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PMC:7386875 / 136-1279 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 644-661 Body_part denotes endothelial cells http://purl.org/sig/ont/fma/fma66772
T2 656-661 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T3 733-749 Body_part denotes endothelial cell http://purl.org/sig/ont/fma/fma66772
T4 745-749 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T5 879-887 Body_part denotes platelet http://purl.org/sig/ont/fma/fma62851
T6 893-902 Body_part denotes leukocyte http://purl.org/sig/ont/fma/fma62852
T7 1071-1075 Body_part denotes vein http://purl.org/sig/ont/fma/fma50723

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1066-1075 Body_part denotes deep vein http://purl.obolibrary.org/obo/UBERON_0035552
T2 1071-1075 Body_part denotes vein http://purl.obolibrary.org/obo/UBERON_0001638

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T5 33-41 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T6 180-204 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T7 206-214 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T8 309-319 Disease denotes thrombosis http://purl.obolibrary.org/obo/MONDO_0000831
T9 321-342 Disease denotes venous thromboembolic http://purl.obolibrary.org/obo/MONDO_0005399
T10 356-362 Disease denotes stroke http://purl.obolibrary.org/obo/MONDO_0005098|http://purl.obolibrary.org/obo/MONDO_0011057
T12 424-432 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T13 457-475 Disease denotes multiorgan failure http://purl.obolibrary.org/obo/MONDO_0043726
T14 588-596 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T15 623-631 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T16 785-793 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T17 821-833 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T18 1076-1086 Disease denotes thrombosis http://purl.obolibrary.org/obo/MONDO_0000831
T19 1088-1106 Disease denotes pulmonary embolism http://purl.obolibrary.org/obo/MONDO_0005279
T20 1112-1118 Disease denotes stroke http://purl.obolibrary.org/obo/MONDO_0005098|http://purl.obolibrary.org/obo/MONDO_0011057

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 77-80 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T2 91-92 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T3 159-162 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T4 235-236 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 644-661 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cells
T6 733-749 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cell
T7 846-856 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T8 1071-1075 http://purl.obolibrary.org/obo/UBERON_0001638 denotes vein
T9 1071-1075 http://www.ebi.ac.uk/efo/EFO_0000816 denotes vein

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 673-684 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 328-350 Phenotype denotes thromboembolic disease http://purl.obolibrary.org/obo/HP_0001907
T2 356-362 Phenotype denotes stroke http://purl.obolibrary.org/obo/HP_0001297
T3 1066-1086 Phenotype denotes deep vein thrombosis http://purl.obolibrary.org/obo/HP_0002625
T4 1088-1106 Phenotype denotes pulmonary embolism http://purl.obolibrary.org/obo/HP_0002204
T5 1112-1118 Phenotype denotes stroke http://purl.obolibrary.org/obo/HP_0001297

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 821-833 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T2 835-856 http://purl.obolibrary.org/obo/GO_0006956 denotes complement activation
T3 949-974 http://purl.obolibrary.org/obo/GO_0002250 denotes adaptive immune responses

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T4 138-363 Sentence denotes Recent clinical data has highlighted that coronavirus disease 2019 (COVID-19) is associated with a significant risk of thrombotic complications ranging from microvascular thrombosis, venous thromboembolic disease, and stroke.
T5 364-500 Sentence denotes Importantly, thrombotic complications are markers of severe COVID-19 and are associated with multiorgan failure and increased mortality.
T6 501-758 Sentence denotes The evidence to date supports the concept that the thrombotic manifestations of severe COVID-19 are due to the ability of SARS-CoV-2 to invade endothelial cells via ACE-2 (angiotensin-converting enzyme 2), which is expressed on the endothelial cell surface.
T7 759-1119 Sentence denotes However, in patients with COVID-19 the subsequent endothelial inflammation, complement activation, thrombin generation, platelet, and leukocyte recruitment, and the initiation of innate and adaptive immune responses culminate in immunothrombosis, ultimately causing (micro)thrombotic complications, such as deep vein thrombosis, pulmonary embolism, and stroke.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
48 666-671 Gene denotes ACE-2 Gene:59272
49 673-704 Gene denotes angiotensin-converting enzyme 2 Gene:59272
50 858-866 Gene denotes thrombin Gene:2147
52 33-43 Species denotes SARS-CoV-2 Tax:2697049
53 623-633 Species denotes SARS-CoV-2 Tax:2697049
54 771-779 Species denotes patients Tax:9606
60 180-204 Disease denotes coronavirus disease 2019 MESH:C000657245
61 206-214 Disease denotes COVID-19 MESH:C000657245
62 257-281 Disease denotes thrombotic complications MESH:D013927
63 309-319 Disease denotes thrombosis MESH:D013927
64 321-350 Disease denotes venous thromboembolic disease MESH:D054556
65 356-362 Disease denotes stroke MESH:D020521
66 377-401 Disease denotes thrombotic complications MESH:D013927
67 424-432 Disease denotes COVID-19 MESH:C000657245
68 457-475 Disease denotes multiorgan failure MESH:D009102
69 490-499 Disease denotes mortality MESH:D003643
70 552-562 Disease denotes thrombotic MESH:D013927
71 588-596 Disease denotes COVID-19 MESH:C000657245
72 785-793 Disease denotes COVID-19 MESH:C000657245
73 821-833 Disease denotes inflammation MESH:D007249
74 988-1004 Disease denotes immunothrombosis
75 1032-1056 Disease denotes thrombotic complications MESH:D013927
76 1066-1086 Disease denotes deep vein thrombosis MESH:D020246
77 1088-1106 Disease denotes pulmonary embolism MESH:D011655
78 1112-1118 Disease denotes stroke MESH:D020521