PMC:7386875 / 6010-6605
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T14 | 54-58 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T15 | 116-120 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T16 | 207-224 | Body_part | denotes | epithelial tissue | http://purl.org/sig/ont/fma/fma9639 |
| T17 | 269-274 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T18 | 366-376 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
| T19 | 436-443 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T5 | 218-224 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T73 | 231-239 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T74 | 246-254 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T75 | 456-464 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T76 | 502-510 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T39 | 4-6 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T40 | 54-58 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T41 | 77-79 | http://purl.obolibrary.org/obo/CLO_0008922 | denotes | S2 |
| T42 | 77-79 | http://purl.obolibrary.org/obo/CLO_0050052 | denotes | S2 |
| T43 | 116-120 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T44 | 207-224 | http://purl.obolibrary.org/obo/UBERON_0000483 | denotes | epithelial tissue |
| T45 | 263-274 | http://purl.obolibrary.org/obo/CLO_0053065 | denotes | human cells |
| T46 | 366-385 | http://purl.obolibrary.org/obo/CHEBI_33708 | denotes | amino acid residues |
| T47 | 366-385 | http://purl.obolibrary.org/obo/PR_000036907 | denotes | amino acid residues |
| T48 | 533-534 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T49 | 573-581 | http://purl.obolibrary.org/obo/UBERON_0007651 | denotes | junction |
| T50 | 585-587 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T51 | 592-594 | http://purl.obolibrary.org/obo/CLO_0008922 | denotes | S2 |
| T52 | 592-594 | http://purl.obolibrary.org/obo/CLO_0050052 | denotes | S2 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T14 | 77-79 | Chemical | denotes | S2 | http://purl.obolibrary.org/obo/CHEBI_29387 |
| T15 | 151-153 | Chemical | denotes | GP | http://purl.obolibrary.org/obo/CHEBI_70744 |
| T16 | 163-166 | Chemical | denotes | DPP | http://purl.obolibrary.org/obo/CHEBI_34680|http://purl.obolibrary.org/obo/CHEBI_60069 |
| T18 | 290-301 | Chemical | denotes | angiotensin | http://purl.obolibrary.org/obo/CHEBI_48433 |
| T19 | 366-376 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T20 | 366-371 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T21 | 372-376 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T22 | 436-443 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T23 | 592-594 | Chemical | denotes | S2 | http://purl.obolibrary.org/obo/CHEBI_29387 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10 | 116-127 | http://purl.obolibrary.org/obo/GO_0140253 | denotes | cell fusion |
| T11 | 116-127 | http://purl.obolibrary.org/obo/GO_0045026 | denotes | cell fusion |
| T12 | 116-127 | http://purl.obolibrary.org/obo/GO_0000768 | denotes | cell fusion |
| T13 | 116-127 | http://purl.obolibrary.org/obo/GO_0000747 | denotes | cell fusion |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T30 | 0-595 | Sentence | denotes | The S1 subunit is responsible for binding to the host cell receptor, and the S2 subunit assists with viral and host cell fusion.1 While the MERS-CoV S GP binds to DPP-4 (dipeptidyl peptidase 4) expressed on epithelial tissue, both SARS-CoV-2 and SARS-CoV bind to human cells via the ACE-2 (angiotensin-converting enzyme 2) receptor.5 In addition to having different amino acid residues within the RBD (receptor-binding domain) of the S protein compared to SARS-CoV, another novel structural feature of SARS-CoV-2, is the presence of a polybasic furin cleavage site, at the junction of S1 and S2. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32586214-32155444-21597668 | 128-129 | 32155444 | denotes | 1 |
| 32586214-32142651-21597669 | 332-333 | 32142651 | denotes | 5 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 249 | 163-168 | Gene | denotes | DPP-4 | Gene:1803 |
| 250 | 170-192 | Gene | denotes | dipeptidyl peptidase 4 | Gene:1803 |
| 251 | 283-288 | Gene | denotes | ACE-2 | Gene:59272 |
| 252 | 290-321 | Gene | denotes | angiotensin-converting enzyme 2 | Gene:59272 |
| 257 | 545-550 | Gene | denotes | furin | Gene:5045 |
| 260 | 140-148 | Species | denotes | MERS-CoV | Tax:1335626 |
| 261 | 231-241 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 262 | 246-254 | Species | denotes | SARS-CoV | Tax:694009 |
| 263 | 263-268 | Species | denotes | human | Tax:9606 |
| 264 | 456-464 | Species | denotes | SARS-CoV | Tax:694009 |
| 265 | 502-512 | Species | denotes | SARS-CoV-2 | Tax:2697049 |