PMC:7386785 / 113639-114673 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7386785","sourcedb":"PMC","sourceid":"7386785","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7386785","text":"Facility cases: positive SARS‐CoV‐2Facility controls: negative SARS‐CoV‐2Country: ChinaDates: 20 January 2020‐05 February 2020Symptoms and severity: in positives: non‐severe (n = 31), including mild or moderate patients to severe (n = 42) including severe or critical patientsMild: patients had no pneumonia on imaging (CT)\nModerate: patients with symptoms and imaging examination showing pneumonia\nSevere: patients meet any of the following:\nrespiratory rate ≥ 30/min\nresting pulse SpO2 ≤ 93%\nPaO2/FiO2 ≤ 300 mmHg (1 mmHg = 0.133 kPa)\nmultiple pulmonary lobes showing more than 50% progression of lesion in 24‐48 hours on imaging\nCritical: patients meet any of the following:\nrespiratory failure requiring mechanical ventilation\nshock\ncombination of other organ failure that requires admission to ICU\nDemographics: M/F: cases 46/27, controls 104/127\u2028median age: cases 53.0 years (43.5‐62.0) controls 34 years (29‐49)Exposure history: Wuhan‐related exposure and or close contact to confirmed COVID‐19 case: cases 40.7%, controls 57.5%","divisions":[{"label":"p","span":{"begin":276,"end":323}},{"label":"p","span":{"begin":324,"end":398}},{"label":"p","span":{"begin":399,"end":442}},{"label":"p","span":{"begin":443,"end":468}},{"label":"p","span":{"begin":469,"end":493}},{"label":"p","span":{"begin":494,"end":535}},{"label":"p","span":{"begin":536,"end":630}},{"label":"p","span":{"begin":631,"end":676}},{"label":"p","span":{"begin":677,"end":729}},{"label":"p","span":{"begin":730,"end":735}},{"label":"p","span":{"begin":736,"end":801}}],"tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T10","span":{"begin":545,"end":560},"obj":"Body_part"},{"id":"T11","span":{"begin":757,"end":762},"obj":"Body_part"}],"attributes":[{"id":"A10","pred":"fma_id","subj":"T10","obj":"http://purl.org/sig/ont/fma/fma7311"},{"id":"A11","pred":"fma_id","subj":"T11","obj":"http://purl.org/sig/ont/fma/fma67498"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T82","span":{"begin":757,"end":762},"obj":"Body_part"}],"attributes":[{"id":"A82","pred":"uberon_id","subj":"T82","obj":"http://purl.obolibrary.org/obo/UBERON_0000062"},{"subj":"T82","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T390","span":{"begin":298,"end":307},"obj":"Phenotype"},{"id":"T391","span":{"begin":389,"end":398},"obj":"Phenotype"},{"id":"T392","span":{"begin":677,"end":696},"obj":"Phenotype"},{"id":"T393","span":{"begin":730,"end":735},"obj":"Phenotype"}],"attributes":[{"id":"A390","pred":"hp_id","subj":"T390","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A391","pred":"hp_id","subj":"T391","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A392","pred":"hp_id","subj":"T392","obj":"http://purl.obolibrary.org/obo/HP_0002878"},{"id":"A393","pred":"hp_id","subj":"T393","obj":"http://purl.obolibrary.org/obo/HP_0031273"},{"subj":"T390","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T391","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T392","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T393","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T471","span":{"begin":25,"end":29},"obj":"Disease"},{"id":"T472","span":{"begin":63,"end":67},"obj":"Disease"},{"id":"T473","span":{"begin":298,"end":307},"obj":"Disease"},{"id":"T474","span":{"begin":389,"end":398},"obj":"Disease"},{"id":"T475","span":{"begin":677,"end":696},"obj":"Disease"},{"id":"T476","span":{"begin":992,"end":1000},"obj":"Disease"}],"attributes":[{"id":"A471","pred":"mondo_id","subj":"T471","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A472","pred":"mondo_id","subj":"T472","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A473","pred":"mondo_id","subj":"T473","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A474","pred":"mondo_id","subj":"T474","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A475","pred":"mondo_id","subj":"T475","obj":"http://purl.obolibrary.org/obo/MONDO_0021113"},{"id":"A476","pred":"mondo_id","subj":"T476","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"subj":"T471","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T472","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T473","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T474","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T475","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T476","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T92","span":{"begin":611,"end":613},"obj":"http://purl.obolibrary.org/obo/CLO_0001382"},{"id":"T93","span":{"begin":757,"end":762},"obj":"http://purl.obolibrary.org/obo/UBERON_0003103"},{"id":"T94","span":{"begin":830,"end":832},"obj":"http://purl.obolibrary.org/obo/CLO_0050509"},{"id":"T95","span":{"begin":901,"end":903},"obj":"http://purl.obolibrary.org/obo/CLO_0001302"}],"attributes":[{"subj":"T92","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T93","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T94","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T95","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T1349","span":{"begin":82,"end":93},"obj":"Sentence"},{"id":"T1350","span":{"begin":94,"end":323},"obj":"Sentence"},{"id":"T1351","span":{"begin":324,"end":398},"obj":"Sentence"},{"id":"T1352","span":{"begin":399,"end":442},"obj":"Sentence"},{"id":"T1353","span":{"begin":443,"end":468},"obj":"Sentence"},{"id":"T1354","span":{"begin":469,"end":493},"obj":"Sentence"},{"id":"T1355","span":{"begin":494,"end":535},"obj":"Sentence"},{"id":"T1356","span":{"begin":536,"end":630},"obj":"Sentence"},{"id":"T1357","span":{"begin":631,"end":676},"obj":"Sentence"},{"id":"T1358","span":{"begin":677,"end":729},"obj":"Sentence"},{"id":"T1359","span":{"begin":730,"end":735},"obj":"Sentence"},{"id":"T1360","span":{"begin":736,"end":801},"obj":"Sentence"},{"id":"T1361","span":{"begin":802,"end":934},"obj":"Sentence"},{"id":"T1362","span":{"begin":935,"end":1034},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T1349","pred":"source","obj":"LitCovid-sentences"},{"subj":"T1350","pred":"source","obj":"LitCovid-sentences"},{"subj":"T1351","pred":"source","obj":"LitCovid-sentences"},{"subj":"T1352","pred":"source","obj":"LitCovid-sentences"},{"subj":"T1353","pred":"source","obj":"LitCovid-sentences"},{"subj":"T1354","pred":"source","obj":"LitCovid-sentences"},{"subj":"T1355","pred":"source","obj":"LitCovid-sentences"},{"subj":"T1356","pred":"source","obj":"LitCovid-sentences"},{"subj":"T1357","pred":"source","obj":"LitCovid-sentences"},{"subj":"T1358","pred":"source","obj":"LitCovid-sentences"},{"subj":"T1359","pred":"source","obj":"LitCovid-sentences"},{"subj":"T1360","pred":"source","obj":"LitCovid-sentences"},{"subj":"T1361","pred":"source","obj":"LitCovid-sentences"},{"subj":"T1362","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"2058","span":{"begin":25,"end":35},"obj":"Species"},{"id":"2059","span":{"begin":63,"end":73},"obj":"Species"},{"id":"2060","span":{"begin":211,"end":219},"obj":"Species"},{"id":"2061","span":{"begin":282,"end":290},"obj":"Species"},{"id":"2062","span":{"begin":334,"end":342},"obj":"Species"},{"id":"2063","span":{"begin":407,"end":415},"obj":"Species"},{"id":"2064","span":{"begin":641,"end":649},"obj":"Species"}],"attributes":[{"id":"A2058","pred":"tao:has_database_id","subj":"2058","obj":"Tax:2697049"},{"id":"A2059","pred":"tao:has_database_id","subj":"2059","obj":"Tax:2697049"},{"id":"A2060","pred":"tao:has_database_id","subj":"2060","obj":"Tax:9606"},{"id":"A2061","pred":"tao:has_database_id","subj":"2061","obj":"Tax:9606"},{"id":"A2062","pred":"tao:has_database_id","subj":"2062","obj":"Tax:9606"},{"id":"A2063","pred":"tao:has_database_id","subj":"2063","obj":"Tax:9606"},{"id":"A2064","pred":"tao:has_database_id","subj":"2064","obj":"Tax:9606"},{"subj":"2058","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2059","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2060","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2061","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2062","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2063","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2064","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#ecc793","default":true},{"id":"LitCovid-PD-UBERON","color":"#ad93ec"},{"id":"LitCovid-PD-HP","color":"#93ec93"},{"id":"LitCovid-PD-MONDO","color":"#ec93ad"},{"id":"LitCovid-PD-CLO","color":"#93c7ec"},{"id":"LitCovid-sentences","color":"#e1ec93"},{"id":"LitCovid-PubTator","color":"#dd93ec"}]}]}}