PMC:7381711 / 19940-21053
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T174 | 44-51 | Body_part | denotes | heparin | http://purl.org/sig/ont/fma/fma82839 |
T175 | 95-104 | Body_part | denotes | Heparin’s | http://purl.org/sig/ont/fma/fma82839 |
T176 | 414-430 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
T177 | 425-430 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T178 | 483-495 | Body_part | denotes | cell surface | http://purl.org/sig/ont/fma/fma67653 |
T179 | 483-487 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T180 | 496-511 | Body_part | denotes | heparan sulfate | http://purl.org/sig/ont/fma/fma63023 |
T181 | 519-526 | Body_part | denotes | heparin | http://purl.org/sig/ont/fma/fma82839 |
T182 | 560-567 | Body_part | denotes | heparin | http://purl.org/sig/ont/fma/fma82839 |
T183 | 641-648 | Body_part | denotes | heparin | http://purl.org/sig/ont/fma/fma82839 |
T184 | 847-854 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T185 | 858-860 | Body_part | denotes | HS | http://purl.org/sig/ont/fma/fma63023 |
T186 | 862-877 | Body_part | denotes | heparan sulfate | http://purl.org/sig/ont/fma/fma63023 |
T187 | 879-881 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
T188 | 883-894 | Body_part | denotes | interleukin | http://purl.org/sig/ont/fma/fma86578 |
T189 | 942-948 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
T190 | 963-969 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
T191 | 1029-1035 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T21 | 942-948 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
T22 | 963-969 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
T23 | 1029-1035 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
708 | 172-188 | Gene | denotes | antithrombin-III | Gene:462 |
709 | 190-193 | Gene | denotes | AT3 | Gene:462 |
710 | 793-797 | Gene | denotes | ACE2 | Gene:59272 |
711 | 799-830 | Gene | denotes | angiotensin-converting enzyme 2 | Gene:59272 |
712 | 832-835 | Gene | denotes | APC | Gene:324 |
713 | 896-901 | Gene | denotes | PAI-1 | Gene:5054 |
714 | 903-936 | Gene | denotes | plasminogen activator inhibitor 1 | Gene:5054 |
715 | 957-961 | Gene | denotes | TFPI | Gene:7035 |
716 | 963-994 | Gene | denotes | tissue factor pathway inhibitor | Gene:7035 |
717 | 996-999 | Gene | denotes | TNF | Gene:7124 |
718 | 1059-1062 | Gene | denotes | uPA | Gene:5328 |
719 | 942-955 | Gene | denotes | tissue factor | Gene:2152 |
720 | 1029-1057 | Gene | denotes | tissue plasminogen activator | Gene:100128998 |
721 | 321-368 | Species | denotes | Severe acute respiratory syndrome coronavirus 2 | Tax:2697049 |
722 | 370-380 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
723 | 44-51 | Chemical | denotes | heparin | MESH:D006493 |
724 | 95-102 | Chemical | denotes | Heparin | MESH:D006493 |
725 | 496-511 | Chemical | denotes | heparan sulfate | MESH:D006497 |
726 | 519-526 | Chemical | denotes | heparin | MESH:D006493 |
727 | 560-567 | Chemical | denotes | heparin | MESH:D006493 |
728 | 641-648 | Chemical | denotes | heparin | MESH:D006493 |
729 | 862-877 | Chemical | denotes | heparan sulfate | MESH:D006497 |
730 | 55-79 | Disease | denotes | coronavirus disease 2019 | MESH:C000657245 |
731 | 81-89 | Disease | denotes | COVID-19 | MESH:C000657245 |
732 | 251-263 | Disease | denotes | coagulopathy | MESH:D001778 |
733 | 291-301 | Disease | denotes | thrombosis | MESH:D013927 |
734 | 712-720 | Disease | denotes | COVID-19 | MESH:C000657245 |
735 | 1001-1015 | Disease | denotes | tumor necrosis | MESH:D009336 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T166 | 55-79 | Disease | denotes | coronavirus disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T167 | 81-89 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T168 | 251-263 | Disease | denotes | coagulopathy | http://purl.obolibrary.org/obo/MONDO_0001531 |
T169 | 291-301 | Disease | denotes | thrombosis | http://purl.obolibrary.org/obo/MONDO_0000831 |
T170 | 321-368 | Disease | denotes | Severe acute respiratory syndrome coronavirus 2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T171 | 370-378 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T172 | 370-374 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T173 | 712-720 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T174 | 1001-1006 | Disease | denotes | tumor | http://purl.obolibrary.org/obo/MONDO_0005070 |
T175 | 1059-1062 | Disease | denotes | uPA | http://purl.obolibrary.org/obo/MONDO_0004041 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T142 | 414-424 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
T143 | 425-430 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T144 | 483-487 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T145 | 649-652 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T146 | 837-846 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activated |
T147 | 903-914 | http://purl.obolibrary.org/obo/PR_000012867 | denotes | plasminogen |
T148 | 915-924 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activator |
T149 | 1024-1027 | http://purl.obolibrary.org/obo/CLO_0053275 | denotes | tPA |
T150 | 1024-1027 | http://purl.obolibrary.org/obo/CLO_0053276 | denotes | tPA |
T151 | 1024-1027 | http://purl.obolibrary.org/obo/CLO_0053277 | denotes | tPA |
T152 | 1036-1047 | http://purl.obolibrary.org/obo/PR_000012867 | denotes | plasminogen |
T153 | 1048-1057 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activator |
T154 | 1074-1085 | http://purl.obolibrary.org/obo/PR_000012867 | denotes | plasminogen |
T155 | 1086-1095 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activator |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T221 | 44-51 | Chemical | denotes | heparin | http://purl.obolibrary.org/obo/CHEBI_28304 |
T222 | 128-141 | Chemical | denotes | anticoagulant | http://purl.obolibrary.org/obo/CHEBI_50249 |
T223 | 496-511 | Chemical | denotes | heparan sulfate | http://purl.obolibrary.org/obo/CHEBI_28815 |
T224 | 496-503 | Chemical | denotes | heparan | http://purl.obolibrary.org/obo/CHEBI_24500 |
T225 | 504-511 | Chemical | denotes | sulfate | http://purl.obolibrary.org/obo/CHEBI_16189 |
T226 | 519-526 | Chemical | denotes | heparin | http://purl.obolibrary.org/obo/CHEBI_28304 |
T227 | 560-567 | Chemical | denotes | heparin | http://purl.obolibrary.org/obo/CHEBI_28304 |
T228 | 573-578 | Chemical | denotes | drugs | http://purl.obolibrary.org/obo/CHEBI_23888 |
T229 | 641-648 | Chemical | denotes | heparin | http://purl.obolibrary.org/obo/CHEBI_28304 |
T230 | 799-810 | Chemical | denotes | angiotensin | http://purl.obolibrary.org/obo/CHEBI_48433 |
T231 | 832-835 | Chemical | denotes | APC | http://purl.obolibrary.org/obo/CHEBI_80551 |
T232 | 847-854 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T233 | 858-860 | Chemical | denotes | HS | http://purl.obolibrary.org/obo/CHEBI_74056|http://purl.obolibrary.org/obo/CHEBI_28815 |
T235 | 862-877 | Chemical | denotes | heparan sulfate | http://purl.obolibrary.org/obo/CHEBI_28815 |
T236 | 862-869 | Chemical | denotes | heparan | http://purl.obolibrary.org/obo/CHEBI_24500 |
T237 | 870-877 | Chemical | denotes | sulfate | http://purl.obolibrary.org/obo/CHEBI_16189 |
T238 | 879-881 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
T240 | 925-934 | Chemical | denotes | inhibitor | http://purl.obolibrary.org/obo/CHEBI_35222 |
T241 | 938-940 | Chemical | denotes | TF | http://purl.obolibrary.org/obo/CHEBI_74862 |
T242 | 977-994 | Chemical | denotes | pathway inhibitor | http://purl.obolibrary.org/obo/CHEBI_76932 |
T243 | 985-994 | Chemical | denotes | inhibitor | http://purl.obolibrary.org/obo/CHEBI_35222 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T41 | 903-924 | http://purl.obolibrary.org/obo/GO_0031639 | denotes | plasminogen activator |
T42 | 1007-1015 | http://purl.obolibrary.org/obo/GO_0070265 | denotes | necrosis |
T43 | 1007-1015 | http://purl.obolibrary.org/obo/GO_0019835 | denotes | necrosis |
T44 | 1007-1015 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | necrosis |
T45 | 1007-1015 | http://purl.obolibrary.org/obo/GO_0001906 | denotes | necrosis |
T46 | 1036-1057 | http://purl.obolibrary.org/obo/GO_0031639 | denotes | plasminogen activator |
T47 | 1074-1095 | http://purl.obolibrary.org/obo/GO_0031639 | denotes | plasminogen activator |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T121 | 0-91 | Sentence | denotes | Summary of potential therapeutic effects of heparin in coronavirus disease 2019 (COVID-19). |
T122 | 92-317 | Sentence | denotes | 1) Heparin’s classic function as an anticoagulant, through its interaction with antithrombin-III (AT3), may prove beneficial because of the high prevalence of coagulopathy and clinically significant thrombosis in the disease. |
T123 | 318-631 | Sentence | denotes | 2) Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) entry into both endothelial and epithelial cells is believed to be dependent on its interaction with cell surface heparan sulfate; thus, heparin (or carefully designed synthetic heparin-like drugs) may inhibit this interaction and block viral entry. |
T124 | 632-721 | Sentence | denotes | 3) Last, heparin has known anti-inflammatory effects that may confer benefit in COVID-19. |
T125 | 722-792 | Sentence | denotes | This illustration was created with BioRender (https://biorender.com/). |
T126 | 793-1113 | Sentence | denotes | ACE2, angiotensin-converting enzyme 2; APC, activated protein C; HS, heparan sulfate; IL, interleukin; PAI-1, plasminogen activator inhibitor 1; TF, tissue factor; TFPI, tissue factor pathway inhibitor; TNF, tumor necrosis factor; tPA, tissue plasminogen activator; uPA, urokinase plasminogen activator, VII, factor VII. |
LitCovid-PD-GlycoEpitope
Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
---|---|---|---|---|---|
T16 | 496-511 | GlycoEpitope | denotes | heparan sulfate | http://www.glycoepitope.jp/epitopes/EP0086 |
T17 | 858-860 | GlycoEpitope | denotes | HS | http://www.glycoepitope.jp/epitopes/EP0086 |
T18 | 862-877 | GlycoEpitope | denotes | heparan sulfate | http://www.glycoepitope.jp/epitopes/EP0086 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T45 | 251-263 | Phenotype | denotes | coagulopathy | http://purl.obolibrary.org/obo/HP_0003256 |
T46 | 1001-1006 | Phenotype | denotes | tumor | http://purl.obolibrary.org/obo/HP_0002664 |