PMC:7386785 / 19890-20781
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T68183 | 309-313 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T81530 | 337-342 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T27415 | 355-360 | Body_part | denotes | heart | http://purl.org/sig/ont/fma/fma7088 |
| T37635 | 671-677 | Body_part | denotes | muscle | http://purl.org/sig/ont/fma/fma32558 |
| T51076 | 856-861 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T21 | 309-313 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T22 | 337-342 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T23 | 355-360 | Body_part | denotes | heart | http://purl.obolibrary.org/obo/UBERON_0000948 |
| T24 | 856-861 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T106 | 100-108 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T107 | 146-154 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T108 | 155-164 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T109 | 428-436 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T110 | 616-625 | Disease | denotes | diarrhoea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T111 | 761-770 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T80089 | 6-10 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T65698 | 309-313 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T72756 | 309-313 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T23488 | 337-342 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T48874 | 337-342 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T94108 | 355-360 | http://purl.obolibrary.org/obo/UBERON_0000948 | denotes | heart |
| T49796 | 355-360 | http://purl.obolibrary.org/obo/UBERON_0007100 | denotes | heart |
| T56741 | 355-360 | http://purl.obolibrary.org/obo/UBERON_0015228 | denotes | heart |
| T83654 | 355-360 | http://www.ebi.ac.uk/efo/EFO_0000815 | denotes | heart |
| T23522 | 520-521 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T16070 | 671-677 | http://purl.obolibrary.org/obo/UBERON_0001630 | denotes | muscle |
| T29860 | 671-677 | http://purl.obolibrary.org/obo/UBERON_0005090 | denotes | muscle |
| T36265 | 671-677 | http://www.ebi.ac.uk/efo/EFO_0000801 | denotes | muscle |
| T84942 | 671-677 | http://www.ebi.ac.uk/efo/EFO_0001949 | denotes | muscle |
| T93156 | 856-861 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T67 | 155-164 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T68 | 224-229 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T69 | 233-239 | Phenotype | denotes | nausea | http://purl.obolibrary.org/obo/HP_0002018 |
| T70 | 466-475 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
| T71 | 490-498 | Phenotype | denotes | coughing | http://purl.obolibrary.org/obo/HP_0012735 |
| T72 | 556-564 | Phenotype | denotes | coughing | http://purl.obolibrary.org/obo/HP_0012735 |
| T73 | 588-593 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T74 | 616-625 | Phenotype | denotes | diarrhoea | http://purl.obolibrary.org/obo/HP_0002014 |
| T75 | 627-635 | Phenotype | denotes | headache | http://purl.obolibrary.org/obo/HP_0002315 |
| T76 | 671-682 | Phenotype | denotes | muscle pain | http://purl.obolibrary.org/obo/HP_0003326 |
| T77 | 684-691 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T78 | 761-770 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T79 | 832-836 | Phenotype | denotes | pain | http://purl.obolibrary.org/obo/HP_0012531 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13 | 705-719 | http://purl.obolibrary.org/obo/GO_0007608 | denotes | sense of smell |
| T14 | 724-729 | http://purl.obolibrary.org/obo/GO_0050909 | denotes | taste |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T233 | 0-13 | Sentence | denotes | Index test(s) |
| T234 | 15-33 | Sentence | denotes | Signs and symptoms |
| T235 | 34-165 | Sentence | denotes | Signs and symptoms are used in the initial diagnosis of suspected COVID‐19 disease, and to identify people with COVID‐19 pneumonia. |
| T236 | 166-240 | Sentence | denotes | Symptoms are what is experienced by patients, for example cough or nausea. |
| T237 | 241-366 | Sentence | denotes | Signs are what can be evaluated by clinical assessment, for example lung auscultation findings, blood pressure or heart rate. |
| T238 | 367-730 | Sentence | denotes | Key symptoms that have been associated with mild to moderate COVID‐19 disease include: troublesome dry cough (for example, coughing more than usual over a one‐hour period, or three or more coughing episodes in 24 hours), fever greater than 37.8 °C, diarrhoea, headache, breathlessness on light exertion, muscle pain, fatigue, and loss of sense of smell and taste. |
| T239 | 731-891 | Sentence | denotes | Red flags indicating possible pneumonia include breathlessness at rest, loss of appetite, confusion, pain or pressure in the chest, and temperature above 38 °C. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 470 | 134-140 | Species | denotes | people | Tax:9606 |
| 471 | 202-210 | Species | denotes | patients | Tax:9606 |
| 472 | 100-108 | Disease | denotes | COVID‐19 | MESH:C000657245 |
| 473 | 146-164 | Disease | denotes | COVID‐19 pneumonia | MESH:C000657245 |
| 474 | 224-229 | Disease | denotes | cough | MESH:D003371 |
| 475 | 233-239 | Disease | denotes | nausea | MESH:D009325 |
| 489 | 735-740 | Species | denotes | flags | Tax:34205 |
| 490 | 428-436 | Disease | denotes | COVID‐19 | MESH:C000657245 |
| 491 | 466-475 | Disease | denotes | dry cough | MESH:D003371 |
| 492 | 490-498 | Disease | denotes | coughing | MESH:D003371 |
| 493 | 556-564 | Disease | denotes | coughing | MESH:D003371 |
| 494 | 588-593 | Disease | denotes | fever | MESH:D005334 |
| 495 | 616-625 | Disease | denotes | diarrhoea | MESH:D003967 |
| 496 | 627-635 | Disease | denotes | headache | MESH:D006261 |
| 497 | 671-682 | Disease | denotes | muscle pain | MESH:D063806 |
| 498 | 684-691 | Disease | denotes | fatigue | MESH:D005221 |
| 499 | 761-770 | Disease | denotes | pneumonia | MESH:D011014 |
| 500 | 803-819 | Disease | denotes | loss of appetite | MESH:D001068 |
| 501 | 832-836 | Disease | denotes | pain | MESH:D010146 |