-18811 CHEBI:2509;CHEBI:2509 denotes agar
T282 18968-18972 GO:0040007 denotes grow
T283 19031-19046 CHEBI:18154;CHEBI:18154 denotes polysaccharides
T284 19099-19110 UBERON:0006314 denotes body fluids
T285 19119-19124 UBERON:0001977 denotes serum
T286 19152-19158 UBERON:0000479 denotes tissue
T287 19190-19197 CHEBI:59132;CHEBI:59132 denotes antigen
T288 19199-19203 PR:000003817 denotes CrAg
T289 19444-19455 UBERON:0001004 denotes respiratory
T290 19479-19492 UBERON:0001087 denotes pleural fluid
T291 19497-19503 UBERON:0007311 denotes sputum
T292 19700-19706 NCBITaxon:4751 denotes fungal
T293 19887-19906 UBERON:0001359 denotes cerebrospinal fluid
T294 19936-19943 CHEBI:59132;CHEBI:59132 denotes antigen
T295 20021-20043 UBERON:0001017 denotes central nervous system
T296 20224-20230 UBERON:0007023 denotes adults
T297 20458-20472 CHEBI:2682;CHEBI:2682 denotes amphotericin B
T298 20492-20503 CHEBI:5100;CHEBI:5100 denotes flucytosine
T299 20517-20528 CHEBI:46081;CHEBI:46081 denotes fluconazole
T300 20554-20565 CHEBI:46081;CHEBI:46081 denotes fluconazole
T301 20568-20579 CHEBI:5100;CHEBI:5100 denotes flucytosine
T302 20583-20597 CHEBI:2682;CHEBI:2682 denotes amphotericin B
T303 20598-20610 CHEBI:23614;CHEBI:23614 denotes deoxycholate
T304 20613-20624 CHEBI:46081;CHEBI:46081 denotes fluconazole
T305 20655-20666 CHEBI:46081;CHEBI:46081 denotes fluconazole
T306 20723-20734 CHEBI:46081;CHEBI:46081 denotes fluconazole
T307 20784-20788 SP_10 denotes SARS
T308 20854-20860 NCBITaxon:4751 denotes fungal
T309 20898-20906 SP_7 denotes COVID-19
T310 20954-20958 UBERON:0000104 denotes life
T311 20991-20999 SP_7 denotes COVID-19
T312 21016-21030 GO:0010467 denotes overexpression
T313 21085-21091 UBERON:0002405;GO:0006955 denotes immune
T314 21092-21100 GO:0006955 denotes response
T315 21116-21119 PR:000001004 denotes CD4
T316 21122-21123 CL:0000084 denotes T
T317 21134-21140 CL:0000084 denotes T cell
T318 21182-21188 NCBITaxon:4751 denotes fungal
T319 21213-21221 SP_7 denotes COVID-19
T320 21402-21408 NCBITaxon:4751 denotes fungal
T321 21542-21548 CHEBI:37671;CHEBI:37671 denotes glucan
T322 21550-21563 CHEBI:27680;CHEBI:27680 denotes galactomannan
T323 21875-21883 SP_7 denotes COVID-19
T324 22093-22101 SP_7 denotes COVID-19
T325 22167-22173 NCBITaxon:4751 denotes fungal
T10086 44-52 SP_7 denotes COVID-19
T16221 122-133 NCBITaxon:11118 denotes Coronavirus
T65240 148-156 SP_7 denotes COVID-19
T78096 169-181 SP_7 denotes severe acute
T82615 182-193 SP_7;UBERON:0001004 denotes respiratory
T14104 194-216 SP_7 denotes syndrome coronavirus 2
T83515 218-228 SP_7 denotes SARS-CoV-2
T43579 260-265 UBERON:0010230 denotes globe
T36768 304-308 SP_10 denotes SARS
T42098 374-380 NCBITaxon:4751 denotes fungal
T17484 418-426 SP_7 denotes COVID-19
T57767 497-505 SP_7 denotes COVID-19
T60348 640-647 NCBITaxon:5478 denotes Candida
T22798 662-670 SP_7 denotes COVID-19
T99559 820-826 CHEBI:37671;CHEBI:37671 denotes glucan
T14011 828-841 CHEBI:27680;CHEBI:27680 denotes galactomannan
T74587 1110-1118 SP_7 denotes COVID-19
T75612 1314-1322 SP_7 denotes COVID-19
T52117 1359-1367 SP_7 denotes COVID-19
T87926 1419-1424 SP_6;NCBITaxon:9606 denotes human
T44317 1428-1433 SP_6;NCBITaxon:9606 denotes human
T51260 1455-1466 NCBITaxon:11118 denotes coronavirus
T60002 1481-1489 SP_7 denotes COVID-19
T53048 1502-1514 SP_7 denotes severe acute
T10983 1515-1526 SP_7;UBERON:0001004 denotes respiratory
T18020 1527-1549 SP_7 denotes syndrome coronavirus 2
T39408 1551-1561 SP_7 denotes SARS-CoV-2
T58688 1647-1655 SP_7 denotes COVID-19
T97901 1769-1775 GO:0016265 denotes deaths
T15306 1791-1799 SP_10 denotes SARS-CoV
T84834 1804-1848 SP_9 denotes Middle East Respiratory Syndrome Coronavirus
T47132 1850-1858 SP_9 denotes MERS-CoV
T93587 1861-1871 SP_7 denotes SARS-CoV-2
T30768 1897-1908 UBERON:0001004 denotes respiratory
T38817 2003-2011 UBERON:0003215 denotes alveolar
T68441 2055-2063 SP_7 denotes COVID-19
T85434 2085-2102 CHEBI:35705;CHEBI:35705 denotes immunosuppression
T96661 2122-2125 PR:000001004 denotes CD4
T91572 2140-2147 CL:0000084 denotes T cells
T27673 2227-2246 UBERON:0007221 denotes intensive care unit
T544 2387-2393 NCBITaxon:4751 denotes fungal
T63230 2451-2459 SP_7 denotes COVID-19
T67064 2489-2495 NCBITaxon:4751 denotes fungal
T8796 2635-2643 SP_7 denotes COVID-19
T90164 2681-2687 NCBITaxon:4751 denotes fungal
T78055 2705-2713 SP_7 denotes COVID-19
T56392 2800-2805 NCBITaxon:4751 denotes fungi
T2937 2811-2817 NCBITaxon:4751 denotes fungus
T7625 2823-2829 NCBITaxon:4751 denotes fungal
T97506 2854-2860 NCBITaxon:4751 denotes fungal
T76564 2901-2909 SP_7 denotes COVID-19
T86195 2915-2925 SP_7 denotes SARS-CoV-2
T83106 2931-2940 SP_7 denotes 2019-nCoV
T55582 2957-2968 NCBITaxon:11118 denotes coronavirus
T74928 3331-3337 NCBITaxon:4751 denotes fungal
T11317 3447-3455 SP_7 denotes COVID-19
T56598 3561-3566 NCBITaxon:4751 denotes fungi
T39068 3629-3637 SP_7 denotes COVID-19
T91984 3695-3701 NCBITaxon:4751 denotes fungal
T17638 3735-3746 NCBITaxon:5478 denotes Aspergillus
T7070 3747-3753 NCBITaxon:5059 denotes flavus
T19630 3767-3783 NCBITaxon:5478 denotes Candida glabrata
T48978 3803-3805 NCBITaxon:7719 denotes C.
T7397 3806-3814 NCBITaxon:8296 denotes albicans
T45290 3870-3876 NCBITaxon:4751 denotes fungal
T26007 3943-3954 NCBITaxon:31032 denotes . fumigatus
T92391 3959-3961 NCBITaxon:7719 denotes C.
T56812 3962-3970 NCBITaxon:8296 denotes albicans
T69365 4062-4070 SP_7 denotes COVID-19
T51502 4115-4124 NCBITaxon:2 denotes bacterial
T90238 4128-4134 NCBITaxon:4751 denotes fungal
T79560 4234-4244 CHEBI:67079;CHEBI:67079 denotes antifungal
T75018 4375-4381 NCBITaxon:4751 denotes fungal
T97810 4518-4526 SP_7 denotes COVID-19
T20972 4547-4556 UBERON:0002048 denotes pulmonary
T48370 4859-4867 SP_7 denotes COVID-19
T46953 4898-4901 NCBITaxon:9606 denotes man
T47229 4936-4944 UBERON:0003126 denotes tracheal
T77460 5003-5011 SP_7 denotes COVID-19
T56850 5046-5050 SP_10 denotes SARS
T86863 5089-5097 SP_10 denotes SARS-CoV
T60286 5102-5112 SP_7 denotes SARS-CoV-2
T57732 5132-5139 NCBITaxon:species denotes species
T69834 5235-5239 SP_10 denotes SARS
T84369 5275-5281 NCBITaxon:4751 denotes fungal
T84656 5295-5299 SP_10 denotes SARS
T42725 5403-5409 NCBITaxon:4751 denotes fungal
T88855 5442-5447 GO:0016265 denotes death
T81728 5452-5456 SP_10 denotes SARS
T66940 5508-5513 GO:0016265 denotes death
T72808 5631-5637 NCBITaxon:4751 denotes fungal
T30378 5903-5909 NCBITaxon:4751 denotes fungal
T91266 5926-5934 SP_7 denotes COVID-19
T74260 6028-6036 SP_7 denotes COVID-19
T87614 6062-6068 UBERON:0007311 denotes sputum
T92792 6069-6075 NCBITaxon:4751 denotes fungal
T10340 6141-6147 NCBITaxon:4751 denotes fungus
T29468 6162-6168 UBERON:0007311 denotes sputum
T4556 6169-6175 NCBITaxon:4751 denotes fungal
T20591 6255-6266 UBERON:0001004 denotes respiratory
T40802 6279-6287 SP_7 denotes COVID-19
T50213 6338-6347 NCBITaxon:2 denotes bacterium
T94044 6414-6425 CHEBI:33282;CHEBI:33282 denotes antibiotics
T11732 6450-6456 NCBITaxon:4751 denotes fungal
T29511 6526-6530 SP_10 denotes SARS
T75773 6677-6685 SP_7 denotes COVID-19
T11524 6701-6707 NCBITaxon:4751 denotes fungal
T59922 6760-6768 SP_7 denotes COVID-19
T57253 6821-6829 SP_7 denotes COVID-19
T6252 6875-6881 NCBITaxon:4751 denotes fungal
T23292 6980-6986 NCBITaxon:4751 denotes fungal
T24130 7000-7008 SP_7 denotes COVID-19
T77495 7109-7117 SP_7 denotes COVID-19
T35520 7175-7181 NCBITaxon:4751 denotes fungal
T39402 7292-7306 UBERON:0000922 denotes extrapulmonary
T42455 7307-7313 NCBITaxon:4751 denotes fungal
T86981 7355-7360 UBERON:0001443 denotes chest
T59688 7430-7436 NCBITaxon:4751 denotes fungal
T73764 7447-7459 GO:0065007 denotes surveillance
T74324 7568-7575 CHEBI:59132;CHEBI:59132 denotes antigen
T30906 7580-7588 GO:0042571 denotes antibody
T87476 7600-7606 CHEBI:37671;CHEBI:37671 denotes glucan
T49156 7654-7659 UBERON:0001977 denotes serum
T64926 7718-7733 UBERON:0002186;BV_4 denotes bronchoalveolar
T36463 7734-7740 BV_4;UBERON:0004821 denotes lavage
T72964 7741-7746 BV_4;UBERON:0006314 denotes fluid
T64314 7748-7752 UBERON:0001348;BV_4 denotes BALF
T62571 7758-7766 UBERON:0003126 denotes tracheal
T91278 8230-8246 CHEBI:86327;CHEBI:86327 denotes antifungal drugs
T63409 8325-8331 NCBITaxon:4751 denotes fungal
T27949 8346-8352 NCBITaxon:4751 denotes fungal
T13669 8377-8385 SP_7 denotes COVID-19
T90008 8399-8410 NCBITaxon:5052 denotes Aspergillus
T66500 8415-8422 NCBITaxon:5478 denotes Candida
T99249 8466-8472 NCBITaxon:4751 denotes fungus
T35314 8480-8484 UBERON:0002048 denotes lung
T1659 8585-8596 NCBITaxon:5052 denotes Aspergillus
T58904 8597-8604 NCBITaxon:species denotes species
T47255 8636-8640 UBERON:0000104 denotes life
T51772 8666-8674 SP_7 denotes COVID-19
T67109 8832-8841 UBERON:0002048 denotes pulmonary
T39323 8869-8882 GO:0030097;CL:0000037 denotes hematopoietic
T49768 8883-8892 CL:0000037 denotes stem cell
T85989 8928-8933 UBERON:0000062 denotes organ
T29170 8987-8998 GO:0030097 denotes hemopoietic
T75320 9196-9200 UBERON:0002048 denotes lung
T86222 9250-9261 GO:0050817 denotes coagulation
T89145 9282-9293 UBERON:0001004 denotes respiratory
T69728 9384-9388 UBERON:0002048 denotes lung
T44415 9389-9394 UBERON:0006314 denotes fluid
T93439 9398-9404 UBERON:0000479 denotes tissue
T55053 9412-9418 NCBITaxon:4751 denotes fungal
T56389 9516-9527 NCBITaxon:5052 denotes Aspergillus
T23187 9555-9566 CHEBI:17790;CHEBI:17790 denotes methenamine
T71536 9590-9603 CHEBI:29149;CHEBI:29149 denotes periodic acid
T44220 9633-9639 UBERON:0000479 denotes tissue
T96980 9691-9702 NCBITaxon:5052 denotes Aspergillus
T35360 9731-9736 NCBITaxon:4751 denotes fungi
T33859 9745-9753 NCBITaxon:5506 denotes Fusarium
T11824 9754-9758 NCBITaxon:species denotes spp.
T13465 9763-9775 NCBITaxon:286 denotes Scedosporium
T11097 9776-9779 NCBITaxon:species denotes spp
T71196 10057-10068 NCBITaxon:5052 denotes Aspergillus
T95830 10100-10106 NCBITaxon:4751 denotes fungal
T31042 10184-10195 NCBITaxon:5052 denotes Aspergillus
T44167 10457-10466 GO:0005840 denotes ribosomal
T80438 10522-10533 NCBITaxon:5052 denotes Aspergillus
T62724 10537-10544 UBERON:0000479 denotes tissues
T23730 10548-10552 BV_4 denotes BALF
T49081 10604-10615 NCBITaxon:5052 denotes Aspergillus
T81108 10616-10619 NCBITaxon:species denotes spp
T34970 10625-10631 PR:000006147 denotes CYP51A
T26672 10656-10657 NCBITaxon:8296 denotes A
T47994 10657-10668 NCBITaxon:31032 denotes . fumigatus
T85259 10777-10785 CHEBI:33893;CHEBI:33893 denotes reagents
T55352 10815-10820 UBERON:0001977 denotes serum
T62010 10825-10829 BV_4 denotes BALF
T90815 11061-11066 UBERON:0000178 denotes blood
T48524 11111-11122 UBERON:0001004 denotes respiratory
T65597 11432-11437 CHEBI:23888;CHEBI:23888 denotes drugs
T46137 11498-11507 CHEBI:35727;CHEBI:35727 denotes triazoles
T52391 11509-11521 CHEBI:6076;CHEBI:6076 denotes itraconazole
T91401 11523-11535 CHEBI:10023;CHEBI:10023 denotes voriconazole
T3792 17860-17868 SP_7 denotes COVID-19
T85248 11537-11549 CHEBI:64355;CHEBI:64355 denotes posaconazole
T90411 11565-11579 CHEBI:2682;CHEBI:2682 denotes Amphotericin B
T73200 11671-11679 CHEBI:35727;CHEBI:35727 denotes triazole
T5910 11680-11685 CHEBI:23888;CHEBI:23888 denotes drugs
T48332 11720-11724 CHEBI:23888;CHEBI:23888 denotes drug
T86042 11785-11791 CHEBI:68452;CHEBI:68452 denotes azoles
T32435 11802-11807 CHEBI:23888;CHEBI:23888 denotes drugs
T75578 11878-11886 SP_7 denotes COVID-19
T34882 11956-11975 CHEBI:36047;CHEBI:36047 denotes antibacterial drugs
T49366 12090-12096 UBERON:0002405 denotes immune
T64003 12144-12151 NCBITaxon:5478 denotes Candida
T61911 12152-12159 NCBITaxon:species denotes species
T23957 12257-12262 UBERON:0000178 denotes blood
T48865 12412-12418 CHEBI:37684;CHEBI:37684 denotes mannan
T92373 12434-12437 GO:0071735 denotes IgG
T47162 12445-12447 NCBITaxon:7719 denotes C.
T57710 12448-12456 NCBITaxon:8296 denotes albicans
T35396 12467-12475 GO:0042571 denotes antibody
T53099 12623-12628 UBERON:0000178 denotes blood
T24955 12659-12664 UBERON:0000178 denotes blood
T59727 12913-12920 NCBITaxon:5475 denotes Candida
T54891 13065-13072 NCBITaxon:5478 denotes Candida
T61456 13103-13108 UBERON:0000178 denotes blood
T65209 13273-13282 GO:0005618 denotes cell wall
T85105 13298-13305 NCBITaxon:5478 denotes Candida
T42218 13326-13331 NCBITaxon:4751 denotes fungi
T87069 13343-13355 NCBITaxon:106841 denotes Cryptococcus
T36492 13356-13363 NCBITaxon:species denotes species
T15328 13365-13376 NCBITaxon:229219 denotes Blastomyces
T4760 13377-13384 NCBITaxon:species denotes species
T58331 13390-13399 NCBITaxon:10090 denotes Mucorales
T42684 13468-13473 UBERON:0001977 denotes serum
T72467 13506-13513 NCBITaxon:5478 denotes Candida
T82705 13524-13529 NCBITaxon:4751 denotes fungi
T23301 13545-13551 CHEBI:37684;CHEBI:37684 denotes mannan
T42723 13567-13570 GO:0071735 denotes IgG
T74986 13684-13690 CHEBI:37684;CHEBI:37684 denotes mannan
T77993 13940-13947 NCBITaxon:5475 denotes Candida
T59886 14084-14091 NCBITaxon:5478 denotes Candida
T14852 14426-14431 UBERON:0000178 denotes blood
T20925 14848-14853 UBERON:0000178 denotes blood
T91350 14853-14860 UBERON:0006314 denotes -stream
T38107 14891-14898 NCBITaxon:5478 denotes Candida
T79192 14899-14907 SO:0001060 denotes isolates
T9230 14924-14935 NCBITaxon:5478 denotes C. glabrata
T87025 14939-14941 NCBITaxon:5478 denotes C.
T30437 14942-14954 NCBITaxon:7656 denotes parapsilosis
T22370 15287-15299 CHEBI:57248;CHEBI:57248 denotes echinocandin
T46371 15354-15365 CHEBI:46081;CHEBI:46081 denotes fluconazole
T37658 15367-15379 CHEBI:10023;CHEBI:10023 denotes voriconazole
T81153 15381-15393 CHEBI:6076;CHEBI:6076 denotes itraconazole
T23396 15400-15414 CHEBI:2682;CHEBI:2682 denotes Amphotericin B
T97471 15455-15461 CHEBI:68452;CHEBI:68452 denotes azoles
T23001 15541-15549 SP_7 denotes COVID-19
T32720 15823-15829 UBERON:0007311 denotes sputum
T9861 15831-15835 BV_4 denotes BALF
T91600 15976-15985 CHEBI:26130;CHEBI:26130 denotes pigmented
T10106 16001-16007 UBERON:0000479 denotes tissue
T83464 16036-16042 UBERON:0000479 denotes tissue
T35434 16065-16076 CHEBI:51686;CHEBI:51686 denotes hematoxylin
T10007 16174-16179 NCBITaxon:genus denotes genus
T7127 16184-16191 NCBITaxon:species denotes species
T90812 16395-16400 NCBITaxon:4751 denotes fungi
T23818 16437-16442 SO:0000704 denotes genes
T97689 16669-16674 NCBITaxon:4751 denotes fungi
T32801 16683-16688 UBERON:0001977 denotes serum
T94920 16709-16720 UBERON:0006314 denotes body fluids
T13019 16748-16754 UBERON:0000479 denotes tissue
T66115 17461-17473 CHEBI:64355;CHEBI:64355 denotes posaconazole
T48234 17494-17508 CHEBI:2682;CHEBI:2682 denotes Amphotericin B
T56630 17509-17514 CHEBI:18059;CHEBI:18059 denotes lipid
T55556 17515-17522 GO:0032991 denotes complex
T49844 17534-17548 CHEBI:2682;CHEBI:2682 denotes Amphotericin B
T95091 17553-17565 CHEBI:64355;CHEBI:64355 denotes posaconazole
T32997 17566-17570 UBERON:0000165 denotes oral
T69024 17642-17655 CHEBI:85979;CHEBI:85979 denotes isavuconazole
T31837 17783-17791 CHEBI:48121;CHEBI:48121 denotes polyenes
T93633 17796-17802 CHEBI:68452;CHEBI:68452 denotes azoles
T19394 17806-17814 CHEBI:48121;CHEBI:48121 denotes polyenes
T98903 17820-17833 CHEBI:57248;CHEBI:57248 denotes echinocandins
T4250 17883-17888 SP_6;NCBITaxon:9606 denotes human
T80532 17906-17911 NCBITaxon:10239 denotes virus
T69080 17943-17946 PR:000001004 denotes CD4
T57693 17949-17961 CL:0000084 denotes T-lymphocyte
T48016 18009-18015 UBERON:0002405 denotes immune
T2122 18205-18217 NCBITaxon:106841 denotes Cryptococcus
T52255 18218-18225 NCBITaxon:species denotes species
T50703 18236-18238 NCBITaxon:7719 denotes C.
T20343 18239-18249 NCBITaxon:5478 denotes neoformans
T17477 18254-18256 NCBITaxon:7719 denotes C.
T10330 18257-18263 NCBITaxon:5478 denotes gattii
T93842 18264-18271 NCBITaxon:species denotes species
T82098 18547-18566 UBERON:0001359 denotes cerebrospinal fluid
T15522 18568-18571 UBERON:0001359 denotes CSF
T58192 18668-18680 NCBITaxon:106841 denotes Cryptococcus
T54110 18698-18705 GO:0007114 denotes budding
T1942 18807-18811 CHEBI:2509;CHEBI:2509 denotes agar
T86453 18968-18972 GO:0040007 denotes grow
T63138 19031-19046 CHEBI:18154;CHEBI:18154 denotes polysaccharides
T61182 19099-19110 UBERON:0006314 denotes body fluids
T62464 19119-19124 UBERON:0001977 denotes serum
T61960 19152-19158 UBERON:0000479 denotes tissue
T30703 19190-19197 CHEBI:59132;CHEBI:59132 denotes antigen
T90969 19199-19203 PR:000003817 denotes CrAg
T24495 19444-19455 UBERON:0001004 denotes respiratory
T44771 19479-19492 UBERON:0001087 denotes pleural fluid
T43630 19497-19503 UBERON:0007311 denotes sputum
T49362 19700-19706 NCBITaxon:4751 denotes fungal
T52785 19887-19906 UBERON:0001359 denotes cerebrospinal fluid
T36771 19936-19943 CHEBI:59132;CHEBI:59132 denotes antigen
T28958 20021-20043 UBERON:0001017 denotes central nervous system
T89127 20224-20230 UBERON:0007023 denotes adults
T93441 20458-20472 CHEBI:2682;CHEBI:2682 denotes amphotericin B
T94698 20492-20503 CHEBI:5100;CHEBI:5100 denotes flucytosine
T49658 20517-20528 CHEBI:46081;CHEBI:46081 denotes fluconazole
T9605 20554-20565 CHEBI:46081;CHEBI:46081 denotes fluconazole
T18149 20568-20579 CHEBI:5100;CHEBI:5100 denotes flucytosine
T36092 20583-20597 CHEBI:2682;CHEBI:2682 denotes amphotericin B
T79474 20598-20610 CHEBI:23614;CHEBI:23614 denotes deoxycholate
T28968 20613-20624 CHEBI:46081;CHEBI:46081 denotes fluconazole
T44295 20655-20666 CHEBI:46081;CHEBI:46081 denotes fluconazole
T89336 20723-20734 CHEBI:46081;CHEBI:46081 denotes fluconazole
T75255 20784-20788 SP_10 denotes SARS
T39825 20854-20860 NCBITaxon:4751 denotes fungal
T46069 20898-20906 SP_7 denotes COVID-19
T64479 20954-20958 UBERON:0000104 denotes life
T56554 20991-20999 SP_7 denotes COVID-19
T92048 21016-21030 GO:0010467 denotes overexpression
T75201 21085-21091 UBERON:0002405;GO:0006955 denotes immune
T49672 21092-21100 GO:0006955 denotes response
T2312 21116-21119 PR:000001004 denotes CD4
T69012 21122-21123 CL:0000084 denotes T
T54698 21134-21140 CL:0000084 denotes T cell
T46770 21182-21188 NCBITaxon:4751 denotes fungal
T58249 21213-21221 SP_7 denotes COVID-19
T78951 21402-21408 NCBITaxon:4751 denotes fungal
T3426 21542-21548 CHEBI:37671;CHEBI:37671 denotes glucan
T20556 21550-21563 CHEBI:27680;CHEBI:27680 denotes galactomannan
T99766 21875-21883 SP_7 denotes COVID-19
T91168 22093-22101 SP_7 denotes COVID-19
T38663 22167-22173 NCBITaxon:4751 denotes fungal

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 2003-2011 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T2 2142-2147 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T3 5227-5231 Body_part denotes back http://purl.org/sig/ont/fma/fma25056
T4 6062-6068 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T5 6162-6168 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T6 7355-7360 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T7 7580-7588 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T8 7654-7659 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T9 8480-8484 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T10 8869-8892 Body_part denotes hematopoietic stem cell http://purl.org/sig/ont/fma/fma86475
T11 8888-8892 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T12 8922-8933 Body_part denotes solid organ http://purl.org/sig/ont/fma/fma55670
T13 9196-9200 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T14 9384-9388 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T15 9398-9404 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T16 9633-9639 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T17 10242-10245 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T18 10457-10466 Body_part denotes ribosomal http://purl.org/sig/ont/fma/fma66867
T19 10467-10470 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T20 10537-10544 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T21 10815-10820 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T22 11061-11066 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T23 12257-12262 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T24 12434-12437 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T25 12467-12475 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T26 12623-12628 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T27 12649-12653 Body_part denotes hand http://purl.org/sig/ont/fma/fma9712
T28 12659-12664 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T29 12841-12845 Body_part denotes hand http://purl.org/sig/ont/fma/fma9712
T30 13103-13108 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T31 13273-13277 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T32 13468-13473 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T33 13567-13570 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T34 14092-14095 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T35 14426-14431 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T36 14848-14853 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T37 15823-15829 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T38 15841-15845 Body_part denotes skin http://purl.org/sig/ont/fma/fma7163
T39 16001-16007 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T40 16036-16042 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T41 16404-16407 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T42 16675-16678 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T43 16683-16688 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T44 16709-16720 Body_part denotes body fluids http://purl.org/sig/ont/fma/fma280556
T45 16709-16713 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T46 16748-16754 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T47 17509-17514 Body_part denotes lipid http://purl.org/sig/ont/fma/fma67264
T48 17913-17916 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T49 17943-17961 Body_part denotes CD4 + T-lymphocyte http://purl.org/sig/ont/fma/fma70572
T50 17949-17961 Body_part denotes T-lymphocyte http://purl.org/sig/ont/fma/fma62870
T51 17974-17979 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T52 18547-18566 Body_part denotes cerebrospinal fluid http://purl.org/sig/ont/fma/fma20935
T53 18568-18571 Body_part denotes CSF http://purl.org/sig/ont/fma/fma20935
T54 19031-19046 Body_part denotes polysaccharides http://purl.org/sig/ont/fma/fma82746
T55 19099-19110 Body_part denotes body fluids http://purl.org/sig/ont/fma/fma280556
T56 19099-19103 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T57 19119-19124 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T58 19126-19129 Body_part denotes CSF http://purl.org/sig/ont/fma/fma20935
T59 19152-19158 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T60 19479-19492 Body_part denotes pleural fluid http://purl.org/sig/ont/fma/fma12273
T61 19497-19503 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T62 19712-19715 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T63 19887-19906 Body_part denotes cerebrospinal fluid http://purl.org/sig/ont/fma/fma20935
T64 19908-19911 Body_part denotes CSF http://purl.org/sig/ont/fma/fma20935
T65 20021-20043 Body_part denotes central nervous system http://purl.org/sig/ont/fma/fma55675
T66 20211-20214 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T67 20322-20325 Body_part denotes hiv http://purl.org/sig/ont/fma/fma278683
T68 21047-21056 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T69 21071-21075 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T70 21136-21140 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 6062-6068 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T2 6162-6168 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T3 7355-7360 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T4 7654-7659 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T5 8480-8484 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T6 8928-8933 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T7 9196-9200 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T8 9384-9388 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T9 9398-9404 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T10 9633-9639 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T11 10158-10180 Body_part denotes morphological features http://purl.obolibrary.org/obo/UBERON_0034768
T12 10815-10820 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T13 11061-11066 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T14 12257-12262 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T15 12462-12466 Body_part denotes tube http://purl.obolibrary.org/obo/UBERON_0000025
T16 12623-12628 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T17 12649-12653 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T18 12659-12664 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T19 12841-12845 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T20 13103-13108 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T21 13468-13473 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T22 14426-14431 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T23 14848-14853 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T24 15823-15829 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T25 15841-15845 Body_part denotes skin http://purl.obolibrary.org/obo/UBERON_0000014
T26 16001-16007 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T27 16036-16042 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T28 16683-16688 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T29 16748-16754 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T30 18547-18566 Body_part denotes cerebrospinal fluid http://purl.obolibrary.org/obo/UBERON_0001359
T31 19119-19124 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T32 19152-19158 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T33 19479-19492 Body_part denotes pleural fluid http://purl.obolibrary.org/obo/UBERON_0001087
T34 19497-19503 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T35 19887-19906 Body_part denotes cerebrospinal fluid http://purl.obolibrary.org/obo/UBERON_0001359
T36 20021-20043 Body_part denotes central nervous system http://purl.obolibrary.org/obo/UBERON_0001017
T37 20029-20043 Body_part denotes nervous system http://purl.obolibrary.org/obo/UBERON_0001016

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
2 0-20 Disease denotes Fungal Co-infections MESH:D060085
3 44-52 Disease denotes COVID-19 MESH:C000657245
28 169-216 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
29 218-228 Species denotes SARS-CoV-2 Tax:2697049
30 506-514 Species denotes patients Tax:9606
31 671-679 Species denotes patients Tax:9606
32 1119-1127 Species denotes patients Tax:9606
33 1323-1331 Species denotes patients Tax:9606
34 624-635 Species denotes Aspergillus Tax:746128
35 640-647 Species denotes Candida Tax:5478
36 810-826 Chemical denotes (1,3)-β-d-glucan MESH:C480180
37 828-841 Chemical denotes galactomannan MESH:C012990
38 122-146 Disease denotes Coronavirus disease 2019 MESH:C000657245
39 148-156 Disease denotes COVID-19 MESH:C000657245
40 304-308 Disease denotes SARS MESH:D045169
41 381-394 Disease denotes co-infections MESH:D060085
42 418-426 Disease denotes COVID-19 MESH:C000657245
43 497-505 Disease denotes COVID-19 MESH:C000657245
44 648-658 Disease denotes infections MESH:D007239
45 662-670 Disease denotes COVID-19 MESH:C000657245
46 963-979 Disease denotes invasive mycosis MESH:D015821
47 1110-1118 Disease denotes COVID-19 MESH:C000657245
48 1233-1246 Disease denotes aspergillosis MESH:D001228
49 1248-1259 Disease denotes candidiasis MESH:D002177
50 1278-1292 Disease denotes cryptococcosis MESH:D003453
51 1314-1322 Disease denotes COVID-19 MESH:C000657245
54 1359-1367 Disease denotes COVID-19 MESH:C000657245
55 1391-1411 Disease denotes Fungal Co-infections MESH:D060085
81 2122-2125 Gene denotes CD4 Gene:920
82 2134-2137 Gene denotes CD8 Gene:925
83 1419-1424 Species denotes human Tax:9606
84 1428-1433 Species denotes human Tax:9606
85 1502-1549 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
86 1551-1561 Species denotes SARS-CoV-2 Tax:2697049
87 1791-1799 Species denotes SARS-CoV Tax:694009
88 1804-1859 Species denotes Middle East Respiratory Syndrome Coronavirus (MERS-CoV) Tax:1335626
89 1861-1871 Species denotes SARS-CoV-2 Tax:2697049
90 2064-2072 Species denotes patients Tax:9606
91 2168-2176 Species denotes patients Tax:9606
92 2193-2201 Species denotes patients Tax:9606
93 2460-2468 Species denotes patients Tax:9606
94 1455-1479 Disease denotes coronavirus disease 2019 MESH:C000657245
95 1481-1489 Disease denotes COVID-19 MESH:C000657245
96 1647-1655 Disease denotes COVID-19 MESH:C000657245
97 1769-1775 Disease denotes deaths MESH:D003643
98 1897-1918 Disease denotes respiratory infection MESH:D012141
99 1933-1969 Disease denotes Acute Respiratory Distress Syndromes MESH:D012128
100 1971-1975 Disease denotes ARDS MESH:D012128
101 2055-2063 Disease denotes COVID-19 MESH:C000657245
102 2153-2167 Disease denotes Critically ill MESH:D016638
103 2394-2407 Disease denotes co-infections MESH:D060085
104 2451-2459 Disease denotes COVID-19 MESH:C000657245
105 2496-2506 Disease denotes infections MESH:D007239
108 2611-2631 Disease denotes Fungal Co-infections MESH:D060085
109 2635-2643 Disease denotes COVID-19 MESH:C000657245
157 2714-2722 Species denotes patients Tax:9606
158 2915-2925 Species denotes SARS-CoV-2 Tax:2697049
159 2931-2940 Species denotes 2019-nCoV Tax:2697049
160 2946-2968 Species denotes 2019 novel coronavirus Tax:2697049
161 3456-3464 Species denotes patients Tax:9606
162 3638-3646 Species denotes patients Tax:9606
163 3735-3753 Species denotes Aspergillus flavus Tax:5059
164 3767-3783 Species denotes Candida glabrata Tax:5478
165 3803-3814 Species denotes C. albicans Tax:5476
166 3857-3865 Species denotes patients Tax:9606
167 3911-3919 Species denotes patients Tax:9606
168 3931-3940 Species denotes A. flavus Tax:5059
169 3942-3954 Species denotes A. fumigatus Tax:746128
170 3959-3970 Species denotes C. albicans Tax:5476
171 4071-4079 Species denotes patients Tax:9606
172 4207-4215 Species denotes patients Tax:9606
173 4290-4298 Species denotes patients Tax:9606
174 4324-4332 Species denotes patients Tax:9606
175 4438-4445 Species denotes patient Tax:9606
176 4636-4644 Species denotes patients Tax:9606
177 4711-4719 Species denotes patients Tax:9606
178 4751-4759 Species denotes patients Tax:9606
179 4791-4803 Species denotes A. fumigatus Tax:746128
180 4868-4876 Species denotes patients Tax:9606
181 4923-4932 Species denotes A. flavus Tax:5059
182 2681-2701 Disease denotes fungal co-infections MESH:D060085
183 2705-2713 Disease denotes COVID-19 MESH:C000657245
184 2830-2839 Disease denotes infection MESH:D007239
185 2885-2894 Disease denotes infection MESH:D007239
186 2901-2909 Disease denotes COVID-19 MESH:C000657245
187 3338-3351 Disease denotes co-infections MESH:D060085
188 3447-3455 Disease denotes COVID-19 MESH:C000657245
189 3544-3557 Disease denotes co-infections MESH:D060085
190 3629-3637 Disease denotes COVID-19 MESH:C000657245
191 3702-3711 Disease denotes infection MESH:D007239
192 3870-3889 Disease denotes fungal co-infection MESH:D060085
193 3896-3910 Disease denotes critically ill MESH:D016638
194 4030-4050 Disease denotes secondary infections MESH:D060085
195 4062-4070 Disease denotes COVID-19 MESH:C000657245
196 4128-4144 Disease denotes fungal infection MESH:D009181
197 4375-4394 Disease denotes fungal co-infection MESH:D060085
198 4518-4526 Disease denotes COVID-19 MESH:C000657245
199 4538-4570 Disease denotes invasive pulmonary aspergillosis MESH:D055744
200 4621-4635 Disease denotes critically ill MESH:D016638
201 4669-4673 Disease denotes ARDS MESH:D012128
202 4859-4867 Disease denotes COVID-19 MESH:C000657245
203 4909-4917 Disease denotes infected MESH:D007239
208 5012-5020 Species denotes Patients Tax:9606
209 4980-4999 Disease denotes Fungal Co-infection MESH:D060085
210 5003-5011 Disease denotes COVID-19 MESH:C000657245
211 5046-5050 Disease denotes SARS MESH:D045169
242 5089-5097 Species denotes SARS-CoV Tax:694009
243 5102-5112 Species denotes SARS-CoV-2 Tax:2697049
244 5300-5308 Species denotes patients Tax:9606
245 5457-5465 Species denotes patients Tax:9606
246 5725-5733 Species denotes patients Tax:9606
247 5797-5805 Species denotes patients Tax:9606
248 5935-5943 Species denotes patients Tax:9606
249 6037-6045 Species denotes patients Tax:9606
250 5235-5239 Disease denotes SARS MESH:D045169
251 5275-5291 Disease denotes fungal infection MESH:D009181
252 5295-5299 Disease denotes SARS MESH:D045169
253 5410-5419 Disease denotes infection MESH:D007239
254 5442-5447 Disease denotes death MESH:D003643
255 5452-5456 Disease denotes SARS MESH:D045169
256 5508-5513 Disease denotes death MESH:D003643
257 5588-5597 Disease denotes pneumonia MESH:D011014
258 5611-5615 Disease denotes ARDS MESH:D012128
259 5631-5647 Disease denotes fungal infection MESH:D009181
260 5842-5851 Disease denotes mortality MESH:D003643
261 5903-5922 Disease denotes fungal co-infection MESH:D060085
262 5926-5934 Disease denotes COVID-19 MESH:C000657245
263 6028-6036 Disease denotes COVID-19 MESH:C000657245
264 6255-6275 Disease denotes respiratory symptoms MESH:D012818
265 6279-6287 Disease denotes COVID-19 MESH:C000657245
266 6320-6332 Disease denotes co-infection MESH:D060085
267 6450-6466 Disease denotes fungal infection MESH:D009181
268 6526-6530 Disease denotes SARS MESH:D045169
269 6556-6578 Disease denotes invasive aspergillosis MESH:D055744
270 6677-6685 Disease denotes COVID-19 MESH:C000657245
271 6701-6718 Disease denotes fungal infections MESH:D009181
274 6760-6768 Disease denotes COVID-19 MESH:C000657245
275 6785-6805 Disease denotes Fungal Co-infections MESH:D060085
294 7009-7017 Species denotes patients Tax:9606
295 7165-7173 Species denotes patients Tax:9606
296 7410-7418 Species denotes patients Tax:9606
297 7702-7710 Species denotes patients Tax:9606
298 8386-8394 Species denotes patients Tax:9606
299 8399-8410 Species denotes Aspergillus Tax:746128
300 8415-8422 Species denotes Candida Tax:5478
301 8542-8554 Species denotes Cryptococcus Tax:5207
302 6821-6829 Disease denotes COVID-19 MESH:C000657245
303 6882-6895 Disease denotes co-infections MESH:D060085
304 7000-7008 Disease denotes COVID-19 MESH:C000657245
305 7109-7117 Disease denotes COVID-19 MESH:C000657245
306 7182-7192 Disease denotes infections MESH:D007239
307 7314-7324 Disease denotes infections MESH:D007239
308 7936-7946 Disease denotes infections MESH:D007239
309 8353-8366 Disease denotes co-infections MESH:D060085
310 8377-8385 Disease denotes COVID-19 MESH:C000657245
311 8480-8495 Disease denotes lung infections MESH:D012141
313 8557-8579 Disease denotes Invasive Aspergillosis MESH:D055744
344 8675-8683 Species denotes patients Tax:9606
345 8764-8772 Species denotes patients Tax:9606
346 9179-9187 Species denotes patients Tax:9606
347 9236-9244 Species denotes patients Tax:9606
348 10656-10668 Species denotes A. fumigatus Tax:746128
349 10970-10978 Species denotes patients Tax:9606
350 8585-8596 Species denotes Aspergillus Tax:746128
351 9516-9527 Species denotes Aspergillus Tax:746128
352 9691-9702 Species denotes Aspergillus Tax:746128
353 10057-10068 Species denotes Aspergillus Tax:746128
354 10184-10195 Species denotes Aspergillus Tax:746128
355 10522-10533 Species denotes Aspergillus Tax:746128
356 10604-10615 Species denotes Aspergillus Tax:746128
357 9555-9566 Chemical denotes methenamine MESH:D008709
358 9567-9573 Chemical denotes silver MESH:D012834
359 9581-9584 Chemical denotes GMS
360 9590-9603 Chemical denotes periodic acid MESH:D010504
361 10830-10832 Chemical denotes GM MESH:C012990
362 8653-8662 Disease denotes infection MESH:D007239
363 8666-8674 Disease denotes COVID-19 MESH:C000657245
364 8799-8810 Disease denotes neutropenia MESH:D009503
365 8812-8849 Disease denotes chronic obstructive pulmonary disease MESH:D029424
366 8851-8855 Disease denotes COPD MESH:D029424
367 8967-8985 Disease denotes immunodeficiencies MESH:D007153
368 8987-9009 Disease denotes hemopoietic malignancy MESH:D009369
369 9016-9031 Disease denotes cystic fibrosis MESH:D003550
370 9250-9271 Disease denotes coagulation disorders MESH:D001778
371 9282-9301 Disease denotes respiratory failure MESH:D012131
372 9419-9428 Disease denotes infection MESH:D007239
373 10958-10969 Disease denotes neutropenic MESH:D009503
388 11651-11659 Species denotes patients Tax:9606
389 11498-11507 Chemical denotes triazoles MESH:D014230
390 11509-11521 Chemical denotes itraconazole MESH:D017964
391 11523-11535 Chemical denotes voriconazole MESH:D065819
392 11537-11549 Chemical denotes posaconazole MESH:C101425
393 11551-11562 Chemical denotes esaconazole
394 11565-11579 Chemical denotes Amphotericin B MESH:D000666
395 11602-11615 Chemical denotes echinococcins
396 11617-11627 Chemical denotes micafungin MESH:D000077551
397 11631-11643 Chemical denotes carpofenjing
398 11671-11679 Chemical denotes triazole MESH:D014230
399 11785-11791 Chemical denotes azoles MESH:D001393
400 11220-11239 Disease denotes Infectious Diseases MESH:D003141
401 11345-11366 Disease denotes aspergillus infection MESH:D001228
403 11837-11857 Disease denotes Invasive Candidiasis MESH:D058365
425 11887-11895 Species denotes patients Tax:9606
426 12032-12040 Species denotes patients Tax:9606
427 12445-12456 Species denotes C. albicans Tax:5476
428 14396-14402 Species denotes yeasts Tax:4932
429 14924-14935 Species denotes C. glabrata Tax:5478
430 14939-14954 Species denotes C. parapsilosis Tax:5480
431 12144-12151 Species denotes Candida Tax:5478
432 12913-12920 Species denotes Candida Tax:5478
433 13298-13305 Species denotes Candida Tax:5478
434 13343-13355 Species denotes Cryptococcus Tax:5207
435 13506-13513 Species denotes Candida Tax:5478
436 13940-13947 Species denotes Candida Tax:5478
437 14084-14091 Species denotes Candida Tax:5478
438 14891-14898 Species denotes Candida Tax:5478
439 13258-13261 Chemical denotes BDG
440 11878-11886 Disease denotes COVID-19 MESH:C000657245
441 12068-12079 Disease denotes neutropenia MESH:D009503
442 12129-12138 Disease denotes infection MESH:D007239
443 13019-13030 Disease denotes candidiasis MESH:D002177
444 13045-13082 Disease denotes candidiasis or deep Candida infection MESH:C536777
445 14139-14149 Disease denotes candidemia MESH:D058387
460 15216-15224 Species denotes patients Tax:9606
461 15287-15299 Chemical denotes echinocandin MESH:D054714
462 15301-15312 Chemical denotes caspofungin MESH:D000077336
463 15314-15324 Chemical denotes micafungin MESH:D000077551
464 15330-15343 Chemical denotes anidulafungin MESH:D000077612
465 15346-15352 Chemical denotes azoles MESH:D001393
466 15354-15365 Chemical denotes fluconazole MESH:D015725
467 15367-15379 Chemical denotes voriconazole MESH:D065819
468 15381-15393 Chemical denotes itraconazole MESH:D017964
469 15400-15414 Chemical denotes Amphotericin B MESH:D000666
470 15455-15461 Chemical denotes azoles MESH:D001393
471 15039-15058 Disease denotes Infectious Diseases MESH:D003141
472 15129-15150 Disease denotes candidiasis infection MESH:D002177
473 15508-15516 Disease denotes toxicity MESH:D064420
475 15519-15540 Disease denotes Invasive Mucormycosis MESH:D009091
488 15550-15558 Species denotes patients Tax:9606
489 16065-16082 Chemical denotes hematoxylin–eosin
490 16084-16086 Chemical denotes HE
491 16089-16092 Chemical denotes PAS
492 16097-16100 Chemical denotes GMS
493 16730-16738 Chemical denotes paraffin MESH:D010232
494 15541-15549 Disease denotes COVID-19 MESH:C000657245
495 15564-15570 Disease denotes trauma MESH:D014947
496 15572-15589 Disease denotes diabetes mellitus MESH:D003920
497 15613-15624 Disease denotes neutropenia MESH:D009503
498 15841-15853 Disease denotes skin lesions MESH:D012871
499 15972-15992 Disease denotes non-pigmented hyphae MESH:D010859
512 17368-17376 Species denotes patients Tax:9606
513 17461-17473 Chemical denotes posaconazole MESH:C101425
514 17494-17508 Chemical denotes Amphotericin B MESH:D000666
515 17509-17514 Chemical denotes lipid MESH:D008055
516 17534-17548 Chemical denotes Amphotericin B MESH:D000666
517 17553-17565 Chemical denotes posaconazole MESH:C101425
518 17642-17655 Chemical denotes isavuconazole MESH:C508735
519 17783-17802 Chemical denotes polyenes and azoles
520 17806-17814 Chemical denotes polyenes MESH:D011090
521 17820-17833 Chemical denotes echinocandins MESH:D054714
522 17356-17367 Disease denotes neutropenic MESH:D009503
523 17389-17414 Disease denotes graft-versus-host disease MESH:D006086
525 17836-17859 Disease denotes Invasive Cryptococcosis MESH:D003453
553 17943-17946 Gene denotes CD4 Gene:920
554 17980-17982 Gene denotes μL Gene:4591
555 17869-17877 Species denotes patients Tax:9606
556 18236-18249 Species denotes C. neoformans Tax:5207
557 18254-18263 Species denotes C. gattii Tax:552467
558 18719-18725 Species denotes yeasts Tax:4932
559 18900-18908 Species denotes patients Tax:9606
560 19533-19548 Species denotes Cryptococcus is Tax:1198465
561 19968-19976 Species denotes patients Tax:9606
562 18205-18217 Species denotes Cryptococcus Tax:5207
563 18668-18680 Species denotes Cryptococcus Tax:5207
564 18974-18986 Species denotes Cryptococcus Tax:5207
565 19050-19062 Species denotes Cryptococcus Tax:5207
566 19983-19995 Species denotes Cryptococcus Tax:5207
567 18591-18600 Chemical denotes India ink MESH:C028433
568 18788-18811 Chemical denotes Sabouraud dextrose agar
569 17860-17868 Disease denotes COVID-19 MESH:C000657245
570 17883-17927 Disease denotes human immunodeficiency virus (HIV) infection MESH:D015658
571 18044-18058 Disease denotes cryptococcosis MESH:D003453
572 18090-18109 Disease denotes meningoencephalitis MESH:D008590
573 18168-18182 Disease denotes cryptococcosis MESH:D003453
574 18290-18304 Disease denotes cryptococcosis MESH:D003453
575 18412-18421 Disease denotes infection MESH:D007239
576 18517-18531 Disease denotes cryptococcosis MESH:D003453
577 19648-19662 Disease denotes cryptococcosis MESH:D003453
578 19841-19855 Disease denotes cryptococcosis MESH:D003453
579 20052-20075 Disease denotes cryptococcal meningitis MESH:D016919
595 20249-20257 Species denotes children Tax:9606
596 20322-20325 Species denotes hiv Tax:12721
597 20458-20485 Chemical denotes amphotericin B deoxycholate MESH:C059765
598 20492-20503 Chemical denotes flucytosine MESH:D005437
599 20517-20528 Chemical denotes fluconazole MESH:D015725
600 20554-20565 Chemical denotes fluconazole MESH:D015725
601 20568-20579 Chemical denotes flucytosine MESH:D005437
602 20583-20597 Chemical denotes amphotericin B MESH:D000666
603 20598-20610 Chemical denotes deoxycholate MESH:D003840
604 20613-20624 Chemical denotes fluconazole MESH:D015725
605 20655-20666 Chemical denotes fluconazole MESH:D015725
606 20723-20734 Chemical denotes fluconazole MESH:D015725
607 20187-20207 Disease denotes cryptococcal disease MESH:D016919
608 20211-20223 Disease denotes HIV-infected MESH:D015658
609 20341-20361 Disease denotes cryptococcal-disease MESH:D016919
611 22158-22186 Disease denotes invasive fungal co-infection MESH:D060085
638 21116-21119 Gene denotes CD4 Gene:920
639 21128-21131 Gene denotes CD8 Gene:925
640 21000-21008 Species denotes patients Tax:9606
641 21222-21230 Species denotes patients Tax:9606
642 21884-21892 Species denotes patients Tax:9606
643 22102-22110 Species denotes patients Tax:9606
644 21532-21548 Chemical denotes (1,3)-β-d-glucan MESH:C480180
645 21550-21563 Chemical denotes galactomannan MESH:C012990
646 20784-20788 Disease denotes SARS MESH:D045169
647 20861-20874 Disease denotes co-infections MESH:D060085
648 20898-20906 Disease denotes COVID-19 MESH:C000657245
649 20971-20989 Disease denotes infectious disease MESH:D003141
650 20991-20999 Disease denotes COVID-19 MESH:C000657245
651 21189-21201 Disease denotes co-infection MESH:D060085
652 21213-21221 Disease denotes COVID-19 MESH:C000657245
653 21291-21302 Disease denotes neutropenia MESH:D009503
654 21345-21363 Disease denotes immunodeficiencies MESH:D007153
655 21369-21374 Disease denotes tumor MESH:D009369
656 21402-21421 Disease denotes fungal co-infection MESH:D060085
657 21644-21660 Disease denotes invasive mycosis MESH:D015821
658 21728-21744 Disease denotes invasive mycosis MESH:D015821
659 21875-21883 Disease denotes COVID-19 MESH:C000657245
660 22013-22026 Disease denotes aspergillosis MESH:D001228
661 22028-22039 Disease denotes candidiasis MESH:D002177
662 22058-22072 Disease denotes cryptococcosis MESH:D003453
663 22093-22101 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 10-20 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T2 44-52 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 122-146 Disease denotes Coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T4 148-156 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T5 169-216 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T6 169-202 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T7 218-226 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T8 304-308 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T9 313-322 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T10 384-394 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T11 418-426 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T12 497-505 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T13 615-622 Disease denotes mycoses http://purl.obolibrary.org/obo/MONDO_0002041
T14 640-661 Disease denotes Candida infections in http://purl.obolibrary.org/obo/MONDO_0002026
T15 662-670 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T16 972-979 Disease denotes mycosis http://purl.obolibrary.org/obo/MONDO_0002041
T17 1110-1118 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T18 1233-1246 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T19 1248-1259 Disease denotes candidiasis http://purl.obolibrary.org/obo/MONDO_0002026
T20 1261-1273 Disease denotes mucormycosis http://purl.obolibrary.org/obo/MONDO_0019136
T21 1278-1292 Disease denotes cryptococcosis http://purl.obolibrary.org/obo/MONDO_0005724
T22 1314-1322 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T23 1359-1367 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T24 1401-1411 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T25 1455-1479 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T26 1481-1489 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T27 1502-1549 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T28 1502-1535 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T29 1551-1559 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T30 1647-1655 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T31 1791-1799 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T32 1861-1869 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T33 1897-1918 Disease denotes respiratory infection http://purl.obolibrary.org/obo/MONDO_0024355
T34 1909-1918 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T35 1933-1969 Disease denotes Acute Respiratory Distress Syndromes http://purl.obolibrary.org/obo/MONDO_0006502
T36 1939-1969 Disease denotes Respiratory Distress Syndromes http://purl.obolibrary.org/obo/MONDO_0009971
T37 1971-1975 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T38 2055-2063 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T39 2397-2407 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T40 2451-2459 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T41 2489-2506 Disease denotes fungal infections http://purl.obolibrary.org/obo/MONDO_0002041
T42 2621-2634 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T43 2635-2643 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T44 2691-2704 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T45 2705-2713 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T46 2823-2839 Disease denotes fungal infection http://purl.obolibrary.org/obo/MONDO_0002041
T47 2830-2839 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T48 2885-2894 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T49 2901-2909 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T50 2915-2923 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T51 3341-3351 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T52 3447-3455 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T53 3547-3566 Disease denotes infections of fungi http://purl.obolibrary.org/obo/MONDO_0002041
T54 3629-3637 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T55 3695-3711 Disease denotes fungal infection http://purl.obolibrary.org/obo/MONDO_0002041
T56 3702-3711 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T57 3767-3783 Disease denotes Candida glabrata http://purl.obolibrary.org/obo/MONDO_0022636
T58 3880-3889 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T59 4040-4050 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T60 4062-4070 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T61 4128-4144 Disease denotes fungal infection http://purl.obolibrary.org/obo/MONDO_0002041
T62 4135-4144 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T63 4385-4394 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T64 4518-4526 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T65 4557-4570 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T66 4669-4673 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T67 4859-4867 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T68 4990-4999 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T69 5003-5011 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T70 5046-5050 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T71 5055-5064 Disease denotes Influenza http://purl.obolibrary.org/obo/MONDO_0005812
T72 5089-5097 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T73 5102-5110 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T74 5235-5239 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T75 5275-5291 Disease denotes fungal infection http://purl.obolibrary.org/obo/MONDO_0002041
T76 5282-5291 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T77 5295-5299 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T78 5403-5419 Disease denotes fungal infection http://purl.obolibrary.org/obo/MONDO_0002041
T79 5410-5419 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T80 5452-5456 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T81 5578-5587 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T82 5588-5597 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T83 5611-5615 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T84 5631-5647 Disease denotes fungal infection http://purl.obolibrary.org/obo/MONDO_0002041
T85 5638-5647 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T86 5748-5757 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T87 5913-5922 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T88 5926-5934 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T89 6028-6036 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T90 6279-6287 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T91 6323-6332 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T92 6450-6466 Disease denotes fungal infection http://purl.obolibrary.org/obo/MONDO_0002041
T93 6457-6466 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T94 6526-6530 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T95 6556-6578 Disease denotes invasive aspergillosis http://purl.obolibrary.org/obo/MONDO_0000240
T96 6565-6578 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T97 6600-6609 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T98 6677-6685 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T99 6701-6718 Disease denotes fungal infections http://purl.obolibrary.org/obo/MONDO_0002041
T100 6760-6768 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T101 6795-6805 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T102 6821-6829 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T103 6885-6895 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T104 7000-7008 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T105 7109-7117 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T106 7175-7192 Disease denotes fungal infections http://purl.obolibrary.org/obo/MONDO_0002041
T107 7307-7324 Disease denotes fungal infections http://purl.obolibrary.org/obo/MONDO_0002041
T108 7777-7779 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T109 7936-7946 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T110 8356-8369 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T111 8377-8385 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T112 8485-8495 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T113 8557-8579 Disease denotes Invasive Aspergillosis http://purl.obolibrary.org/obo/MONDO_0000240
T114 8566-8579 Disease denotes Aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T115 8581-8583 Disease denotes IA http://purl.obolibrary.org/obo/MONDO_0000240
T116 8653-8662 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T117 8666-8674 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T118 8799-8810 Disease denotes neutropenia http://purl.obolibrary.org/obo/MONDO_0001475
T119 8812-8849 Disease denotes chronic obstructive pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005002
T120 8832-8849 Disease denotes pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005275
T121 8851-8855 Disease denotes COPD http://purl.obolibrary.org/obo/MONDO_0005002
T122 8967-8985 Disease denotes immunodeficiencies http://purl.obolibrary.org/obo/MONDO_0021094
T123 9016-9031 Disease denotes cystic fibrosis http://purl.obolibrary.org/obo/MONDO_0009061
T124 9033-9035 Disease denotes CF http://purl.obolibrary.org/obo/MONDO_0009061
T125 9065-9067 Disease denotes IA http://purl.obolibrary.org/obo/MONDO_0000240
T126 9250-9274 Disease denotes coagulation disorders or http://purl.obolibrary.org/obo/MONDO_0001531
T127 9282-9301 Disease denotes respiratory failure http://purl.obolibrary.org/obo/MONDO_0021113
T128 9412-9428 Disease denotes fungal infection http://purl.obolibrary.org/obo/MONDO_0002041
T129 9419-9428 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T130 9612-9615 Disease denotes PAS http://purl.obolibrary.org/obo/MONDO_0004277
T131 10420-10422 Disease denotes IA http://purl.obolibrary.org/obo/MONDO_0000240
T132 11004-11010 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T133 11220-11230 Disease denotes Infectious http://purl.obolibrary.org/obo/MONDO_0005550
T134 11357-11366 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T135 11487-11489 Disease denotes IA http://purl.obolibrary.org/obo/MONDO_0000240
T136 11695-11697 Disease denotes IA http://purl.obolibrary.org/obo/MONDO_0000240
T137 11837-11857 Disease denotes Invasive Candidiasis http://purl.obolibrary.org/obo/MONDO_0042233|http://purl.obolibrary.org/obo/MONDO_0044067
T139 11846-11857 Disease denotes Candidiasis http://purl.obolibrary.org/obo/MONDO_0002026
T140 11859-11861 Disease denotes IC http://purl.obolibrary.org/obo/MONDO_0042233
T141 11878-11886 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T142 12068-12079 Disease denotes neutropenia http://purl.obolibrary.org/obo/MONDO_0001475
T143 12129-12138 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T144 12206-12208 Disease denotes IC http://purl.obolibrary.org/obo/MONDO_0042233
T145 12296-12303 Disease denotes sterile http://purl.obolibrary.org/obo/MONDO_0005047
T146 12366-12368 Disease denotes IC http://purl.obolibrary.org/obo/MONDO_0042233
T147 13019-13030 Disease denotes candidiasis http://purl.obolibrary.org/obo/MONDO_0002026
T148 13045-13056 Disease denotes candidiasis http://purl.obolibrary.org/obo/MONDO_0002026
T149 13065-13082 Disease denotes Candida infection http://purl.obolibrary.org/obo/MONDO_0002026
T150 13073-13082 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T151 14139-14149 Disease denotes candidemia http://purl.obolibrary.org/obo/MONDO_0044070
T152 14659-14661 Disease denotes IC http://purl.obolibrary.org/obo/MONDO_0042233
T153 15039-15049 Disease denotes Infectious http://purl.obolibrary.org/obo/MONDO_0005550
T154 15129-15140 Disease denotes candidiasis http://purl.obolibrary.org/obo/MONDO_0002026
T155 15141-15150 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T156 15261-15263 Disease denotes IC http://purl.obolibrary.org/obo/MONDO_0042233
T157 15528-15540 Disease denotes Mucormycosis http://purl.obolibrary.org/obo/MONDO_0019136
T158 15541-15549 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T159 15564-15570 Disease denotes trauma http://purl.obolibrary.org/obo/MONDO_0021178
T160 15572-15589 Disease denotes diabetes mellitus http://purl.obolibrary.org/obo/MONDO_0005015
T161 15613-15624 Disease denotes neutropenia http://purl.obolibrary.org/obo/MONDO_0001475
T162 15668-15680 Disease denotes mucormycosis http://purl.obolibrary.org/obo/MONDO_0019136
T163 15687-15699 Disease denotes Mucormycosis http://purl.obolibrary.org/obo/MONDO_0019136
T164 16089-16092 Disease denotes PAS http://purl.obolibrary.org/obo/MONDO_0004277
T165 16952-16964 Disease denotes mucormycosis http://purl.obolibrary.org/obo/MONDO_0019136
T166 17030-17037 Disease denotes Mycoses http://purl.obolibrary.org/obo/MONDO_0002041
T167 17135-17147 Disease denotes mucormycosis http://purl.obolibrary.org/obo/MONDO_0019136
T168 17275-17287 Disease denotes mucormycosis http://purl.obolibrary.org/obo/MONDO_0019136
T169 17389-17414 Disease denotes graft-versus-host disease http://purl.obolibrary.org/obo/MONDO_0013730
T170 17845-17859 Disease denotes Cryptococcosis http://purl.obolibrary.org/obo/MONDO_0005724
T171 17860-17868 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T172 17889-17905 Disease denotes immunodeficiency http://purl.obolibrary.org/obo/MONDO_0021094
T173 17912-17927 Disease denotes (HIV) infection http://purl.obolibrary.org/obo/MONDO_0005109
T174 17918-17927 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T175 18044-18058 Disease denotes cryptococcosis http://purl.obolibrary.org/obo/MONDO_0005724
T176 18090-18109 Disease denotes meningoencephalitis http://purl.obolibrary.org/obo/MONDO_0005845
T177 18168-18182 Disease denotes cryptococcosis http://purl.obolibrary.org/obo/MONDO_0005724
T178 18290-18304 Disease denotes cryptococcosis http://purl.obolibrary.org/obo/MONDO_0005724
T179 18412-18421 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T180 18517-18531 Disease denotes cryptococcosis http://purl.obolibrary.org/obo/MONDO_0005724
T181 19648-19662 Disease denotes cryptococcosis http://purl.obolibrary.org/obo/MONDO_0005724
T182 19841-19855 Disease denotes cryptococcosis http://purl.obolibrary.org/obo/MONDO_0005724
T183 20052-20075 Disease denotes cryptococcal meningitis http://purl.obolibrary.org/obo/MONDO_0005723
T184 20065-20075 Disease denotes meningitis http://purl.obolibrary.org/obo/MONDO_0004796|http://purl.obolibrary.org/obo/MONDO_0021108
T186 20784-20788 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T187 20793-20802 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T188 20864-20874 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T189 20898-20906 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T190 20971-20989 Disease denotes infectious disease http://purl.obolibrary.org/obo/MONDO_0005550
T191 20991-20999 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T192 21192-21201 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T193 21213-21221 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T194 21291-21302 Disease denotes neutropenia http://purl.obolibrary.org/obo/MONDO_0001475
T195 21336-21363 Disease denotes acquired immunodeficiencies http://purl.obolibrary.org/obo/MONDO_0017769
T196 21369-21374 Disease denotes tumor http://purl.obolibrary.org/obo/MONDO_0005070
T197 21412-21421 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T198 21653-21660 Disease denotes mycosis http://purl.obolibrary.org/obo/MONDO_0002041
T199 21737-21744 Disease denotes mycosis http://purl.obolibrary.org/obo/MONDO_0002041
T200 21875-21883 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T201 22013-22026 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T202 22028-22039 Disease denotes candidiasis http://purl.obolibrary.org/obo/MONDO_0002026
T203 22041-22053 Disease denotes mucormycosis http://purl.obolibrary.org/obo/MONDO_0019136
T204 22058-22072 Disease denotes cryptococcosis http://purl.obolibrary.org/obo/MONDO_0005724
T205 22093-22101 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T206 22177-22186 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 63-64 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T2 231-234 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T3 276-277 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 567-568 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 712-713 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 1140-1141 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T7 1419-1424 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T8 1428-1433 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T9 1564-1567 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T10 1656-1659 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T11 2108-2109 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 2122-2125 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T13 2134-2137 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T14 2140-2147 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T15 2297-2298 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T16 2994-2996 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T17 3847-3849 http://purl.obolibrary.org/obo/CLO_0001407 denotes 52
T18 3893-3895 http://purl.obolibrary.org/obo/CLO_0001407 denotes 52
T19 3931-3932 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T20 3942-3943 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T21 4007-4008 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T22 4271-4273 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T23 4396-4398 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T24 4497-4498 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T25 4791-4792 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T26 4923-4924 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T27 5318-5320 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T28 5515-5517 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T29 6153-6154 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T30 6185-6187 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T31 7031-7033 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T32 7031-7033 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T33 7156-7161 http://purl.obolibrary.org/obo/CLO_0009985 denotes focus
T34 7245-7247 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T35 7355-7360 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T36 7680-7686 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T37 7816-7823 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T38 8179-8186 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T39 8480-8484 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T40 8480-8484 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T41 8883-8892 http://purl.obolibrary.org/obo/CL_0000034 denotes stem cell
T42 8928-8933 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T43 8952-8954 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T44 9032-9040 http://purl.obolibrary.org/obo/CLO_0002368 denotes (CF) [28
T45 9077-9078 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T46 9196-9200 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T47 9196-9200 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T48 9384-9388 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T49 9384-9388 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T50 9410-9411 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T51 9822-9823 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T52 10368-10369 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T53 10656-10657 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T54 10833-10840 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T55 11053-11057 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T56 11061-11066 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T57 11061-11066 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T58 11578-11579 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T59 12257-12262 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T60 12257-12262 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T61 12396-12401 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T62 12438-12443 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T63 12462-12466 http://purl.obolibrary.org/obo/UBERON_0000025 denotes tube
T64 12623-12628 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T65 12623-12628 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T66 12659-12664 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T67 12659-12664 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T68 12801-12805 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T69 12987-12996 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremely
T70 13083-13086 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T71 13103-13108 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T72 13103-13108 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T73 13147-13152 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T74 13265-13266 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T75 13273-13277 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T76 13571-13576 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T77 13665-13666 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T78 13751-13756 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T79 13842-13843 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T80 13977-13982 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T81 14014-14016 http://purl.obolibrary.org/obo/CLO_0050160 denotes T2
T82 14302-14303 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T83 14426-14431 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T84 14426-14431 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T85 14487-14488 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T86 14768-14769 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T87 14820-14827 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test is
T88 14848-14853 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T89 14848-14853 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T90 15200-15202 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T91 15413-15414 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T92 15682-15684 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T93 15841-15845 http://purl.obolibrary.org/obo/UBERON_0000014 denotes skin
T94 15841-15845 http://purl.obolibrary.org/obo/UBERON_0001003 denotes skin
T95 15841-15845 http://purl.obolibrary.org/obo/UBERON_0002097 denotes skin
T96 15841-15845 http://purl.obolibrary.org/obo/UBERON_0002199 denotes skin
T97 15841-15845 http://www.ebi.ac.uk/efo/EFO_0000962 denotes skin
T98 15917-15918 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T99 16102-16104 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T100 16437-16442 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T101 16709-16720 http://purl.obolibrary.org/obo/UBERON_0006314 denotes body fluids
T102 17197-17199 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T103 17507-17508 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T104 17547-17548 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T105 17883-17888 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T106 17906-17911 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T107 17943-17946 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T108 17974-17979 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T109 18325-18326 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T110 18620-18621 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T111 18815-18826 http://purl.obolibrary.org/obo/CLO_0001282 denotes 30 °C for 7
T112 19099-19110 http://purl.obolibrary.org/obo/UBERON_0006314 denotes body fluids
T113 19215-19220 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T114 19270-19274 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T115 19276-19279 http://purl.obolibrary.org/obo/CLO_0007247 denotes LAT
T116 19633-19634 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T117 19696-19699 http://purl.obolibrary.org/obo/NCBITaxon_9596 denotes pan
T118 19829-19830 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T119 19865-19866 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T120 20021-20043 http://purl.obolibrary.org/obo/UBERON_0001017 denotes central nervous system
T121 20021-20043 http://www.ebi.ac.uk/efo/EFO_0000302 denotes central nervous system
T122 20021-20043 http://www.ebi.ac.uk/efo/EFO_0000908 denotes central nervous system
T123 20261-20265 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T124 20282-20294 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T125 20362-20364 http://purl.obolibrary.org/obo/CLO_0037161 denotes en
T126 20471-20472 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T127 20596-20597 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T128 20952-20953 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T129 21071-21075 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T130 21116-21119 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T131 21128-21131 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T132 21134-21140 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T133 21911-21912 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 7-9 Chemical denotes Co http://purl.obolibrary.org/obo/CHEBI_27638
T2 820-826 Chemical denotes glucan http://purl.obolibrary.org/obo/CHEBI_37163
T3 828-841 Chemical denotes galactomannan http://purl.obolibrary.org/obo/CHEBI_27680
T4 1398-1400 Chemical denotes Co http://purl.obolibrary.org/obo/CHEBI_27638
T5 2618-2620 Chemical denotes Co http://purl.obolibrary.org/obo/CHEBI_27638
T6 4234-4244 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718
T7 4245-4253 Chemical denotes medicine http://purl.obolibrary.org/obo/CHEBI_23888
T8 4459-4469 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718
T9 4470-4478 Chemical denotes medicine http://purl.obolibrary.org/obo/CHEBI_23888
T10 4572-4575 Chemical denotes IPA http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802
T12 4737-4740 Chemical denotes IPA http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802
T14 4987-4989 Chemical denotes Co http://purl.obolibrary.org/obo/CHEBI_27638
T15 5688-5691 Chemical denotes IPA http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802
T17 5833-5836 Chemical denotes IPA http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802
T19 6414-6425 Chemical denotes antibiotics http://purl.obolibrary.org/obo/CHEBI_33281
T20 6792-6794 Chemical denotes Co http://purl.obolibrary.org/obo/CHEBI_27638
T21 7031-7033 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T22 7553-7556 Chemical denotes iii http://purl.obolibrary.org/obo/CHEBI_74062
T23 7568-7575 Chemical denotes antigen http://purl.obolibrary.org/obo/CHEBI_59132
T24 7600-7606 Chemical denotes glucan http://purl.obolibrary.org/obo/CHEBI_37163
T25 7622-7635 Chemical denotes galactomannan http://purl.obolibrary.org/obo/CHEBI_27680
T26 7637-7639 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T28 7777-7779 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T29 7806-7815 Chemical denotes biomarker http://purl.obolibrary.org/obo/CHEBI_59163
T30 8153-8163 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718
T31 8188-8191 Chemical denotes AST http://purl.obolibrary.org/obo/CHEBI_76649
T32 8230-8246 Chemical denotes antifungal drugs http://purl.obolibrary.org/obo/CHEBI_35718|http://purl.obolibrary.org/obo/CHEBI_86327
T34 8241-8246 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T35 8255-8258 Chemical denotes AST http://purl.obolibrary.org/obo/CHEBI_76649
T36 8581-8583 Chemical denotes IA http://purl.obolibrary.org/obo/CHEBI_74062
T37 8781-8783 Chemical denotes GC http://purl.obolibrary.org/obo/CHEBI_73890
T38 9011-9013 Chemical denotes HM http://purl.obolibrary.org/obo/CHEBI_74053
T39 9065-9067 Chemical denotes IA http://purl.obolibrary.org/obo/CHEBI_74062
T40 9555-9566 Chemical denotes methenamine http://purl.obolibrary.org/obo/CHEBI_6824
T41 9567-9573 Chemical denotes silver http://purl.obolibrary.org/obo/CHEBI_30512|http://purl.obolibrary.org/obo/CHEBI_9141
T43 9590-9603 Chemical denotes periodic acid http://purl.obolibrary.org/obo/CHEBI_29149
T44 9599-9603 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T45 9612-9615 Chemical denotes PAS http://purl.obolibrary.org/obo/CHEBI_27565
T46 10242-10245 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T47 10420-10422 Chemical denotes IA http://purl.obolibrary.org/obo/CHEBI_74062
T48 10425-10428 Chemical denotes iii http://purl.obolibrary.org/obo/CHEBI_74062
T49 10467-10470 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T50 10777-10785 Chemical denotes reagents http://purl.obolibrary.org/obo/CHEBI_33893
T51 10830-10832 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T53 11432-11437 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T54 11487-11489 Chemical denotes IA http://purl.obolibrary.org/obo/CHEBI_74062
T55 11498-11507 Chemical denotes triazoles http://purl.obolibrary.org/obo/CHEBI_35727
T56 11509-11521 Chemical denotes itraconazole http://purl.obolibrary.org/obo/CHEBI_6076
T57 11523-11535 Chemical denotes voriconazole http://purl.obolibrary.org/obo/CHEBI_10023
T58 11537-11549 Chemical denotes posaconazole http://purl.obolibrary.org/obo/CHEBI_64355
T59 11617-11627 Chemical denotes micafungin http://purl.obolibrary.org/obo/CHEBI_600520
T60 11671-11679 Chemical denotes triazole http://purl.obolibrary.org/obo/CHEBI_38597
T61 11680-11685 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T62 11695-11697 Chemical denotes IA http://purl.obolibrary.org/obo/CHEBI_74062
T63 11720-11724 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T64 11785-11791 Chemical denotes azoles http://purl.obolibrary.org/obo/CHEBI_68452
T65 11802-11807 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T66 11956-11975 Chemical denotes antibacterial drugs http://purl.obolibrary.org/obo/CHEBI_36047
T67 11970-11975 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T68 12347-12351 Chemical denotes gold http://purl.obolibrary.org/obo/CHEBI_29287|http://purl.obolibrary.org/obo/CHEBI_30050
T70 12412-12418 Chemical denotes mannan http://purl.obolibrary.org/obo/CHEBI_28808
T71 13545-13551 Chemical denotes mannan http://purl.obolibrary.org/obo/CHEBI_28808
T72 13684-13690 Chemical denotes mannan http://purl.obolibrary.org/obo/CHEBI_28808
T73 14014-14016 Chemical denotes T2 http://purl.obolibrary.org/obo/CHEBI_29298|http://purl.obolibrary.org/obo/CHEBI_75710
T75 14092-14095 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T76 15287-15299 Chemical denotes echinocandin http://purl.obolibrary.org/obo/CHEBI_57248
T77 15301-15312 Chemical denotes caspofungin http://purl.obolibrary.org/obo/CHEBI_474180
T78 15314-15324 Chemical denotes micafungin http://purl.obolibrary.org/obo/CHEBI_600520
T79 15330-15343 Chemical denotes anidulafungin http://purl.obolibrary.org/obo/CHEBI_55346
T80 15346-15352 Chemical denotes azoles http://purl.obolibrary.org/obo/CHEBI_68452
T81 15354-15365 Chemical denotes fluconazole http://purl.obolibrary.org/obo/CHEBI_46081
T82 15367-15379 Chemical denotes voriconazole http://purl.obolibrary.org/obo/CHEBI_10023
T83 15381-15393 Chemical denotes itraconazole http://purl.obolibrary.org/obo/CHEBI_6076
T84 15455-15461 Chemical denotes azoles http://purl.obolibrary.org/obo/CHEBI_68452
T85 15591-15593 Chemical denotes GC http://purl.obolibrary.org/obo/CHEBI_73890
T86 15599-15601 Chemical denotes HM http://purl.obolibrary.org/obo/CHEBI_74053
T87 16065-16076 Chemical denotes hematoxylin http://purl.obolibrary.org/obo/CHEBI_51686
T88 16089-16092 Chemical denotes PAS http://purl.obolibrary.org/obo/CHEBI_27565
T89 16198-16201 Chemical denotes AST http://purl.obolibrary.org/obo/CHEBI_76649
T90 16404-16407 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T91 16675-16678 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T92 17331-17341 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718
T93 17461-17473 Chemical denotes posaconazole http://purl.obolibrary.org/obo/CHEBI_64355
T94 17509-17514 Chemical denotes lipid http://purl.obolibrary.org/obo/CHEBI_18059
T95 17524-17548 Chemical denotes liposomal Amphotericin B http://purl.obolibrary.org/obo/CHEBI_2682
T96 17553-17565 Chemical denotes posaconazole http://purl.obolibrary.org/obo/CHEBI_64355
T97 17612-17622 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718
T98 17642-17655 Chemical denotes isavuconazole http://purl.obolibrary.org/obo/CHEBI_85979
T99 17749-17759 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718
T100 17783-17791 Chemical denotes polyenes http://purl.obolibrary.org/obo/CHEBI_48121
T101 17796-17802 Chemical denotes azoles http://purl.obolibrary.org/obo/CHEBI_68452
T102 17806-17814 Chemical denotes polyenes http://purl.obolibrary.org/obo/CHEBI_48121
T103 17820-17833 Chemical denotes echinocandins http://purl.obolibrary.org/obo/CHEBI_57248
T104 18798-18806 Chemical denotes dextrose http://purl.obolibrary.org/obo/CHEBI_17634
T105 18807-18811 Chemical denotes agar http://purl.obolibrary.org/obo/CHEBI_2509
T106 18928-18938 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718
T107 19031-19046 Chemical denotes polysaccharides http://purl.obolibrary.org/obo/CHEBI_18154
T108 19131-19134 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T109 19190-19197 Chemical denotes antigen http://purl.obolibrary.org/obo/CHEBI_59132
T110 19353-19356 Chemical denotes LFA http://purl.obolibrary.org/obo/CHEBI_139482
T111 19474-19477 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T112 19712-19715 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T113 19799-19804 Chemical denotes probe http://purl.obolibrary.org/obo/CHEBI_50406
T114 19936-19943 Chemical denotes antigen http://purl.obolibrary.org/obo/CHEBI_59132
T115 20362-20364 Chemical denotes en http://purl.obolibrary.org/obo/CHEBI_30347
T116 20458-20472 Chemical denotes amphotericin B http://purl.obolibrary.org/obo/CHEBI_2682
T117 20473-20485 Chemical denotes deoxycholate http://purl.obolibrary.org/obo/CHEBI_23614
T118 20492-20503 Chemical denotes flucytosine http://purl.obolibrary.org/obo/CHEBI_5100
T119 20517-20528 Chemical denotes fluconazole http://purl.obolibrary.org/obo/CHEBI_46081
T120 20554-20565 Chemical denotes fluconazole http://purl.obolibrary.org/obo/CHEBI_46081
T121 20568-20579 Chemical denotes flucytosine http://purl.obolibrary.org/obo/CHEBI_5100
T122 20583-20597 Chemical denotes amphotericin B http://purl.obolibrary.org/obo/CHEBI_2682
T123 20598-20610 Chemical denotes deoxycholate http://purl.obolibrary.org/obo/CHEBI_23614
T124 20613-20624 Chemical denotes fluconazole http://purl.obolibrary.org/obo/CHEBI_46081
T125 20655-20666 Chemical denotes fluconazole http://purl.obolibrary.org/obo/CHEBI_46081
T126 20669-20672 Chemical denotes iii http://purl.obolibrary.org/obo/CHEBI_74062
T127 20723-20734 Chemical denotes fluconazole http://purl.obolibrary.org/obo/CHEBI_46081
T128 21310-21312 Chemical denotes GC http://purl.obolibrary.org/obo/CHEBI_73890
T129 21542-21548 Chemical denotes glucan http://purl.obolibrary.org/obo/CHEBI_37163
T130 21550-21563 Chemical denotes galactomannan http://purl.obolibrary.org/obo/CHEBI_27680
T131 22324-22326 Chemical denotes Ge http://purl.obolibrary.org/obo/CHEBI_30441

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 6134-6147 http://purl.obolibrary.org/obo/GO_0016046 denotes detect fungus
T2 9250-9261 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation
T3 18698-18705 http://purl.obolibrary.org/obo/GO_0007114 denotes budding
T4 19256-19269 http://purl.obolibrary.org/obo/GO_0007157 denotes agglutination
T5 19256-19269 http://purl.obolibrary.org/obo/GO_0000752 denotes agglutination
T6 21071-21100 http://purl.obolibrary.org/obo/GO_0002443 denotes cell-mediated immune response
T7 21085-21100 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T3 7637-7639 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T4 10830-10832 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T5 21550-21563 GlycoEpitope denotes galactomannan http://www.glycoepitope.jp/epitopes/EP0510
T1 828-841 GlycoEpitope denotes galactomannan http://www.glycoepitope.jp/epitopes/EP0510
T2 7622-7635 GlycoEpitope denotes galactomannan http://www.glycoepitope.jp/epitopes/EP0510

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-62 Sentence denotes Fungal Co-infections Associated with Global COVID-19 Pandemic:
T2 63-111 Sentence denotes A Clinical and Diagnostic Perspective from China
T3 113-121 Sentence denotes Abstract
T4 122-266 Sentence denotes Coronavirus disease 2019 (COVID-19), caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), has been sweeping across the globe.
T5 267-459 Sentence denotes Based on a retrospective analysis of SARS and influenza data from China and worldwide, we surmise that the fungal co-infections associated with global COVID-19 might be missed or misdiagnosed.
T6 460-623 Sentence denotes Although there are few publications, COVID-19 patients, especially severely ill or immunocompromised, have a higher probability of suffering from invasive mycoses.
T7 624-896 Sentence denotes Aspergillus and Candida infections in COVID-19 patients will require early detection by a comprehensive diagnostic intervention (histopathology, direct microscopic examination, culture, (1,3)-β-d-glucan, galactomannan, and PCR-based assays) to ensure effective treatments.
T8 897-1128 Sentence denotes We suggest it is prudent to assess the risk factors, the types of invasive mycosis, the strengths and limitations of diagnostic methods, clinical settings, and the need for standard or individualized treatment in COVID-19 patients.
T9 1129-1332 Sentence denotes We provide a clinical flow diagram to assist the clinicians and laboratory experts in the management of aspergillosis, candidiasis, mucormycosis, or cryptococcosis as co-morbidities in COVID-19 patients.
T10 1334-1411 Sentence denotes The Global Popularity of COVID-19 and the Possibility of Fungal Co-infections
T11 1412-1621 Sentence denotes As the human-to-human transmitted disease, coronavirus disease 2019 (COVID-19), caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), has been an emergency global public health events [1, 2].
T12 1622-1785 Sentence denotes Till May 18th, 2020, the COVID-19 has rapidly spread to 212 countries and caused nearly 5 million laboratory-confirmed cases and more than 310,000 deaths globally.
T13 1786-1981 Sentence denotes Like SARS-CoV and Middle East Respiratory Syndrome Coronavirus (MERS-CoV), SARS-CoV-2 is responsible for lower respiratory infection and can cause Acute Respiratory Distress Syndromes (ARDS) [3].
T14 1982-2152 Sentence denotes Besides, the diffuse alveolar damage with severe inflammatory exudation, COVID-19 patients always have immunosuppression with a decrease in CD4 + T and CD8 + T cells [4].
T15 2153-2412 Sentence denotes Critically ill patients, especially the patients who were admitted to the intensive care unit (ICU) and required mechanical ventilation, or had a longer duration of hospital stays, even as long as 50 days, were more likely to develop fungal co-infections [5].
T16 2413-2593 Sentence denotes Hence, it is important to notice that COVID-19 patients can develop further fungal infections during the middle and latter stages of this disease, especially severely ill ones [6].
T17 2595-2652 Sentence denotes Epidemiology of Fungal Co-infections in COVID-19 Patients
T18 2653-3030 Sentence denotes To analyze the incidence of fungal co-infections in COVID-19 patients, we searched PubMed, Scopus, Embase, and Web of Science, using the keywords “fungi” OR “fungus” OR “fungal infection” OR “invasive fungal diseases” OR “secondary infection” AND “COVID-19” OR “SARS-CoV-2” OR “2019-nCoV” OR “2019 novel coronavirus” without date (up to May 18, 2020) and language restrictions.
T19 3031-3129 Sentence denotes We also searched CNKI and Wanfang Data using the same terms in Chinese, with no time restrictions.
T20 3130-3270 Sentence denotes The title, abstract, and full text of related articles determined according to these search criteria were carefully reviewed by the authors.
T21 3271-3428 Sentence denotes Unfortunately, we have found very few articles reporting on fungal co-infections, not only that, some studies have not provided the details of the pathogens.
T22 3429-3571 Sentence denotes Even so, we found COVID-19 patients, especially severely ill ones or accompanied with immunocompromised state, had co-infections of fungi [7].
T23 3572-3819 Sentence denotes In China, Chen et al. performed fungal culture on all 99 COVID-19 patients at admission and found five (5%, 5/99) cases of fungal infection, including one case of Aspergillus flavus, one case of Candida glabrata and three cases of C. albicans [8].
T24 3820-3975 Sentence denotes Yang et al. found there (3/52, 5.8%) patients had fungal co-infection in 52 critically ill patients, including A. flavus, A. fumigatus and C. albicans [5].
T25 3976-4153 Sentence denotes Other China studies have found a higher percentage of secondary infections (8–15%) in COVID-19 patients, but it is not clear whether it is bacterial or fungal infection [9, 10].
T26 4154-4400 Sentence denotes In addition, one study mentioned that 2.8% (31/1099) patients were treated with antifungal medicine, including 1.9% (18/926) non-severe patients and 7.5% (13/173) severe patients, but there was no etiological evidence of fungal co-infection [11].
T27 4401-4496 Sentence denotes Another study mentioned there was no patient treated with antifungal medicine in 149 cases [4].
T28 4497-4679 Sentence denotes A German study found COVID-19 associated invasive pulmonary aspergillosis (IPA) was found in five (26.3%) of 19 consecutive critically ill patients with moderate to severe ARDS [12].
T29 4680-4809 Sentence denotes In Netherlands, there were six patients (19.4%) presumed IPA in 31 ICU patients, of which five were identified A. fumigatus [13].
T30 4810-4968 Sentence denotes Besides, among the 5 first well-described French COVID-19 patients, an old severely ill man was co-infected with A. flavus by tracheal aspirates culture [14].
T31 4970-5064 Sentence denotes Neglected Fungal Co-infection in COVID-19 Patients by Suggestive Ideas from SARS and Influenza
T32 5065-5218 Sentence denotes Studies have shown that SARS-CoV and SARS-CoV-2 belong to the same species and have the similar prevalence, biological and clinical characteristics [15].
T33 5219-5519 Sentence denotes Looking back on SARS in 2003, we found the incidence of fungal infection in SARS patients was 14.8–27%, which was even higher in severely ill ones, up to 21.9–33% [16, 17], meanwhile, fungal infection was the main cause of death for SARS patients, accounting for 25–73.7% in all causes of death [18].
T34 5520-5668 Sentence denotes Besides, in the past decade, increasing reports of severe influenza pneumonia resulting in ARDS complicated by fungal infection were published [19].
T35 5669-5886 Sentence denotes One research found IPA was diagnosed in 83 (19%) of 432 patients admitted with influenza, which was higher in immunocompromised patients (32%), and in the event of IPA, the mortality will increase from 28 to 51% [20].
T36 5887-6010 Sentence denotes However, as for fungal co-infection in COVID-19 patients, only few studies have reported it, which may have been neglected.
T37 6011-6189 Sentence denotes Clinically, many COVID-19 patients did not undergo sputum fungal assessment at the beginning, moreover, it is difficult to detect fungus with a single sputum fungal culture [11].
T38 6190-6498 Sentence denotes With the disease aggravating, it is easy to attribute the severe respiratory symptoms to COVID-19, at the most considering of the co-infection with bacterium or even mycoplasma [21] which usually leads to the in-time use of antibiotics, while the diagnosis of fungal infection is always delayed or neglected.
T39 6499-6719 Sentence denotes Based on the experience of SARS in 2003 and the cases of invasive aspergillosis combined with severe influenza, it is critically important to pay attention to the probability of COVID-19 accompanied by fungal infections.
T40 6721-6805 Sentence denotes Clinical and Diagnostic Perspective of COVID-19 Associated with Fungal Co-infections
T41 6806-6896 Sentence denotes As the ongoing COVID-19 pandemic, more and more experts are aware of fungal co-infections.
T42 6897-7022 Sentence denotes The French High Council for Public Health recommended to systematically screen for fungal pathogens in COVID-19 patients [6].
T43 7023-7249 Sentence denotes Lanjuan Li academician and her colleagues who have accumulated experience with severe COVID-19 treatment, reminded clinicians should focus on patients’ fungal infections, especially severely ill or immunocompromised ones [22].
T44 7250-7369 Sentence denotes At the early phase of the disease or with extrapulmonary fungal infections, it may present with atypical chest imaging.
T45 7370-7976 Sentence denotes Hence, it is necessary for severely ill patients to receive fungal pathogens surveillance, including (i) etiological examination: direct microscopy and culture; (ii) histopathology; (iii) serology: antigen and antibody, (1,3)-β-d-glucan (BDG) [23] and galactomannan (GM) detection by serum are also need to be tested for suspicious patients, while bronchoalveolar lavage fluid (BALF) and tracheal aspirate (TA) sampling for culture and biomarker testing should be performed under well-protected conditions due to the risk of aerosol spreading and health care worker infections [24]; (iv) PCR-based methods:
T46 7977-8116 Sentence denotes Real-time polymerase chain reaction (PCR) techniques and molecular identification can be performed to identify pathogens if necessary [25].
T47 8117-8247 Sentence denotes After identifying the pathogen, the antifungal susceptibility testing (AST) can be performed to select sensitive antifungal drugs.
T48 8248-8315 Sentence denotes If the AST cannot be carried out, it should be treated empirically.
T49 8316-8423 Sentence denotes The main fungal pathogens for fungal co-infections in severe COVID-19 patients are Aspergillus and Candida.
T50 8424-8555 Sentence denotes Other infrequent opportunistic pathogenic fungus caused lung infections also need to be considered, such as Mucor and Cryptococcus.
T51 8557-8584 Sentence denotes Invasive Aspergillosis (IA)
T52 8585-8728 Sentence denotes Aspergillus species could be an important cause of life-threatening infection in COVID-19 patients, especially in those with high risk factors.
T53 8729-9047 Sentence denotes The potential risk factors for the patients include GC use, prolonged neutropenia, chronic obstructive pulmonary disease (COPD), allogeneic hematopoietic stem cell transplant (allo-HSCT) [26], solid organ transplant (SOT) [27], inherited immunodeficiencies, hemopoietic malignancy (HM), cystic fibrosis (CF) [28], etc.
T54 9048-9307 Sentence denotes The diagnosis of IA requires a microbiologic and/or histopathologic evidence, although specimen acquisition is challenging in many patients because lung biopsy might be contraindicated in patients with coagulation disorders or severe respiratory failure [13].
T55 9308-9786 Sentence denotes Histopathologic examination mainly rely on finding special fungal stains on lung fluid or tissue when a fungal infection is suspected and may reveal the characteristic acute angle branching septate hyphae of Aspergillus spp., and Grocott-Gomori’s methenamine-silver stain (GMS) and periodic acid-Schiff (PAS) stains of fixed tissue will helpful, while it is difficult to distinguish Aspergillus spp. from other filamentous fungi such as Fusarium spp. and Scedosporium spp. [29].
T56 9787-11136 Sentence denotes Therefore, it is necessary to have a definitive confirmation by culture or nonculture technique, including (i) direct microscopic examination with the optical brightener methods, Calcofluor or Blankophor, which may increase the sensitivity and specificity for detecting Aspergillus-like features; (ii) culture on fungal-specific media at 37 °C for 2–5 days, if positive, morphological features of Aspergillus can be identified under the microscope or the DNA sequencing may be used in reference laboratories to identify the species accurately, but usually culture yield is low and a negative result does not exclude the diagnosis of IA; (iii) molecular assays targeting ribosomal DNA (rDNA) sequences can also be used for detection of Aspergillus in tissues or BALF, especially PCR-based assays can be used to detect Aspergillus spp. and CYP51A resistance mutations in A. fumigatus, although these methods have not been standardized or limited by laboratory conditions or proven commercial reagents in some countries [30]; (iv) serum and BALF GM testing are also recommended as an early and accurate marker using less invasive techniques for the diagnosis, especially in neutropenic patients, with advantages of less injury and time-efficient, though sometimes this test in blood samples are less sensitive than cultures of respiratory samples [25].
T57 11137-11420 Sentence denotes The treatment recommendations can be supported by the 2016 Update guideline by the Infectious Diseases Society of America that the prophylaxis, therapeutic medication, combined, and alternative medication of aspergillus infection have been given more detailed guidance opinions [30].
T58 11421-11645 Sentence denotes Generally, drugs recommended for the treatment and prophylaxis of IA include triazoles (itraconazole, voriconazole, posaconazole, esaconazole), Amphotericin B and its liposomes and echinococcins (micafungin or carpofenjing).
T59 11646-11835 Sentence denotes Most patients can choose triazole drugs to treat IA, however, therapeutic drug monitoring (TDM) is recommended and the interaction between azoles and other drugs should be fully considered.
T60 11837-11862 Sentence denotes Invasive Candidiasis (IC)
T61 11863-12192 Sentence denotes For the severe COVID-19 patients who have more opportunities to be treat with broad-spectrum antibacterial drugs, parenteral nutrition and invasive examinations, or the patients accompanied with prolonged neutropenia and other immune impairment factors, the risk of infection with Candida species may significantly increase [31].
T62 12193-12581 Sentence denotes Diagnosis of IC depends on culture methods including culture of blood or other samples collected under sterile conditions which are usually considered as gold standards for IC, and nonculture diagnostic tests including mannan and antimannan IgG tests, C. albicans germ tube antibody (CAGTA), BDG and PCR-based assays, which are now entering clinical practice as adjuncts to cultures [32].
T63 12582-13109 Sentence denotes There are mainly two disadvantages about blood culture, on the one hand, the blood culture time is long, because the average positive alarm time is 2–3 days (range 1 to ≥ 7 days), plus identification and susceptibility test duration 4 to 6 days, on the other hand, it is not sensitive than PCR with much lower detection limit when Candida concentration is ≤ 1 CFU/mL and easy to have failure to detect in extremely low concentrations of candidiasis, intermittent candidiasis or deep Candida infection has not entered the blood.
T64 13110-13257 Sentence denotes Hence, several nonculture diagnostic tests are recommended, but also there is widespread uncertainty about their utility in clinical practice [31].
T65 13258-13535 Sentence denotes BDG is a major cell wall constituent of Candida and most pathogenic fungi, excluding Cryptococcus species, Blastomyces species, and Mucorales, which is widely used in clinical and well recommended by detecting serum, but cannot distinguish between Candida and other fungi [25].
T66 13536-13726 Sentence denotes Besides, mannan and antimannan IgG tests, CAGTA are employed at many European centers, and higher sensitivity and specificity by a combination with mannan/antimannan assay are observed [33].
T67 13727-14004 Sentence denotes There are promising PCR tests, including multiplex-PCR platforms, at the same time, it exists some limitations for a lack of multicenter validation of assay performance, so there are no FDA-cleared PCR assays for Candida, but commercial and in-house tests are widely available.
T68 14005-14166 Sentence denotes Further, T2 magnetic resonance is also can be used by amplifying and detecting Candida DNA, but its feasibility in early diagnosis of candidemia remains unclear.
T69 14167-14505 Sentence denotes MALDI-TOF technology is available in more hospitals with the biggest advantage of its promptness taking no more than 5 min to identify a microorganism from isolated colonies, even researchers have developed protocols to identify yeasts directly from positive blood culture bottles within half an hour without performing a subculture [32].
T70 14506-14795 Sentence denotes Overall, not only it is necessary to fully realize the benefits of combining culture and nonculture methods, but also, clinicians must take the types of IC, the strengths and limitations of each assay and the context of the clinical setting into account to have a judicious interpretation.
T71 14796-14955 Sentence denotes Besides, susceptibility test is recommended for all blood-stream and other clinically relevant Candida isolates, especially for C. glabrata or C. parapsilosis.
T72 14956-15204 Sentence denotes The treatment recommendations can be supported by the 2016 Update guideline by the Infectious Diseases Society of America that the therapeutic and alternative medication of candidiasis infection have been given more detailed guidance opinions [34].
T73 15205-15517 Sentence denotes Generally, patients who are suspected or confirmed with IC should be treated with echinocandin (caspofungin, micafungin, and anidulafungin), azoles (fluconazole, voriconazole, itraconazole), and Amphotericin B and its liposomes, what’s more, TDM for azoles should be used to optimize efficacy and limit toxicity.
T74 15519-15540 Sentence denotes Invasive Mucormycosis
T75 15541-15686 Sentence denotes COVID-19 patients with trauma, diabetes mellitus, GC use, HM, prolonged neutropenia, allo-HSCT, SOT are more likely to develop mucormycosis [35].
T76 15687-15945 Sentence denotes Mucormycosis is usually suspected based on results of direct microscopy or plus fluorescent brighteners from clinical specimens such as sputum, BALF, and skin lesions that Mucorales hyphae are non-septate or pauci-septatethe with a variable width of 6–16 μm.
T77 15946-16106 Sentence denotes To confirm the diagnosis, non-pigmented hyphae showing tissue invasion should be shown in tissue sections stained with hematoxylin–eosin (HE), PAS, or GMS [36].
T78 16107-16202 Sentence denotes Culture of specimens is strongly recommended for identification of genus and species, also AST.
T79 16203-16476 Sentence denotes What’s more, it is suggested to be cultured at 30 °C and 37 °C separately that typically cottony white or grayish black colony usually will be found, afterward morphological identification of fungi or DNA sequencing based on bar code genes, such as 18S, ITS, 28 s, or rDNA.
T80 16477-16633 Sentence denotes MALDI-TOF identification is just moderately supported because it depends mainly on in-house databases, and many laboratories do not have this capacity [37].
T81 16634-16844 Sentence denotes Further, it is promising to detect fungi DNA, in serum as well as in other body fluids, even in paraffin-embedded tissue, however, because of lack of standardization supported it is only with moderate strength.
T82 16845-17201 Sentence denotes The treatment recommendations can be supported by the global guideline for the diagnosis and management of mucormycosis in 2019 by European Confederation of Medical Mycology (ECMM) and Mycoses Study Group Education and Research Consortium that the therapeutic and alternative medication of mucormycosis have been given more detailed guidance opinions [35].
T83 17202-17352 Sentence denotes Generally, it strongly supports an early complete surgical treatment for mucormycosis whenever possible, in addition to systemic antifungal treatment.
T84 17353-17493 Sentence denotes In neutropenic patients, those with graft-versus-host disease or high risk factor, primary prophylaxis with posaconazole may be recommended.
T85 17494-17699 Sentence denotes Amphotericin B lipid complex, liposomal Amphotericin B and posaconazole oral suspension are treated as the first-line antifungal monotherapy, while isavuconazole is strongly supported as salvage treatment.
T86 17700-17834 Sentence denotes There are no convincing data to guide the use of antifungal combination therapy of polyenes and azoles or polyenes plus echinocandins.
T87 17836-17859 Sentence denotes Invasive Cryptococcosis
T88 17860-18115 Sentence denotes COVID-19 patients with human immunodeficiency virus (HIV) infection accompanied by CD4 + T-lymphocyte count < 200 cells/μL, allo-HSCT, SOT, or other immune impaired are susceptible to cryptococcosis which predominantly present as meningoencephalitis [38].
T89 18116-18379 Sentence denotes Given the complexities surrounding the diagnosis of cryptococcosis and identification of Cryptococcus species including C. neoformans and C. gattii species, the diagnosis of cryptococcosis is usually based on a combination of clinical and laboratory confirmation.
T90 18380-18504 Sentence denotes The methods used to confirm the infection are culture, direct microscopy, histopathology, serology, and molecular detection.
T91 18505-18747 Sentence denotes To diagnose cryptococcosis, specimen from cerebrospinal fluid (CSF) can be mixed with India ink and observed under a microscope that the distinctive structure for Cryptococcus spp. with narrow budding encapsulated yeasts usually can be found.
T92 18748-18875 Sentence denotes Samples for culture should be placed on Sabouraud dextrose agar at 30 °C for 7 days, in aerobic conditions, and observed daily.
T93 18876-18973 Sentence denotes Moreover, cultures from patients receiving systemic antifungal therapy might need longer to grow.
T94 18974-19021 Sentence denotes Cryptococcus appears as mucoid creamy colonies.
T95 19022-19159 Sentence denotes Capsular polysaccharides of Cryptococcus can be detected and quantified from body fluids such as serum, CSF, BAL, or pathological tissue.
T96 19160-19358 Sentence denotes Three formats of cryptococcal antigen (CrAg) detection tests are currently available: the latex agglutination test (LAT), the enzyme-linked immunoassay (EIA), and the lateral flow immunoassay (LFA).
T97 19359-19509 Sentence denotes These methods are rapid, sensitive, and specific, but have not been standardized for respiratory specimens such as BAL, pleural fluid, or sputum [32].
T98 19510-19663 Sentence denotes Molecular detection of Cryptococcus is required in specific situations where other diagnostic tools have failed to confirm a diagnosis of cryptococcosis.
T99 19664-19823 Sentence denotes These molecular methods include pan-fungal PCR, DNA sequencing for identification, multiplex PCR, isothermal amplification method, and probe-based microarrays.
T100 19824-19982 Sentence denotes Once a diagnosis cryptococcosis is made, a lumbar puncture and cerebrospinal fluid (CSF) examination (including antigen) are recommended in all patients [39].
T101 19983-20076 Sentence denotes Cryptococcus can disseminate into the central nervous system causing cryptococcal meningitis.
T102 20077-20367 Sentence denotes The treatment recommendations can be supported by guidelines for the diagnosis, prevention, and management of cryptococcal disease in HIV-infected adults, adolescents, and children in 2018 by World Health Organization (from: https://www.who.int/hiv/pub/guidelines/cryptococcal-disease/en/).
T103 20368-20735 Sentence denotes Generally, the following is recommended as the preferred regimen: (i) Induction phase for amphotericin B deoxycholate and + flucytosine, followed by fluconazole; alternative options for fluconazole + flucytosine or amphotericin B deoxycholate + fluconazole. (ii) Consolidation phase for fluconazole. (iii) Maintenance (or secondary prophylaxis) phase for fluconazole.
T104 20737-20744 Sentence denotes Summary
T105 20745-20939 Sentence denotes By analyzing retrospective analysis of SARS and influenza data from China and worldwide, we surmise that the fungal co-infections associated with global COVID-19 might be missed or misdiagnosed.
T106 20940-21202 Sentence denotes Further, as a life-threatening infectious disease, COVID-19 patients showed overexpression of inflammatory cytokines, and impaired cell-mediated immune response with decreased CD4 + T and CD8 + T cell counts, indicating its susceptibility to fungal co-infection.
T107 21203-21422 Sentence denotes Moreover, COVID-19 patients accompanied with immunocompromised state, such as prolonged neutropenia, HSCT, GC use, SOT, inherited or acquired immunodeficiencies, and tumor are more likely to develop fungal co-infection.
T108 21423-21661 Sentence denotes Here, we summarized updated diagnostic information (histopathology, direct microscopic examination, culture, (1,3)-β-d-glucan, galactomannan, PCR-based assays, MALDI-TOF technology, etc.) and treatment recommendations of invasive mycosis.
T109 21662-21893 Sentence denotes We suggest it is prudent to assess the risk factors, the types of invasive mycosis, the strengths and limitations of diagnostic methods, clinical settings, and the need for standard or individualized treatment in COVID-19 patients.
T110 21894-22111 Sentence denotes Finally, provide a clinical flow diagram (Fig. 1) to assist the clinicians and laboratory experts in the management of aspergillosis, candidiasis, mucormycosis, or cryptococcosis as comorbidities in COVID-19 patients.
T111 22112-22186 Sentence denotes Fig. 1 Diagnostic and therapeutic pathway for invasive fungal co-infection
T112 22188-22204 Sentence denotes Publisher's Note
T113 22205-22323 Sentence denotes Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
T114 22324-22389 Sentence denotes Ge Song and Guanzhao Liang have contributed equally to this work.
T115 22391-22398 Sentence denotes Funding
T116 22399-22527 Sentence denotes This work was supported by The subitem of the Important and Special Project of the Science and Technology Ministry of China (No.
T117 22528-22582 Sentence denotes 2018ZX10734404) and National Pathogen Resource Center.
T118 22584-22617 Sentence denotes Compliance with Ethical Standards
T119 22619-22639 Sentence denotes Conflict of interest
T120 22640-22699 Sentence denotes The authors declare that they have no conflict of interest.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 1897-1918 Phenotype denotes respiratory infection http://purl.obolibrary.org/obo/HP_0011947
T2 1939-1959 Phenotype denotes Respiratory Distress http://purl.obolibrary.org/obo/HP_0002098
T3 1995-2018 Phenotype denotes diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T4 4538-4570 Phenotype denotes invasive pulmonary aspergillosis http://purl.obolibrary.org/obo/HP_0020103
T5 4572-4575 Phenotype denotes IPA http://purl.obolibrary.org/obo/HP_0020103
T6 4737-4740 Phenotype denotes IPA http://purl.obolibrary.org/obo/HP_0020103
T7 5588-5597 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T8 5688-5691 Phenotype denotes IPA http://purl.obolibrary.org/obo/HP_0020103
T9 5833-5836 Phenotype denotes IPA http://purl.obolibrary.org/obo/HP_0020103
T10 8799-8810 Phenotype denotes neutropenia http://purl.obolibrary.org/obo/HP_0001875
T11 8812-8849 Phenotype denotes chronic obstructive pulmonary disease http://purl.obolibrary.org/obo/HP_0006510
T12 8851-8855 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T13 8967-8985 Phenotype denotes immunodeficiencies http://purl.obolibrary.org/obo/HP_0002721
T14 9282-9301 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878
T15 12068-12079 Phenotype denotes neutropenia http://purl.obolibrary.org/obo/HP_0001875
T16 15572-15589 Phenotype denotes diabetes mellitus http://purl.obolibrary.org/obo/HP_0000819
T17 15613-15624 Phenotype denotes neutropenia http://purl.obolibrary.org/obo/HP_0001875
T18 17889-17905 Phenotype denotes immunodeficiency http://purl.obolibrary.org/obo/HP_0002721
T19 20052-20075 Phenotype denotes cryptococcal meningitis http://purl.obolibrary.org/obo/HP_0032160
T20 21291-21302 Phenotype denotes neutropenia http://purl.obolibrary.org/obo/HP_0001875
T21 21345-21363 Phenotype denotes immunodeficiencies http://purl.obolibrary.org/obo/HP_0002721
T22 21369-21374 Phenotype denotes tumor http://purl.obolibrary.org/obo/HP_0002664

2_test

Id Subject Object Predicate Lexical cue
32737747-32015507-73473585 1615-1616 32015507 denotes 1
32737747-32123347-73473586 1618-1619 32123347 denotes 2
32737747-32910461-73473587 1978-1979 32910461 denotes 3
32737747-32731000-73473588 2149-2150 32731000 denotes 4
32737747-32598906-73473589 2409-2410 32598906 denotes 5
32737747-32334948-73473590 2590-2591 32334948 denotes 6
32737747-31849894-73473591 3568-3569 31849894 denotes 7
32737747-32007143-73473592 3816-3817 32007143 denotes 8
32737747-32598906-73473593 3972-3973 32598906 denotes 5
32737747-31986264-73473594 4146-4147 31986264 denotes 9
32737747-32253449-73473595 4149-4151 32253449 denotes 10
32737747-32220206-73473596 4396-4398 32220206 denotes 11
32737747-32731000-73473597 4493-4494 32731000 denotes 4
32737747-32339350-73473598 4675-4677 32339350 denotes 12
32737747-32687390-73473599 4805-4807 32687390 denotes 13
32737747-32224310-73473600 4964-4966 32224310 denotes 14
32737747-32086938-73473601 5214-5216 32086938 denotes 15
32737747-14552675-73473602 5515-5517 14552675 denotes 18
32737747-32160910-73473603 5664-5666 32160910 denotes 19
32737747-30076119-73473604 5882-5884 30076119 denotes 20
32737747-32220206-73473605 6185-6187 32220206 denotes 11
32737747-30506286-73473606 6368-6370 30506286 denotes 21
32737747-32334948-73473607 7019-7020 32334948 denotes 6
32737747-32275128-73473608 7245-7247 32275128 denotes 22
32737747-28378239-73473609 7614-7616 28378239 denotes 23
32737747-32395423-73473610 7948-7950 32395423 denotes 24
32737747-28124219-73473611 8917-8919 28124219 denotes 26
32737747-32233057-73473612 8952-8954 32233057 denotes 27
32737747-32303430-73473613 9038-9040 32303430 denotes 28
32737747-32687390-73473614 9303-9305 32687390 denotes 13
32737747-22517788-73473615 9782-9784 22517788 denotes 29
32737747-27365388-73473616 10805-10807 27365388 denotes 30
32737747-27365388-73473617 11416-11418 27365388 denotes 30
32737747-29444828-73473618 12188-12190 29444828 denotes 31
32737747-28882009-73473619 12577-12579 28882009 denotes 32
32737747-29444828-73473620 13253-13255 29444828 denotes 31
32737747-21143834-73473621 13722-13724 21143834 denotes 33
32737747-28882009-73473622 14501-14503 28882009 denotes 32
32737747-26679628-73473623 15200-15202 26679628 denotes 34
32737747-31699664-73473624 15682-15684 31699664 denotes 35
32737747-29538730-73473625 16102-16104 29538730 denotes 36
32737747-30203997-73473626 16629-16631 30203997 denotes 37
32737747-31699664-73473627 17197-17199 31699664 denotes 35
32737747-30329097-73473628 18111-18113 30329097 denotes 38
32737747-28882009-73473629 19505-19507 28882009 denotes 32
32737747-29663539-73473630 19978-19980 29663539 denotes 39