PMC:7386875 / 20964-21883
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T148 | 94-109 | Body_part | denotes | (interleukin)-6 | http://purl.org/sig/ont/fma/fma264829 |
T149 | 95-106 | Body_part | denotes | interleukin | http://purl.org/sig/ont/fma/fma86578 |
T150 | 111-115 | Body_part | denotes | IL-1 | http://purl.org/sig/ont/fma/fma86583 |
T151 | 145-153 | Body_part | denotes | monocyte | http://purl.org/sig/ont/fma/fma62864 |
T152 | 170-177 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T153 | 187-197 | Body_part | denotes | macrophage | http://purl.org/sig/ont/fma/fma63261 |
T154 | 211-218 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T155 | 264-273 | Body_part | denotes | cytokines | http://purl.org/sig/ont/fma/fma84050 |
T156 | 396-400 | Body_part | denotes | ICAM | http://purl.org/sig/ont/fma/fma67857 |
T157 | 438-446 | Body_part | denotes | integrin | http://purl.org/sig/ont/fma/fma67222 |
T158 | 460-470 | Body_part | denotes | E-selectin | http://purl.org/sig/ont/fma/fma62932 |
T159 | 506-515 | Body_part | denotes | cytokines | http://purl.org/sig/ont/fma/fma84050 |
T160 | 520-530 | Body_part | denotes | chemokines | http://purl.org/sig/ont/fma/fma241981 |
T161 | 547-558 | Body_part | denotes | endothelium | http://purl.org/sig/ont/fma/fma63916 |
T162 | 644-653 | Body_part | denotes | platelets | http://purl.org/sig/ont/fma/fma62851 |
T163 | 658-668 | Body_part | denotes | leukocytes | http://purl.org/sig/ont/fma/fma62852 |
T164 | 817-823 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T40 | 547-558 | Body_part | denotes | endothelium | http://purl.obolibrary.org/obo/UBERON_0001986 |
T41 | 817-823 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T195 | 29-37 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T196 | 890-898 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T193 | 94-109 | http://purl.obolibrary.org/obo/PR_000001393 | denotes | (interleukin)-6 |
T194 | 145-153 | http://purl.obolibrary.org/obo/CL_0000576 | denotes | monocyte |
T195 | 239-241 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
T196 | 547-558 | http://purl.obolibrary.org/obo/UBERON_0001986 | denotes | endothelium |
T197 | 566-567 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T198 | 856-857 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T99 | 91-93 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
T101 | 111-113 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
T103 | 123-133 | Chemical | denotes | interferon | http://purl.obolibrary.org/obo/CHEBI_52999 |
T104 | 138-141 | Chemical | denotes | MCP | http://purl.obolibrary.org/obo/CHEBI_132592|http://purl.obolibrary.org/obo/CHEBI_50099 |
T106 | 170-177 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T107 | 211-218 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T108 | 231-237 | Chemical | denotes | CXCL10 | http://purl.obolibrary.org/obo/CHEBI_138157 |
T109 | 377-386 | Chemical | denotes | molecules | http://purl.obolibrary.org/obo/CHEBI_25367 |
T110 | 425-433 | Chemical | denotes | molecule | http://purl.obolibrary.org/obo/CHEBI_25367 |
T111 | 756-770 | Chemical | denotes | anticoagulants | http://purl.obolibrary.org/obo/CHEBI_50249 |
T112 | 832-834 | Chemical | denotes | TF | http://purl.obolibrary.org/obo/CHEBI_74862 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T39 | 911-918 | Phenotype | denotes | hypoxia | http://purl.obolibrary.org/obo/HP_0012418 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T84 | 0-919 | Sentence | denotes | Interestingly, patients with SARS-CoV-2 have been demonstrated to have increased levels of IL (interleukin)-6, IL-1β, IFN (interferon)-γ, MCP-1 (monocyte chemoattractant protein 1), MIP (macrophage inflammatory protein), and IP10 (CXCL10).11 These proinflammatory cytokines can disrupt endothelial function and integrity leading to the release of VWF, upregulation of adhesion molecules, such as ICAM (intercellular adhesion molecule)-1, integrin αvβ3, P- and E-selectin, and the production of endothelial cytokines and chemokines.56,57 Thus, the endothelium adopts a proinflammatory and procoagulant phenotype that supports the recruitment of platelets and leukocytes.58,59 Furthermore, these changes are associated with the downregulation of the natural anticoagulants and corresponding upregulation of endothelial tissue factor (TF, CD142).57 Moreover, a common finding in patients with COVID-19 is profound hypoxia. |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32586214-31986264-21597711 | 239-241 | 31986264 | denotes | 11 |
32586214-9517590-21597712 | 531-533 | 9517590 | denotes | 56 |
32586214-12543869-21597713 | 534-536 | 12543869 | denotes | 57 |
32586214-9657750-21597714 | 669-671 | 9657750 | denotes | 58 |
32586214-7507411-21597715 | 672-674 | 7507411 | denotes | 59 |
32586214-12543869-21597716 | 843-845 | 12543869 | denotes | 57 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
790 | 91-109 | Gene | denotes | IL (interleukin)-6 | Gene:3569 |
791 | 111-116 | Gene | denotes | IL-1β | Gene:3552 |
792 | 118-121 | Gene | denotes | IFN | Gene:3439 |
793 | 123-136 | Gene | denotes | interferon)-γ | Gene:3458 |
794 | 138-143 | Gene | denotes | MCP-1 | Gene:6347 |
795 | 145-179 | Gene | denotes | monocyte chemoattractant protein 1 | Gene:6347 |
796 | 225-229 | Gene | denotes | IP10 | Gene:3627 |
797 | 231-237 | Gene | denotes | CXCL10 | Gene:3627 |
798 | 347-350 | Gene | denotes | VWF | Gene:7450 |
799 | 402-436 | Gene | denotes | intercellular adhesion molecule)-1 | Gene:3383 |
800 | 438-451 | Gene | denotes | integrin αvβ3 | Gene:3685 |
801 | 460-470 | Gene | denotes | E-selectin | Gene:6401 |
802 | 832-834 | Gene | denotes | TF | Gene:2152 |
803 | 836-841 | Gene | denotes | CD142 | Gene:2152 |
806 | 15-23 | Species | denotes | patients | Tax:9606 |
807 | 29-39 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
808 | 876-884 | Species | denotes | patients | Tax:9606 |
809 | 182-185 | Gene | denotes | MIP | Gene:4284 |
810 | 817-830 | Gene | denotes | tissue factor | Gene:2152 |
811 | 890-898 | Disease | denotes | COVID-19 | MESH:C000657245 |
812 | 911-918 | Disease | denotes | hypoxia | MESH:D000860 |