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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 622-639 Body_part denotes endothelial cells http://purl.org/sig/ont/fma/fma66772
T2 634-639 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T3 711-727 Body_part denotes endothelial cell http://purl.org/sig/ont/fma/fma66772
T4 723-727 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T5 857-865 Body_part denotes platelet http://purl.org/sig/ont/fma/fma62851
T6 871-880 Body_part denotes leukocyte http://purl.org/sig/ont/fma/fma62852
T7 1049-1053 Body_part denotes vein http://purl.org/sig/ont/fma/fma50723
T8 1163-1169 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1044-1053 Body_part denotes deep vein http://purl.obolibrary.org/obo/UBERON_0035552
T2 1049-1053 Body_part denotes vein http://purl.obolibrary.org/obo/UBERON_0001638

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T5 11-19 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T6 158-182 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T7 184-192 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T8 287-297 Disease denotes thrombosis http://purl.obolibrary.org/obo/MONDO_0000831
T9 299-320 Disease denotes venous thromboembolic http://purl.obolibrary.org/obo/MONDO_0005399
T10 334-340 Disease denotes stroke http://purl.obolibrary.org/obo/MONDO_0005098|http://purl.obolibrary.org/obo/MONDO_0011057
T12 402-410 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T13 435-453 Disease denotes multiorgan failure http://purl.obolibrary.org/obo/MONDO_0043726
T14 566-574 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T15 601-609 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T16 763-771 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T17 799-811 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T18 1054-1064 Disease denotes thrombosis http://purl.obolibrary.org/obo/MONDO_0000831
T19 1066-1084 Disease denotes pulmonary embolism http://purl.obolibrary.org/obo/MONDO_0005279
T20 1090-1096 Disease denotes stroke http://purl.obolibrary.org/obo/MONDO_0005098|http://purl.obolibrary.org/obo/MONDO_0011057
T22 1183-1199 Disease denotes thrombocytopenia http://purl.obolibrary.org/obo/MONDO_0002049
T23 1238-1246 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 55-58 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T2 69-70 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T3 137-140 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T4 213-214 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 622-639 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cells
T6 711-727 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cell
T7 824-834 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T8 1049-1053 http://purl.obolibrary.org/obo/UBERON_0001638 denotes vein
T9 1049-1053 http://www.ebi.ac.uk/efo/EFO_0000816 denotes vein
T10 1115-1125 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T11 1163-1169 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 651-662 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 306-328 Phenotype denotes thromboembolic disease http://purl.obolibrary.org/obo/HP_0001907
T2 334-340 Phenotype denotes stroke http://purl.obolibrary.org/obo/HP_0001297
T3 1044-1064 Phenotype denotes deep vein thrombosis http://purl.obolibrary.org/obo/HP_0002625
T4 1066-1084 Phenotype denotes pulmonary embolism http://purl.obolibrary.org/obo/HP_0002204
T5 1090-1096 Phenotype denotes stroke http://purl.obolibrary.org/obo/HP_0001297
T6 1183-1199 Phenotype denotes thrombocytopenia http://purl.obolibrary.org/obo/HP_0001873

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 799-811 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T2 813-834 http://purl.obolibrary.org/obo/GO_0006956 denotes complement activation
T3 927-952 http://purl.obolibrary.org/obo/GO_0002250 denotes adaptive immune responses
T4 1115-1140 http://purl.obolibrary.org/obo/GO_0050820 denotes activation of coagulation
T5 1129-1140 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T4 116-341 Sentence denotes Recent clinical data has highlighted that coronavirus disease 2019 (COVID-19) is associated with a significant risk of thrombotic complications ranging from microvascular thrombosis, venous thromboembolic disease, and stroke.
T5 342-478 Sentence denotes Importantly, thrombotic complications are markers of severe COVID-19 and are associated with multiorgan failure and increased mortality.
T6 479-736 Sentence denotes The evidence to date supports the concept that the thrombotic manifestations of severe COVID-19 are due to the ability of SARS-CoV-2 to invade endothelial cells via ACE-2 (angiotensin-converting enzyme 2), which is expressed on the endothelial cell surface.
T7 737-1097 Sentence denotes However, in patients with COVID-19 the subsequent endothelial inflammation, complement activation, thrombin generation, platelet, and leukocyte recruitment, and the initiation of innate and adaptive immune responses culminate in immunothrombosis, ultimately causing (micro)thrombotic complications, such as deep vein thrombosis, pulmonary embolism, and stroke.
T8 1098-1247 Sentence denotes Accordingly, the activation of coagulation (eg, as measured with plasma D-dimer) and thrombocytopenia have emerged as prognostic markers in COVID-19.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
48 644-649 Gene denotes ACE-2 Gene:59272
49 651-682 Gene denotes angiotensin-converting enzyme 2 Gene:59272
50 836-844 Gene denotes thrombin Gene:2147
52 11-21 Species denotes SARS-CoV-2 Tax:2697049
53 601-611 Species denotes SARS-CoV-2 Tax:2697049
54 749-757 Species denotes patients Tax:9606
60 158-182 Disease denotes coronavirus disease 2019 MESH:C000657245
61 184-192 Disease denotes COVID-19 MESH:C000657245
62 235-259 Disease denotes thrombotic complications MESH:D013927
63 287-297 Disease denotes thrombosis MESH:D013927
64 299-328 Disease denotes venous thromboembolic disease MESH:D054556
65 334-340 Disease denotes stroke MESH:D020521
66 355-379 Disease denotes thrombotic complications MESH:D013927
67 402-410 Disease denotes COVID-19 MESH:C000657245
68 435-453 Disease denotes multiorgan failure MESH:D009102
69 468-477 Disease denotes mortality MESH:D003643
70 530-540 Disease denotes thrombotic MESH:D013927
71 566-574 Disease denotes COVID-19 MESH:C000657245
72 763-771 Disease denotes COVID-19 MESH:C000657245
73 799-811 Disease denotes inflammation MESH:D007249
74 966-982 Disease denotes immunothrombosis
75 1010-1034 Disease denotes thrombotic complications MESH:D013927
76 1044-1064 Disease denotes deep vein thrombosis MESH:D020246
77 1066-1084 Disease denotes pulmonary embolism MESH:D011655
78 1090-1096 Disease denotes stroke MESH:D020521
79 1183-1199 Disease denotes thrombocytopenia MESH:D013921
80 1238-1246 Disease denotes COVID-19 MESH:C000657245
81 1254-1278 Disease denotes thrombotic complications MESH:D013927