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PMC:7388103 / 1444-2630 JSONTXT

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LitCovid_Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T11 696-703 https://glytoucan.org/Structures/Glycans/G00021MO denotes Heparin
T12 696-703 https://glytoucan.org/Structures/Glycans/G54161DR denotes Heparin
T13 914-921 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T14 914-921 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T12 567-575 Body_part denotes platelet http://purl.org/sig/ont/fma/fma62851
T13 696-703 Body_part denotes Heparin http://purl.org/sig/ont/fma/fma82839
T14 914-921 Body_part denotes heparin http://purl.org/sig/ont/fma/fma82839

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T25 447-463 Disease denotes Thrombocytopenia http://purl.obolibrary.org/obo/MONDO_0002049
T26 634-642 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T27 643-652 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T28 658-674 Disease denotes thrombocytopenia http://purl.obolibrary.org/obo/MONDO_0002049
T29 696-728 Disease denotes Heparin-induced thrombocytopenia http://purl.obolibrary.org/obo/MONDO_0018048
T30 712-728 Disease denotes thrombocytopenia http://purl.obolibrary.org/obo/MONDO_0002049
T31 730-733 Disease denotes HIT http://purl.obolibrary.org/obo/MONDO_0018048
T32 757-773 Disease denotes thrombocytopenia http://purl.obolibrary.org/obo/MONDO_0002049
T33 893-901 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T34 937-940 Disease denotes HIT http://purl.obolibrary.org/obo/MONDO_0018048
T35 990-993 Disease denotes HIT http://purl.obolibrary.org/obo/MONDO_0018048
T36 1021-1029 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T37 1030-1039 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T38 1112-1115 Disease denotes HIT http://purl.obolibrary.org/obo/MONDO_0018048
T39 1151-1154 Disease denotes HIT http://purl.obolibrary.org/obo/MONDO_0018048

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T20 93-94 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T21 233-236 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T22 406-407 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T23 464-467 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T24 523-524 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T25 552-555 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T26 738-739 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T27 980-981 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T28 997-998 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T10 696-703 Chemical denotes Heparin http://purl.obolibrary.org/obo/CHEBI_28304
T11 914-921 Chemical denotes heparin http://purl.obolibrary.org/obo/CHEBI_28304

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T17 0-12 Sentence denotes Introduction
T18 13-133 Sentence denotes An outbreak of novel coronavirus (2019-nCoV) that began in Wuhan, China, is now a major public health concern worldwide.
T19 134-446 Sentence denotes After the first reported case in the state of Washington, the number of cases in the United States has rapidly increased to over 2 000 000 with more than 100 000 deaths.1 In addition to the typical presentation of respiratory symptoms, hematologic complications have been a significant concern in these patients.
T20 447-816 Sentence denotes Thrombocytopenia has been reported in up to 55% of patients with COVID-19.2 A meta-analysis of 9 studies has shown that platelet counts were significantly lower in those with more severe COVID-19 infection, and thrombocytopenia predicts mortality.2 Heparin-induced thrombocytopenia (HIT) is a differential for thrombocytopenia, especially in the intensive care setting.
T21 817-1040 Sentence denotes In one review, the authors suggested that clinicians routinely evaluate all COVID-19 patients on heparin for indices of HIT by performing the 4T score.3 We report a case of HIT in a patient with critical COVID-19 infection.
T22 1041-1186 Sentence denotes Also, we briefly describe 4 other cases that were initially managed as HIT, until proven later not to be true HIT, based on the functional assay.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T14 447-463 Phenotype denotes Thrombocytopenia http://purl.obolibrary.org/obo/HP_0001873
T15 658-674 Phenotype denotes thrombocytopenia http://purl.obolibrary.org/obo/HP_0001873
T16 696-728 Phenotype denotes Heparin-induced thrombocytopenia http://purl.obolibrary.org/obo/HP_0011874
T17 730-733 Phenotype denotes HIT http://purl.obolibrary.org/obo/HP_0011874
T18 757-773 Phenotype denotes thrombocytopenia http://purl.obolibrary.org/obo/HP_0001873
T19 937-940 Phenotype denotes HIT http://purl.obolibrary.org/obo/HP_0011874
T20 990-993 Phenotype denotes HIT http://purl.obolibrary.org/obo/HP_0011874
T21 1112-1115 Phenotype denotes HIT http://purl.obolibrary.org/obo/HP_0011874
T22 1151-1154 Phenotype denotes HIT http://purl.obolibrary.org/obo/HP_0011874

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
61 28-45 Species denotes novel coronavirus Tax:2697049
62 47-56 Species denotes 2019-nCoV Tax:2697049
63 437-445 Species denotes patients Tax:9606
64 296-302 Disease denotes deaths MESH:D003643
65 348-368 Disease denotes respiratory symptoms MESH:D012818
87 498-506 Species denotes patients Tax:9606
88 902-910 Species denotes patients Tax:9606
89 999-1006 Species denotes patient Tax:9606
90 696-703 Chemical denotes Heparin MESH:D006493
91 914-921 Chemical denotes heparin MESH:D006493
92 447-463 Disease denotes Thrombocytopenia MESH:D013921
93 512-520 Disease denotes COVID-19 MESH:C000657245
94 634-642 Disease denotes COVID-19 MESH:C000657245
95 643-652 Disease denotes infection MESH:D007239
96 658-674 Disease denotes thrombocytopenia MESH:D013921
97 684-693 Disease denotes mortality MESH:D003643
98 712-728 Disease denotes thrombocytopenia MESH:D013921
99 730-733 Disease denotes HIT MESH:D013921
100 757-773 Disease denotes thrombocytopenia MESH:D013921
101 893-901 Disease denotes COVID-19 MESH:C000657245
102 937-940 Disease denotes HIT MESH:D013921
103 990-993 Disease denotes HIT MESH:D013921
104 1021-1029 Disease denotes COVID-19 MESH:C000657245
105 1030-1039 Disease denotes infection MESH:D007239
106 1112-1115 Disease denotes HIT MESH:D013921
107 1151-1154 Disease denotes HIT MESH:D013921

2_test

Id Subject Object Predicate Lexical cue
32720827-32178975-61488848 521-522 32178975 denotes 2
32720827-32178975-61488849 694-695 32178975 denotes 2
32720827-32282949-61488850 968-969 32282949 denotes 3