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PMC:7377212 / 4915-13131 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T10 236-241 Body_part denotes Serum http://purl.org/sig/ont/fma/fma63083
T11 853-861 Body_part denotes cavities http://purl.org/sig/ont/fma/fma76576
T12 1912-1917 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T13 2136-2141 Body_part denotes Serum http://purl.org/sig/ont/fma/fma63083
T14 2327-2332 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T15 2561-2566 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T16 2856-2861 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T17 2989-2994 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T18 3205-3209 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T19 3268-3273 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T20 3538-3543 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T21 3754-3759 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T22 3987-3992 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T23 4280-4285 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T24 5112-5115 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T25 5252-5257 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T26 5950-5956 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T27 5957-5970 Body_part denotes left bronchus http://purl.org/sig/ont/fma/fma7396
T28 6471-6479 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T29 6690-6706 Body_part denotes right upper lobe http://purl.org/sig/ont/fma/fma7333
T30 6783-6787 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T31 6814-6820 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T32 7028-7032 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T33 7192-7197 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T34 7748-7752 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T35 7753-7757 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T10 236-241 Body_part denotes Serum http://purl.obolibrary.org/obo/UBERON_0001977
T11 1912-1917 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T12 2136-2141 Body_part denotes Serum http://purl.obolibrary.org/obo/UBERON_0001977
T13 2327-2332 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T14 2561-2566 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T15 2856-2861 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T16 2989-2994 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T17 3205-3209 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T18 3268-3273 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T19 3538-3543 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T20 3754-3759 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T21 3987-3992 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T22 4280-4285 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T23 5252-5257 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T24 5950-5956 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T25 5962-5970 Body_part denotes bronchus http://purl.obolibrary.org/obo/UBERON_0002185
T26 6452-6469 Body_part denotes Pleural effusions http://purl.obolibrary.org/obo/UBERON_0000175
T27 6702-6706 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T28 6783-6787 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T29 6814-6820 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T30 7028-7032 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T31 7192-7197 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T32 7753-7757 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
269 473-485 Species denotes A. fumigatus Tax:746128
270 510-522 Species denotes A. fumigatus Tax:746128
271 670-682 Species denotes A. fumigatus Tax:746128
272 885-897 Species denotes A. fumigatus Tax:746128
273 919-931 Species denotes A. fumigatus Tax:746128
274 1125-1137 Species denotes A. fumigatus Tax:746128
275 1152-1164 Species denotes A. fumigatus Tax:746128
276 1559-1571 Species denotes A. fumigatus Tax:746128
277 1725-1737 Species denotes A. fumigatus Tax:746128
278 1844-1856 Species denotes A. fumigatus Tax:746128
279 1874-1886 Species denotes A. fumigatus Tax:746128
281 6489-6501 Species denotes ion, ground- Tax:746128
282 2888-2900 Species denotes Paris, Franc Tax:746128
283 3165-3177 Species denotes 1 days 6–10 Tax:746128
284 3432-3444 Species denotes –5, 10 mg·da Tax:746128
285 3654-3666 Species denotes y−1 days 1–5 Tax:746128
286 3900-3913 Species denotes ds Typical CO Tax:746128
287 4247-4259 Species denotes e bilateral Tax:746128
288 4537-4549 Species denotes e Died Antwe Tax:746128
289 4667-4679 Species denotes Antwerp, Bel Tax:746128
290 4794-4806 Species denotes erp, Belgium Tax:746128
291 4969-4983 Species denotes ids for pemphi Tax:746128
292 5309-5321 Species denotes AML with IPA Tax:746128
293 5470-5482 Species denotes rdiomyopathy Tax:746128
294 5736-5748 Species denotes ·day−1×2 day Tax:746128
295 5894-5906 Species denotes oderate COPD Tax:746128
296 6192-6204 Species denotes oids NR A. f Tax:746128
297 6313-6325 Species denotes ND A. fumig Tax:746128
298 6756-6768 Species denotes A. fumigatus Tax:746128
299 6825-6836 Species denotes Aspergillus Tax:746128
300 6516-6528 Species denotes , pulmonary Tax:746128
301 3198-3210 Species denotes mental lung Tax:746128
302 3469-3481 Species denotes VID-19”, emp Tax:746128
303 3687-3700 Species denotes 10 Typical CO Tax:746128
304 3928-3940 Species denotes ipheral nodu Tax:746128
305 4079-4086 Chemical denotes d Graz, MESH:D013256
306 5504-5511 Chemical denotes (-) 3 MESH:D013256
307 6968-6975 Chemical denotes steroid MESH:D013256
308 379-383 Disease denotes COPD MESH:D029424
309 553-557 Disease denotes Died MESH:D003643
310 712-716 Disease denotes Died MESH:D003643
311 744-752 Disease denotes Diabetes MESH:D003920
312 1013-1022 Disease denotes emphysema MESH:D004646
313 1031-1035 Disease denotes COPD MESH:D029424
314 1112-1124 Disease denotes emphysema ND MESH:C537849
315 1234-1238 Disease denotes Died MESH:D003643
316 1473-1491 Disease denotes Pulmonary fibrosis MESH:D011658
317 1510-1528 Disease denotes COVID-19 pneumonia MESH:C000657245
318 1622-1626 Disease denotes Died MESH:D003643
319 1676-1694 Disease denotes COVID-19 pneumonia MESH:C000657245
320 1784-1788 Disease denotes Died MESH:D003643
321 1813-1837 Disease denotes Myelodysplastic syndrome MESH:D009190
322 2000-2004 Disease denotes Died MESH:D003643
323 3185-3193 Disease denotes COVID-19 MESH:C000657245
326 6476-6484 Disease denotes lar cond MESH:C000657245
327 2615-2625 Disease denotes if TA con MESH:D003920
328 2689-2697 Disease denotes etes, de MESH:C000657245
329 2813-2817 Disease denotes 5 NR MESH:D003643
330 2878-2886 Disease denotes None Die MESH:C000657245
331 3055-3063 Disease denotes ture (+) MESH:D003920
332 3127-3135 Disease denotes methason MESH:C000657245
333 3411-3419 Disease denotes ne 20 mg MESH:C000657245
334 3422-3431 Disease denotes y−1 days MESH:D004646
335 3539-3543 Disease denotes erum MESH:D003643
336 3570-3580 Disease denotes host fact MESH:D003920
337 3644-3652 Disease denotes e 20 mg· MESH:C000657245
338 3798-3802 Disease denotes Put MESH:D003643
339 3831-3838 Disease denotes ) but B MESH:D009101
340 3864-3872 Disease denotes ance [9] MESH:C000657245
341 4031-4035 Disease denotes only MESH:D003643
342 4073-4077 Disease denotes ne D MESH:D029424
343 4096-4120 Disease denotes 20] 70 M Moderate COPD, MESH:D012893
344 4122-4130 Disease denotes eroid in MESH:D003920
345 4355-4359 Disease denotes or P MESH:D003643
346 4405-4414 Disease denotes L V Died MESH:C537849
347 4490-4494 Disease denotes ive MESH:D003643
348 4655-4663 Disease denotes V, I Al MESH:D003920
349 4746-4750 Disease denotes om b MESH:D003643
350 4782-4790 Disease denotes V Died MESH:D003920
351 4909-4917 Disease denotes ive Antw MESH:D003920
352 5252-5256 Disease denotes seru MESH:D003643
353 5288-5291 Disease denotes rp, MESH:D015470
354 5365-5369 Disease denotes st f MESH:D003643
355 5449-5463 Disease denotes ·day−1×28 days MESH:D009202
356 5614-5618 Disease denotes to MESH:D003643
357 5663-5667 Disease denotes [10 MESH:D029424
358 5681-5686 Disease denotes COPD, MESH:D002289
359 5835-5839 Disease denotes o BA MESH:D003643
360 5886-5890 Disease denotes ] 75 MESH:D029424
361 6011-6015 Disease denotes e V+ MESH:D003643
362 6260-6264 Disease denotes r L- MESH:D003643
363 6452-6469 Disease denotes Pleural effusions MESH:D010996
364 6518-6536 Disease denotes pulmonary cysts ND MESH:C537849
365 6540-6552 Disease denotes flavus ND ND MESH:C537849
366 6625-6629 Disease denotes Died MESH:D003643
367 6653-6661 Disease denotes Diabetes MESH:D003920
368 6864-6868 Disease denotes Died MESH:D003643
371 7028-7040 Disease denotes lung disease MESH:D008171
374 37-71 Disease denotes coronavirus disease 2019 (COVID-19 MESH:C000657245
375 84-107 Disease denotes pulmonary aspergillosis MESH:D055732
415 7994-8001 Species denotes patient Tax:9606
416 8027-8038 Disease denotes neutropenia MESH:D009503
417 8055-8065 Disease denotes malignancy MESH:D009369
424 7371-7403 Disease denotes invasive pulmonary aspergillosis MESH:D055744

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T84 37-61 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T85 63-71 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T86 94-107 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T87 218-220 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T88 379-383 Disease denotes COPD http://purl.obolibrary.org/obo/MONDO_0005002
T89 744-752 Disease denotes Diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T90 1013-1022 Disease denotes emphysema http://purl.obolibrary.org/obo/MONDO_0004849
T91 1031-1035 Disease denotes COPD http://purl.obolibrary.org/obo/MONDO_0005002
T92 1112-1121 Disease denotes emphysema http://purl.obolibrary.org/obo/MONDO_0004849
T93 1145-1147 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T94 1200-1202 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T95 1398-1400 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T96 1473-1491 Disease denotes Pulmonary fibrosis http://purl.obolibrary.org/obo/MONDO_0002771
T97 1510-1518 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T98 1519-1528 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T99 1676-1684 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T100 1685-1694 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T101 1813-1837 Disease denotes Myelodysplastic syndrome http://purl.obolibrary.org/obo/MONDO_0018881|http://purl.obolibrary.org/obo/MONDO_0044873
T103 1867-1869 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T104 1891-1893 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T105 1963-1965 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T106 2094-2102 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T107 2264-2272 Disease denotes Diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T108 2281-2289 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T109 2508-2516 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T110 2540-2542 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T111 2619-2621 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T112 2685-2693 Disease denotes Diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T113 2761-2769 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T114 2911-2917 Disease denotes Asthma http://purl.obolibrary.org/obo/MONDO_0004979
T115 2943-2951 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T116 3113-3121 Disease denotes Diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T117 3185-3193 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T118 3392-3398 Disease denotes Asthma http://purl.obolibrary.org/obo/MONDO_0004979
T119 3467-3475 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T120 3478-3487 Disease denotes emphysema http://purl.obolibrary.org/obo/MONDO_0004849
T121 3622-3630 Disease denotes Diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T122 3698-3706 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T123 3878-3885 Disease denotes Myeloma http://purl.obolibrary.org/obo/MONDO_0005170|http://purl.obolibrary.org/obo/MONDO_0009693
T125 3911-3919 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T126 3966-3968 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T127 4039-4041 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T128 4114-4118 Disease denotes COPD http://purl.obolibrary.org/obo/MONDO_0005002
T129 4163-4171 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T130 4321-4323 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T131 4375-4377 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T132 4502-4504 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T133 4693-4701 Disease denotes Diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T134 4816-4824 Disease denotes Diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T135 4939-4947 Disease denotes Diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T136 4977-4986 Disease denotes pemphigus http://purl.obolibrary.org/obo/MONDO_0006594
T137 5309-5312 Disease denotes AML http://purl.obolibrary.org/obo/MONDO_0018874
T138 5468-5482 Disease denotes cardiomyopathy http://purl.obolibrary.org/obo/MONDO_0004994
T139 5590-5592 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T140 5681-5685 Disease denotes COPD http://purl.obolibrary.org/obo/MONDO_0005002
T141 5699-5704 Disease denotes NSCLC http://purl.obolibrary.org/obo/MONDO_0005233
T142 5809-5811 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T143 5902-5906 Disease denotes COPD http://purl.obolibrary.org/obo/MONDO_0005002
T144 6172-6178 Disease denotes Asthma http://purl.obolibrary.org/obo/MONDO_0004979
T145 6371-6373 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T146 6588-6590 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T147 6653-6661 Disease denotes Diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T148 6998-7006 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T149 7028-7040 Disease denotes lung disease http://purl.obolibrary.org/obo/MONDO_0005275
T150 7390-7403 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T151 7434-7436 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991
T152 7535-7541 Disease denotes Cancer http://purl.obolibrary.org/obo/MONDO_0004992
T153 7684-7687 Disease denotes AML http://purl.obolibrary.org/obo/MONDO_0018874
T154 7732-7737 Disease denotes NSCLC http://purl.obolibrary.org/obo/MONDO_0005233
T155 7739-7764 Disease denotes nonsmall-cell lung cancer http://purl.obolibrary.org/obo/MONDO_0005233
T156 7753-7764 Disease denotes lung cancer http://purl.obolibrary.org/obo/MONDO_0008903
T157 7758-7764 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T158 8027-8038 Disease denotes neutropenia http://purl.obolibrary.org/obo/MONDO_0001475

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T38 350-352 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T39 473-474 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T40 510-511 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T41 576-578 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T42 670-671 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T43 735-737 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T44 853-861 http://purl.obolibrary.org/obo/UBERON_0002553 denotes cavities
T45 885-886 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T46 919-920 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T47 988-990 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T48 1125-1126 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T49 1152-1153 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T50 1257-1259 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T51 1464-1466 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T52 1559-1560 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T53 1616-1621 http://purl.obolibrary.org/obo/NCBITaxon_9940 denotes L-AmB
T54 1644-1646 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T55 1725-1726 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T56 1778-1783 http://purl.obolibrary.org/obo/NCBITaxon_9940 denotes L-AmB
T57 1844-1845 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T58 1874-1875 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T59 2290-2291 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T60 2520-2521 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T61 2547-2548 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T62 2903-2908 http://purl.obolibrary.org/obo/CLO_0001533 denotes 9] 43
T63 2952-2953 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T64 3205-3209 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T65 3205-3209 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T66 3222-3223 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T67 3254-3255 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T68 3488-3489 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T69 3524-3525 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T70 3707-3708 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T71 3740-3741 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T72 3946-3947 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T73 3973-3974 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T74 4280-4285 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T75 4301-4302 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T76 4451-4452 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T77 4579-4580 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T78 4685-4690 http://purl.obolibrary.org/obo/CLO_0050053 denotes 8] 62
T79 4705-4706 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T80 4828-4829 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T81 5001-5002 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T82 5117-5120 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T83 5301-5306 http://purl.obolibrary.org/obo/CLO_0050040 denotes 8] 75
T84 5330-5331 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T85 5489-5490 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T86 5502-5510 http://purl.obolibrary.org/obo/CLO_0008143 denotes ND (-) 3
T87 5624-5625 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T88 5630-5635 http://purl.obolibrary.org/obo/NCBITaxon_9940 denotes L-AmB
T89 5756-5757 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T90 5772-5776 http://purl.obolibrary.org/obo/CLO_0008143 denotes ND 3
T91 5843-5844 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T92 5849-5854 http://purl.obolibrary.org/obo/NCBITaxon_9940 denotes L-AmB
T93 5910-5911 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T94 5962-5970 http://purl.obolibrary.org/obo/UBERON_0002185 denotes bronchus
T95 6015-6016 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T96 6021-6026 http://purl.obolibrary.org/obo/NCBITaxon_9940 denotes L-AmB
T97 6121-6122 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T98 6127-6132 http://purl.obolibrary.org/obo/NCBITaxon_9940 denotes L-AmB
T99 6200-6201 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T100 6256-6257 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T101 6262-6267 http://purl.obolibrary.org/obo/NCBITaxon_9940 denotes L-AmB
T102 6317-6318 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T103 6405-6406 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T104 6411-6416 http://purl.obolibrary.org/obo/NCBITaxon_9940 denotes L-AmB
T105 6452-6469 http://purl.obolibrary.org/obo/UBERON_0000175 denotes Pleural effusions
T106 6537-6538 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T107 6644-6646 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T108 6756-6757 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T109 6783-6787 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T110 6783-6787 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T111 6858-6863 http://purl.obolibrary.org/obo/NCBITaxon_9940 denotes L-AmB
T112 6992-6994 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T113 7028-7032 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T114 7028-7032 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T115 7047-7049 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T116 7074-7080 http://purl.obolibrary.org/obo/UBERON_0002553 denotes cavity
T117 7122-7124 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T118 7271-7273 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T119 7299-7301 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T120 7492-7504 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T121 7589-7593 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T122 7589-7593 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T123 7598-7604 http://purl.obolibrary.org/obo/UBERON_0003100 denotes female
T124 7659-7665 http://purl.obolibrary.org/obo/OBI_0000968 denotes device
T125 7748-7752 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T126 7753-7757 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T127 7753-7757 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T128 7819-7824 http://purl.obolibrary.org/obo/NCBITaxon_9940 denotes L-AmB
T129 7849-7850 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T130 7868-7869 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T131 7992-7993 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T132 8195-8196 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T6 179-182 Chemical denotes IPA http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802
T8 206-209 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T9 218-220 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T10 229-232 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T11 233-235 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T13 242-244 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T15 393-401 Chemical denotes steroids http://purl.obolibrary.org/obo/CHEBI_35341
T16 486-488 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T17 502-505 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T18 523-525 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T19 642-644 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T20 662-665 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T21 683-685 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T22 911-914 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T23 932-934 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T24 1045-1053 Chemical denotes steroids http://purl.obolibrary.org/obo/CHEBI_35341
T25 1122-1124 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T26 1138-1140 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T27 1145-1147 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T28 1165-1167 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T29 1200-1202 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T30 1228-1231 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T31 1375-1377 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T32 1382-1384 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T33 1398-1400 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T34 1409-1411 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T35 1555-1558 Chemical denotes IPA http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802
T37 1572-1574 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T38 1721-1724 Chemical denotes IPA http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802
T40 1738-1740 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T41 1838-1840 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T42 1841-1843 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T43 1857-1859 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T44 1867-1869 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T45 1891-1893 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T46 1894-1896 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T48 1963-1965 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T49 1991-1994 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T50 2028-2041 Chemical denotes Dexamethasone http://purl.obolibrary.org/obo/CHEBI_41879
T51 2107-2109 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T52 2123-2126 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T53 2164-2166 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T54 2199-2202 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T55 2203-2205 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T57 2303-2305 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T58 2314-2317 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T59 2341-2343 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T60 2377-2380 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T61 2397-2400 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T62 2401-2403 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T64 2442-2455 Chemical denotes Dexamethasone http://purl.obolibrary.org/obo/CHEBI_41879
T65 2517-2519 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T66 2533-2535 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T67 2540-2542 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T68 2584-2586 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T69 2619-2621 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T70 2647-2650 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T71 2695-2708 Chemical denotes dexamethasone http://purl.obolibrary.org/obo/CHEBI_41879
T72 2774-2776 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T73 2790-2793 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T74 2815-2817 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T75 2862-2864 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T77 2919-2934 Chemical denotes corticosteroids http://purl.obolibrary.org/obo/CHEBI_50858
T78 2965-2967 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T79 2976-2979 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T80 3012-3014 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T81 3048-3051 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T82 3068-3071 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T83 3072-3074 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T85 3123-3136 Chemical denotes Dexamethasone http://purl.obolibrary.org/obo/CHEBI_41879
T86 3235-3237 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T87 3246-3249 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T88 3291-3293 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T89 3327-3330 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T90 3347-3350 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T91 3351-3353 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T93 3400-3413 Chemical denotes dexamethasone http://purl.obolibrary.org/obo/CHEBI_41879
T94 3501-3503 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T95 3516-3519 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T96 3565-3567 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T97 3632-3645 Chemical denotes dexamethasone http://purl.obolibrary.org/obo/CHEBI_41879
T98 3720-3722 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T99 3731-3734 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T100 3781-3783 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T101 3817-3820 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T102 3837-3840 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T103 3841-3843 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T105 3887-3902 Chemical denotes corticosteroids http://purl.obolibrary.org/obo/CHEBI_50858
T106 3943-3945 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T107 3959-3961 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T108 3966-3968 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T109 4010-4012 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T110 4039-4041 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T111 4067-4070 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T112 4120-4127 Chemical denotes steroid http://purl.obolibrary.org/obo/CHEBI_35341
T113 4298-4300 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T114 4314-4316 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T115 4321-4323 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T116 4324-4327 Chemical denotes LFD http://purl.obolibrary.org/obo/CHEBI_73571
T117 4375-4377 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T118 4403-4406 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T119 4445-4447 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T120 4448-4450 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T121 4461-4463 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T122 4502-4504 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T123 4530-4533 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T124 4592-4594 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T125 4702-4704 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T126 4718-4720 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T127 4825-4827 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T128 4841-4843 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T129 4957-4972 Chemical denotes corticosteroids http://purl.obolibrary.org/obo/CHEBI_50858
T130 4998-5000 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T131 5014-5016 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T132 5157-5159 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T133 5164-5166 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T134 5258-5260 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T136 5318-5321 Chemical denotes IPA http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802
T138 5327-5329 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T139 5343-5345 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T140 5355-5357 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T141 5483-5485 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T142 5486-5488 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T143 5502-5504 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T144 5523-5530 Chemical denotes steroid http://purl.obolibrary.org/obo/CHEBI_35341
T145 5590-5592 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T146 5618-5621 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T147 5711-5723 Chemical denotes prednisolone http://purl.obolibrary.org/obo/CHEBI_8378
T148 5750-5752 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T149 5753-5755 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T150 5769-5771 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T151 5772-5774 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T152 5809-5811 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T153 5837-5840 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T154 5907-5909 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T155 5923-5925 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T156 5934-5936 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T157 6070-6072 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T158 6077-6079 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T159 6188-6196 Chemical denotes steroids http://purl.obolibrary.org/obo/CHEBI_35341
T160 6197-6199 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T161 6213-6215 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T162 6311-6313 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T163 6314-6316 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T164 6330-6332 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T165 6333-6335 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T166 6371-6373 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T167 6399-6402 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T168 6534-6536 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T169 6547-6549 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T170 6550-6552 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T171 6553-6555 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T172 6588-6590 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T173 6616-6619 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T174 6769-6771 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T175 6772-6774 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T176 6803-6805 Chemical denotes PM http://purl.obolibrary.org/obo/CHEBI_141444|http://purl.obolibrary.org/obo/CHEBI_16410|http://purl.obolibrary.org/obo/CHEBI_53551
T179 6811-6813 Chemical denotes PM http://purl.obolibrary.org/obo/CHEBI_141444|http://purl.obolibrary.org/obo/CHEBI_16410|http://purl.obolibrary.org/obo/CHEBI_53551
T182 6968-6975 Chemical denotes steroid http://purl.obolibrary.org/obo/CHEBI_35341
T183 7130-7133 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T184 7160-7163 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T185 7164-7166 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T187 7198-7200 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T189 7366-7369 Chemical denotes IPA http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802
T191 7405-7408 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T192 7434-7436 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824
T193 7457-7459 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T195 7461-7474 Chemical denotes galactomannan http://purl.obolibrary.org/obo/CHEBI_27680
T196 7581-7584 Chemical denotes IPA http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802
T198 7589-7593 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780
T199 7621-7627 Chemical denotes glucan http://purl.obolibrary.org/obo/CHEBI_37163
T200 7629-7632 Chemical denotes LFD http://purl.obolibrary.org/obo/CHEBI_73571
T201 7667-7669 Chemical denotes PM http://purl.obolibrary.org/obo/CHEBI_141444|http://purl.obolibrary.org/obo/CHEBI_16410|http://purl.obolibrary.org/obo/CHEBI_53551
T204 7766-7768 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T205 7787-7799 Chemical denotes voriconazole http://purl.obolibrary.org/obo/CHEBI_10023
T206 7804-7817 Chemical denotes isavuconazole http://purl.obolibrary.org/obo/CHEBI_85979
T207 7836-7850 Chemical denotes amphotericin B http://purl.obolibrary.org/obo/CHEBI_2682
T208 7855-7866 Chemical denotes caspofungin http://purl.obolibrary.org/obo/CHEBI_474180
T209 7871-7884 Chemical denotes anidulafungin http://purl.obolibrary.org/obo/CHEBI_55346
T210 7886-7888 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T211 7988-7991 Chemical denotes IPA http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802
T213 8121-8136 Chemical denotes corticosteroids http://purl.obolibrary.org/obo/CHEBI_50858

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 4149-4154 http://purl.obolibrary.org/obo/GO_0030431 denotes sleep

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T1 233-235 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T2 242-244 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T3 1894-1896 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T4 2203-2205 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T5 2401-2403 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T6 2862-2864 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T7 3072-3074 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T8 3351-3353 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T9 3841-3843 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T10 5258-5260 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T11 7164-7166 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T12 7198-7200 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T13 7457-7459 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T14 7461-7474 GlycoEpitope denotes galactomannan http://www.glycoepitope.jp/epitopes/EP0510

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T28 0-148 Sentence denotes TABLE 1 Summary of reported cases of coronavirus disease 2019 (COVID-19) associated pulmonary aspergillosis in the intensive care unit (ICU) setting
T29 149-331 Sentence denotes Location [ref.] Age years Sex IPA risk factors Radiology BAL culture TA culture BAL GM Serum GM Other diagnostics Onset days post-ICU EORTC status Mod AspICU status Treatment Outcome
T30 332-557 Sentence denotes Cologne, Germany [11] 62 F Ex-smoker, moderate COPD, inhaled steroids Ground-glass opacities, crazy paving, peripheral nodular consolidation A. fumigatus NR (+) >2.5 (-) BAL PCR A. fumigatus NR No host factor# Putative V Died
T31 558-716 Sentence denotes Cologne, Germany [11] 70 M Ex-smoker Ground-glass opacities, occasional nodules (-) NR (+) >2.5 (+) 0.7 BAL PCR A. fumigatus NR No host factor Putative I Died
T32 717-969 Sentence denotes Cologne, Germany [11] 54 M Diabetes, systemic corticosteroids0.4 mg·kg−1·day−1×13 days Ground-glass opacities, nodular infiltrates with cavities, air crescent sign (-) A. fumigatus (+) >2.5 (-) BAL PCR A. fumigatus NR No host factor Putative C, V Alive
T33 970-1238 Sentence denotes Cologne, Germany [11] 73 M Smoker, bullous emphysema, severe COPD, inhaled steroids Ground-glass opacities, occasional nodules, known bullous emphysema ND A. fumigatus ND (-) TA PCR A. fumigatus NR No host factor Putative only if TA considered equivalent to BAL V Died
T34 1239-1446 Sentence denotes Cologne, Germany [11] 54 F None Ground-glass opacities, crazy paving, central and peripheral consolidation, smaller nodular infiltrates ND (-) ND (+) 2.7, 1.3 TA PCR (-) NR No host factor Putative C, V Alive
T35 1447-1626 Sentence denotes Munich, Germany [18] 80 M Pulmonary fibrosis Typical signs for COVID-19 pneumonia but no specific signs for IPA A. fumigatus NR (+) >6 (+) 1.5 5 No host factor Putative L-AmB Died
T36 1627-1788 Sentence denotes Munich, Germany [18] 70 M None Typical signs for COVID-19 pneumonia but no specific signs for IPA A. fumigatus NR (+) >6 (-) 6 No host factor Putative L-AmB Died
T37 1789-2004 Sentence denotes Paris, France [19] 74 M Myelodysplastic syndrome NR ND A. fumigatus ND (-) x2 TA PCR A. fumigatus x2, TA GM (-)×1, BDG and serum PCR (-) x2 4 No host factor Putative only if TA considered equivalent to BAL None Died
T38 2005-2240 Sentence denotes Paris, France [9] 53 M Dexamethasone 20 mg·day−1 days 1–5, 10 mg·day−1 days 6–10 Typical COVID-19 (-) NR (-) 0.89 (-) BAL PCR (-), Serum PCR (-), BDG (+) >500 NR No host factor Putative only if BAL GM cut-off lowered to >0.8 None Alive
T39 2241-2418 Sentence denotes Paris, France [9] 59 F Diabetes Typical COVID-19 A. fumigatus NR (-) (-) BAL PCR (-), serum PCR (-) NR No host factor Putative but note BAL culture (+) but BAL GM (-) None Alive
T40 2419-2661 Sentence denotes Paris, France [9] 69 F Dexamethasone 20 mg·day−1 days 1–5, 10 mg·day−1 days 6–10 Typical COVID-19 ND A. fumigatus ND (-) TA PCR A. fumigatus, serum PCR (-), BDG (-) NR No host factor Putative only if TA considered equivalent to BAL None Alive
T41 2662-2887 Sentence denotes Paris, France [9] 63 F Diabetes, dexamethasone 20 mg·day−1 days 1–5, 10 mg·day−1 days 6–10 Typical COVID-19 (-) NR (-) (+) 0.51 BAL PCR (-), BDG (+) 105 NR No host factor Putative but relies on serum GM of only 0.51 None Died
T42 2888-3089 Sentence denotes Paris, France [9] 43 M Asthma, corticosteroids Typical COVID-19 A. fumigatus NR (-) (-) BAL PCR (-), serum PCR (-), BDG (-) NR No host factor Putative but note BAL culture (+) but BAL GM (-) None Alive
T43 3090-3368 Sentence denotes Paris, France [9] 79 M Diabetes, Dexamethasone 20 mg·d−1 days 1–5, 10 mg·d−1 days 6–10 Typical COVID-19, segmental lung atelectasis A. fumigatus NR (-) (-) BAL PCR A. fumigatus, serum PCR (-), BDG (-) NR No host factor Putative but note BAL culture (+) but BAL GM (-) None Alive
T44 3369-3598 Sentence denotes Paris, France [9] 77 M Asthma, dexamethasone 20 mg·day−1 days 1–5, 10 mg·day−1 days 6–10 “Typical COVID-19”, emphysema A. fumigatus NR (+) 3.9 (-) BAL PCR A. fumigatus, serum PCR (-), BDG (+) 135 NR No host factor Putative V Died
T45 3599-3854 Sentence denotes Paris, France [9] 75 F Diabetes, dexamethasone 20 mg·day−1 days 1–5, 10 mg·day−1 days 6–10 Typical COVID-19 A. fumigatus NR (-) (-) BAL PCR, A. fumigatus, serum PCR (-), BDG (+) 450 NR No host factor Putative but note BAL culture (+) but BAL GM (-) C Died
T46 3855-4080 Sentence denotes Paris, France [9] 47 M Myeloma, corticosteroids Typical COVID-19, one peripheral nodule ND A. fumigatus ND (-) TA PCR A. fumigatus, serum PCR (-), BDG (-) NR Probable Putative only if TA considered equivalent to BAL None Died
T47 4081-4413 Sentence denotes Graz, Austria [20] 70 M Moderate COPD, steroid inhaler, obstructive sleep apnoea, diabetes Ground-glass opacities, crazy paving, reversed halo sign, progression of the bilateral infiltrates on day 2 chest radiography ND A. fumigatus ND (-) TA LFD (+), BDG (-) 3 No host factor Putative only if TA considered equivalent to BAL V Died
T48 4414-4543 Sentence denotes Antwerp, Belgium [8] 86 M None ND ND A. flavus ND (-) 9 No host factor Putative only if TA considered equivalent to BAL None Died
T49 4544-4666 Sentence denotes Antwerp, Belgium [8] 38 M None (+) A. fumigatus NR (+) >2.8 (-) Histology from bronchoscopy (+) 6 Proven Proven V, I Alive
T50 4667-4789 Sentence denotes Antwerp, Belgium [8] 62 M Diabetes ND A. fumigatus NR (+) >2.0 (-) Histology from bronchoscopy (+) 16 Proven Proven V Died
T51 4790-4912 Sentence denotes Antwerp, Belgium [8] 73 M Diabetes ND A. fumigatus NR (+) >2.8 (-) Histology from bronchoscopy (+) 5 Proven Proven V Alive
T52 4913-5085 Sentence denotes Antwerp, Belgium [8] 77 M Diabetes, chronic corticosteroids for pemphigus foliaceous ND A. fumigatus NR (+) 2.79 (-) Histology from bronchoscopy (+) 2 Proven Proven V Alive
T53 5086-5282 Sentence denotes Antwerp, Belgium [8] 55 M HIV (CD4 count >250, viral load <20) copies) ND (-) NR (-) (+) 0.8 Histology from bronchoscopy (-) 13 No host factor Putative but relies on serum GM of only 0.8 V, I Died
T54 5283-5390 Sentence denotes Antwerp, Belgium [8] 75 M AML with IPA 2012 ND A. fumigatus NR (+) 2.63 ND 8 No host factor Putative V Died
T55 5391-5640 Sentence denotes Breda, The Netherlands [10] 83 M Prednisolone 0.13 mg·kg−1·day−1×28 days for cardiomyopathy NR ND A. fumigatus ND (-) 3 Probable if steroid requirement reduced to <0.3 mg·kg−1·day−1 Putative only if TA considered equivalent to BAL V+A, or L-AmB Died
T56 5641-5859 Sentence denotes Breda, The Netherlands [10] 67 M Severe COPD, Post RT for NSCLC 2014, prednisolone 0.37 mg·kg−1·day−1×2 days NR ND A. fumigatus ND ND 3 No host factor Putative only if TA considered equivalent to BAL V+A, or L-AmB Died
T57 5860-6031 Sentence denotes Breda, The Netherlands [10] 75 M Moderate COPD NR A. fumigatus NR (+) 4.0 ND Mucoid white sputum left bronchus at bronchoscopy 5 No host factor Putative V+A, or L-AmB Died
T58 6032-6138 Sentence denotes Breda, The Netherlands [10] 43 M None NR (-) NR (+) 3.8 (-) 14 No host factor Putative V+A, or L-AmB Alive
T59 6139-6272 Sentence denotes Breda, The Netherlands [10] 57 M Asthma, inhaled steroids NR A. fumigatus NR (+) 1.6 (-) 5 No host factor Putative V+A, or L-AmB Died
T60 6273-6422 Sentence denotes Breda, The Netherlands [10] 58 M None NR ND A. fumigatus ND ND 28 No host factor Putative only if TA considered equivalent to BAL V+A, or L-AmB Alive
T61 6423-6629 Sentence denotes Paris, France [21] 80 M None Pleural effusions, alveolar condensation, ground-glass opacities, pulmonary cysts ND A. flavus ND ND NR No host factor Putative only if TA considered equivalent to BAL V, I Died
T62 6630-6841 Sentence denotes Milan, Italy [22] 73 M Diabetes Interstitial opacities with right upper lobe focal consolidation which progressively worsened A. fumigatus NR ND (+) 8.6 Lung histology from PM (+), PM tissue PCR Aspergillus spp.
T63 6842-6868 Sentence denotes 9 Proven Proven L-AmB Died
T64 6869-6902 Sentence denotes Summary Median (IQR)70 (57–75) M:
T65 6903-7365 Sentence denotes 26 (79%) out of 33 EORTC host factor: n=2 (6%); inhaled/systemic steroid exposure: n=16 (48%); diabetes: n=10 (30%); chronic lung disease: n=9 (27%) Nodules: n=6 (31.6%), cavity/halo-sign: n=2 (10.5%) 16 (72.7%) out of 22 with BAL 14 (66.7%) out of 21 with BAL GM 6 (21.4%) out of 28 with serum GM Median (IQR)5.5 (4.3–9) Proven: n=5; probable: n=1; no host factor: n=27 Proven: n=5; putative: n=11; putative with caveats: n=17 24 (72.7%) treated 21 (63.6%) died
T66 7366-7482 Sentence denotes IPA: invasive pulmonary aspergillosis; BAL: bronchoalveolar lavage; TA: tracheal aspirate; GM: galactomannan; EORTC:
T67 7483-7633 Sentence denotes European Organization for Research and Treatment of Cancer; AspICU: clinical criteria to diagnose IPA; M: male; F: female; BDG: (1–3)-β-D-glucan; LFD:

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T15 379-383 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T16 863-880 Phenotype denotes air crescent sign http://purl.obolibrary.org/obo/HP_0032172
T17 1013-1022 Phenotype denotes emphysema http://purl.obolibrary.org/obo/HP_0002097
T18 1031-1035 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T19 1112-1121 Phenotype denotes emphysema http://purl.obolibrary.org/obo/HP_0002097
T20 1473-1491 Phenotype denotes Pulmonary fibrosis http://purl.obolibrary.org/obo/HP_0002206
T21 1519-1528 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T22 1685-1694 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T23 1813-1837 Phenotype denotes Myelodysplastic syndrome http://purl.obolibrary.org/obo/HP_0002863
T24 2911-2917 Phenotype denotes Asthma http://purl.obolibrary.org/obo/HP_0002099
T25 3210-3221 Phenotype denotes atelectasis http://purl.obolibrary.org/obo/HP_0100750
T26 3392-3398 Phenotype denotes Asthma http://purl.obolibrary.org/obo/HP_0002099
T27 3478-3487 Phenotype denotes emphysema http://purl.obolibrary.org/obo/HP_0002097
T28 4114-4118 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T29 4137-4161 Phenotype denotes obstructive sleep apnoea http://purl.obolibrary.org/obo/HP_0002870
T30 4210-4228 Phenotype denotes reversed halo sign http://purl.obolibrary.org/obo/HP_0032983
T31 5309-5312 Phenotype denotes AML http://purl.obolibrary.org/obo/HP_0004808
T32 5468-5482 Phenotype denotes cardiomyopathy http://purl.obolibrary.org/obo/HP_0001638
T33 5681-5685 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T34 5699-5704 Phenotype denotes NSCLC http://purl.obolibrary.org/obo/HP_0030358
T35 5902-5906 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T36 6172-6178 Phenotype denotes Asthma http://purl.obolibrary.org/obo/HP_0002099
T37 6452-6469 Phenotype denotes Pleural effusions http://purl.obolibrary.org/obo/HP_0002202
T38 6518-6533 Phenotype denotes pulmonary cysts http://purl.obolibrary.org/obo/HP_0032445
T39 7020-7040 Phenotype denotes chronic lung disease http://purl.obolibrary.org/obo/HP_0006528
T40 7371-7403 Phenotype denotes invasive pulmonary aspergillosis http://purl.obolibrary.org/obo/HP_0020103
T41 7535-7541 Phenotype denotes Cancer http://purl.obolibrary.org/obo/HP_0002664
T42 7684-7687 Phenotype denotes AML http://purl.obolibrary.org/obo/HP_0004808
T43 7689-7712 Phenotype denotes acute myeloid leukaemia http://purl.obolibrary.org/obo/HP_0004808
T44 7732-7737 Phenotype denotes NSCLC http://purl.obolibrary.org/obo/HP_0030358
T45 7753-7764 Phenotype denotes lung cancer http://purl.obolibrary.org/obo/HP_0100526
T46 8027-8038 Phenotype denotes neutropenia http://purl.obolibrary.org/obo/HP_0001875