PMC:7386875 / 9505-10406
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T52 | 413-420 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T102 | 21-29 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T103 | 113-117 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T104 | 122-140 | Disease | denotes | multiorgan failure | http://purl.obolibrary.org/obo/MONDO_0043726 |
| T105 | 305-313 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T106 | 464-482 | Disease | denotes | hypercoagulability | http://purl.obolibrary.org/obo/MONDO_0002305 |
| T107 | 612-621 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T108 | 811-819 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T77 | 45-46 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T78 | 323-324 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T79 | 695-706 | http://purl.obolibrary.org/obo/PR_000007299 | denotes | prothrombin |
| T80 | 716-725 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activated |
| T81 | 787-788 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T44 | 413-420 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T13 | 464-482 | Phenotype | denotes | hypercoagulability | http://purl.obolibrary.org/obo/HP_0100724 |
| T14 | 642-662 | Phenotype | denotes | abnormal coagulation | http://purl.obolibrary.org/obo/HP_0001928 |
| T15 | 685-711 | Phenotype | denotes | prolonged prothrombin time | http://purl.obolibrary.org/obo/HP_0008151 |
| T16 | 855-880 | Phenotype | denotes | coagulation abnormalities | http://purl.obolibrary.org/obo/HP_0001928 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T24 | 188-210 | http://purl.obolibrary.org/obo/GO_0045087 | denotes | innate immune response |
| T25 | 195-210 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune response |
| T26 | 651-662 | http://purl.obolibrary.org/obo/GO_0050817 | denotes | coagulation |
| T27 | 855-866 | http://purl.obolibrary.org/obo/GO_0050817 | denotes | coagulation |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T47 | 0-901 | Sentence | denotes | Patients with severe COVID-19 appear to have a hyperinflammatory response, which is linked to the development of ARDS and multiorgan failure.6 However, it is now well appreciated that the innate immune response and thrombotic response are closely linked (Figure 2) and accordingly in patients with severe COVID-19 there is a correlation with elevated acute phase reactants, such as fibrinogen and CRP (C-reactive protein), which may contribute to COVID-associated hypercoagulability.7–9 Moreover, these biomarkers and acute phase reactants are associated with adverse clinical outcomes and increased severity of infection.7,9,10 In addition, abnormal coagulation parameters, including prolonged prothrombin time and activated partial thromboplastin time, are found to be associated with a higher mortality from COVID-19, demonstrating the significance of coagulation abnormalities in this population.3 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32586214-32353251-21597671 | 141-142 | 32353251 | denotes | 6 |
| 32586214-32344321-21597672 | 483-484 | 32344321 | denotes | 7 |
| 32586214-32464112-21597672 | 483-484 | 32464112 | denotes | 7 |
| 32586214-32320677-21597672 | 483-484 | 32320677 | denotes | 7 |
| 32586214-32344321-21597673 | 622-623 | 32344321 | denotes | 7 |
| 32586214-32320677-21597674 | 624-625 | 32320677 | denotes | 9 |
| 32586214-32073213-21597675 | 626-628 | 32073213 | denotes | 10 |
| 32586214-32284615-21597676 | 900-901 | 32284615 | denotes | 3 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 377 | 382-392 | Gene | denotes | fibrinogen | Gene:2244 |
| 378 | 397-400 | Gene | denotes | CRP | Gene:1401 |
| 379 | 402-420 | Gene | denotes | C-reactive protein | Gene:1401 |
| 381 | 0-8 | Species | denotes | Patients | Tax:9606 |
| 382 | 284-292 | Species | denotes | patients | Tax:9606 |
| 386 | 21-29 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 387 | 113-117 | Disease | denotes | ARDS | MESH:D012128 |
| 388 | 122-140 | Disease | denotes | multiorgan failure | MESH:D009102 |
| 389 | 215-225 | Disease | denotes | thrombotic | MESH:D013927 |
| 390 | 305-313 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 391 | 447-452 | Disease | denotes | COVID | MESH:C000657245 |
| 392 | 464-482 | Disease | denotes | hypercoagulability | MESH:D019851 |
| 393 | 612-621 | Disease | denotes | infection | MESH:D007239 |
| 394 | 642-662 | Disease | denotes | abnormal coagulation | MESH:D025861 |
| 395 | 796-805 | Disease | denotes | mortality | MESH:D003643 |
| 396 | 811-819 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 397 | 855-880 | Disease | denotes | coagulation abnormalities | MESH:D025861 |