PMC:7377212 / 20003-20423 JSONTXT

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T51","span":{"begin":84,"end":93},"obj":"UBERON:0002048"},{"id":"T54","span":{"begin":123,"end":125},"obj":"UBERON:0002048"},{"id":"T56","span":{"begin":132,"end":133},"obj":"SP_7"},{"id":"T66","span":{"begin":182,"end":183},"obj":"GO:0018995"},{"id":"T69","span":{"begin":191,"end":192},"obj":"UBERON:0002048"},{"id":"T70","span":{"begin":195,"end":198},"obj":"UBERON:0002048"},{"id":"T74","span":{"begin":214,"end":215},"obj":"GO:0016265"},{"id":"T84","span":{"begin":280,"end":281},"obj":"CHEBI:10023;CHEBI:10023"},{"id":"T94","span":{"begin":358,"end":359},"obj":"SP_7"},{"id":"T97","span":{"begin":372,"end":373},"obj":"SP_7"},{"id":"T99","span":{"begin":379,"end":380},"obj":"SP_7"},{"id":"T100","span":{"begin":380,"end":383},"obj":"UBERON:0002048"},{"id":"T102","span":{"begin":392,"end":393},"obj":"UBERON:0002048"},{"id":"T52","span":{"begin":84,"end":93},"obj":"UBERON:0002048"},{"id":"T155","span":{"begin":33,"end":41},"obj":"SP_7"},{"id":"T156","span":{"begin":132,"end":146},"obj":"CHEBI:50858;CHEBI:50858"},{"id":"T157","span":{"begin":221,"end":229},"obj":"SP_7"},{"id":"T158","span":{"begin":241,"end":250},"obj":"UBERON:0002048"},{"id":"T159","span":{"begin":285,"end":300},"obj":"UBERON:0002186"},{"id":"T160","span":{"begin":336,"end":344},"obj":"UBERON:0003126"},{"id":"T161","span":{"begin":366,"end":373},"obj":"CHEBI:59132;CHEBI:59132"},{"id":"T162","span":{"begin":409,"end":416},"obj":"CHEBI:59132;CHEBI:59132"}],"text":"Proposed screening and diagnostic algorithm for coronavirus disease-2019 associated pulmonary aspergillosis (CAPA). BAL: bronchoalveolar lavage; BDG: (1–3)-β-D-glucan; TA: tracheal aspirate; Asp Ag: aspergillus antigen; AF: antifungal; IA: invasive aspergillosis; GM: galactomannan; EORTC: European Organization for Research and Treatment of Cancer; NBL: non-directed bronchoalveolar lavage; PCP: Pneumocystis pneumonia."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T50","span":{"begin":195,"end":197},"obj":"Body_part"}],"attributes":[{"id":"A50","pred":"fma_id","subj":"T50","obj":"http://purl.org/sig/ont/fma/fma61898"}],"text":"Proposed screening and diagnostic algorithm for coronavirus disease-2019 associated pulmonary aspergillosis (CAPA). BAL: bronchoalveolar lavage; BDG: (1–3)-β-D-glucan; TA: tracheal aspirate; Asp Ag: aspergillus antigen; AF: antifungal; IA: invasive aspergillosis; GM: galactomannan; EORTC: European Organization for Research and Treatment of Cancer; NBL: non-directed bronchoalveolar lavage; PCP: Pneumocystis pneumonia."}

{"project":"LitCovid-PubTator","denotations":[{"id":"125","span":{"begin":84,"end":107},"obj":"Disease"},{"id":"407","span":{"begin":240,"end":262},"obj":"Disease"},{"id":"411","span":{"begin":342,"end":348},"obj":"Disease"},{"id":"431","span":{"begin":48,"end":67},"obj":"Disease"},{"id":"581","span":{"begin":191,"end":210},"obj":"Species"},{"id":"582","span":{"begin":145,"end":166},"obj":"Chemical"}],"attributes":[{"id":"A125","pred":"tao:has_database_id","subj":"125","obj":"MESH:D055732"},{"id":"A407","pred":"tao:has_database_id","subj":"407","obj":"MESH:D055744"},{"id":"A411","pred":"tao:has_database_id","subj":"411","obj":"MESH:D009369"},{"id":"A431","pred":"tao:has_database_id","subj":"431","obj":"MESH:D018352"},{"id":"A581","pred":"tao:has_database_id","subj":"581","obj":"Tax:746128"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Proposed screening and diagnostic algorithm for coronavirus disease-2019 associated pulmonary aspergillosis (CAPA). BAL: bronchoalveolar lavage; BDG: (1–3)-β-D-glucan; TA: tracheal aspirate; Asp Ag: aspergillus antigen; AF: antifungal; IA: invasive aspergillosis; GM: galactomannan; EORTC: European Organization for Research and Treatment of Cancer; NBL: non-directed bronchoalveolar lavage; PCP: Pneumocystis pneumonia."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T202","span":{"begin":48,"end":72},"obj":"Disease"},{"id":"T203","span":{"begin":94,"end":107},"obj":"Disease"},{"id":"T204","span":{"begin":109,"end":113},"obj":"Disease"},{"id":"T205","span":{"begin":168,"end":170},"obj":"Disease"},{"id":"T206","span":{"begin":240,"end":262},"obj":"Disease"},{"id":"T207","span":{"begin":249,"end":262},"obj":"Disease"},{"id":"T208","span":{"begin":342,"end":348},"obj":"Disease"},{"id":"T209","span":{"begin":392,"end":395},"obj":"Disease"},{"id":"T210","span":{"begin":397,"end":409},"obj":"Disease"}],"attributes":[{"id":"A202","pred":"mondo_id","subj":"T202","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A203","pred":"mondo_id","subj":"T203","obj":"http://purl.obolibrary.org/obo/MONDO_0005657"},{"id":"A204","pred":"mondo_id","subj":"T204","obj":"http://purl.obolibrary.org/obo/MONDO_0007163"},{"id":"A205","pred":"mondo_id","subj":"T205","obj":"http://purl.obolibrary.org/obo/MONDO_0017991"},{"id":"A206","pred":"mondo_id","subj":"T206","obj":"http://purl.obolibrary.org/obo/MONDO_0000240"},{"id":"A207","pred":"mondo_id","subj":"T207","obj":"http://purl.obolibrary.org/obo/MONDO_0005657"},{"id":"A208","pred":"mondo_id","subj":"T208","obj":"http://purl.obolibrary.org/obo/MONDO_0004992"},{"id":"A209","pred":"mondo_id","subj":"T209","obj":"http://purl.obolibrary.org/obo/MONDO_0019121"},{"id":"A210","pred":"mondo_id","subj":"T210","obj":"http://purl.obolibrary.org/obo/MONDO_0019121"}],"text":"Proposed screening and diagnostic algorithm for coronavirus disease-2019 associated pulmonary aspergillosis (CAPA). BAL: bronchoalveolar lavage; BDG: (1–3)-β-D-glucan; TA: tracheal aspirate; Asp Ag: aspergillus antigen; AF: antifungal; IA: invasive aspergillosis; GM: galactomannan; EORTC: European Organization for Research and Treatment of Cancer; NBL: non-directed bronchoalveolar lavage; PCP: Pneumocystis pneumonia."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T176","span":{"begin":299,"end":311},"obj":"http://purl.obolibrary.org/obo/OBI_0000245"}],"text":"Proposed screening and diagnostic algorithm for coronavirus disease-2019 associated pulmonary aspergillosis (CAPA). BAL: bronchoalveolar lavage; BDG: (1–3)-β-D-glucan; TA: tracheal aspirate; Asp Ag: aspergillus antigen; AF: antifungal; IA: invasive aspergillosis; GM: galactomannan; EORTC: European Organization for Research and Treatment of Cancer; NBL: non-directed bronchoalveolar lavage; PCP: Pneumocystis pneumonia."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T286","span":{"begin":116,"end":119},"obj":"Chemical"},{"id":"T287","span":{"begin":160,"end":166},"obj":"Chemical"},{"id":"T288","span":{"begin":168,"end":170},"obj":"Chemical"},{"id":"T289","span":{"begin":191,"end":194},"obj":"Chemical"},{"id":"T292","span":{"begin":195,"end":197},"obj":"Chemical"},{"id":"T294","span":{"begin":211,"end":218},"obj":"Chemical"},{"id":"T295","span":{"begin":220,"end":222},"obj":"Chemical"},{"id":"T296","span":{"begin":224,"end":234},"obj":"Chemical"},{"id":"T297","span":{"begin":236,"end":238},"obj":"Chemical"},{"id":"T298","span":{"begin":264,"end":266},"obj":"Chemical"},{"id":"T300","span":{"begin":268,"end":281},"obj":"Chemical"},{"id":"T301","span":{"begin":392,"end":395},"obj":"Chemical"}],"attributes":[{"id":"A286","pred":"chebi_id","subj":"T286","obj":"http://purl.obolibrary.org/obo/CHEBI_64198"},{"id":"A287","pred":"chebi_id","subj":"T287","obj":"http://purl.obolibrary.org/obo/CHEBI_37163"},{"id":"A288","pred":"chebi_id","subj":"T288","obj":"http://purl.obolibrary.org/obo/CHEBI_74824"},{"id":"A289","pred":"chebi_id","subj":"T289","obj":"http://purl.obolibrary.org/obo/CHEBI_17053"},{"id":"A290","pred":"chebi_id","subj":"T289","obj":"http://purl.obolibrary.org/obo/CHEBI_22660"},{"id":"A291","pred":"chebi_id","subj":"T289","obj":"http://purl.obolibrary.org/obo/CHEBI_29958"},{"id":"A292","pred":"chebi_id","subj":"T292","obj":"http://purl.obolibrary.org/obo/CHEBI_30512"},{"id":"A293","pred":"chebi_id","subj":"T292","obj":"http://purl.obolibrary.org/obo/CHEBI_9141"},{"id":"A294","pred":"chebi_id","subj":"T294","obj":"http://purl.obolibrary.org/obo/CHEBI_59132"},{"id":"A295","pred":"chebi_id","subj":"T295","obj":"http://purl.obolibrary.org/obo/CHEBI_73807"},{"id":"A296","pred":"chebi_id","subj":"T296","obj":"http://purl.obolibrary.org/obo/CHEBI_35718"},{"id":"A297","pred":"chebi_id","subj":"T297","obj":"http://purl.obolibrary.org/obo/CHEBI_74062"},{"id":"A298","pred":"chebi_id","subj":"T298","obj":"http://purl.obolibrary.org/obo/CHEBI_74120"},{"id":"A299","pred":"chebi_id","subj":"T298","obj":"http://purl.obolibrary.org/obo/CHEBI_27680"},{"id":"A300","pred":"chebi_id","subj":"T300","obj":"http://purl.obolibrary.org/obo/CHEBI_27680"},{"id":"A301","pred":"chebi_id","subj":"T301","obj":"http://purl.obolibrary.org/obo/CHEBI_17642"},{"id":"A302","pred":"chebi_id","subj":"T301","obj":"http://purl.obolibrary.org/obo/CHEBI_8058"}],"text":"Proposed screening and diagnostic algorithm for coronavirus disease-2019 associated pulmonary aspergillosis (CAPA). BAL: bronchoalveolar lavage; BDG: (1–3)-β-D-glucan; TA: tracheal aspirate; Asp Ag: aspergillus antigen; AF: antifungal; IA: invasive aspergillosis; GM: galactomannan; EORTC: European Organization for Research and Treatment of Cancer; NBL: non-directed bronchoalveolar lavage; PCP: Pneumocystis pneumonia."}

{"project":"LitCovid-PD-GlycoEpitope","denotations":[{"id":"T33","span":{"begin":264,"end":266},"obj":"GlycoEpitope"},{"id":"T34","span":{"begin":268,"end":281},"obj":"GlycoEpitope"}],"attributes":[{"id":"A33","pred":"glyco_epitope_db_id","subj":"T33","obj":"http://www.glycoepitope.jp/epitopes/EP0510"},{"id":"A34","pred":"glyco_epitope_db_id","subj":"T34","obj":"http://www.glycoepitope.jp/epitopes/EP0510"}],"text":"Proposed screening and diagnostic algorithm for coronavirus disease-2019 associated pulmonary aspergillosis (CAPA). BAL: bronchoalveolar lavage; BDG: (1–3)-β-D-glucan; TA: tracheal aspirate; Asp Ag: aspergillus antigen; AF: antifungal; IA: invasive aspergillosis; GM: galactomannan; EORTC: European Organization for Research and Treatment of Cancer; NBL: non-directed bronchoalveolar lavage; PCP: Pneumocystis pneumonia."}

{"project":"LitCovid-sentences","denotations":[{"id":"T102","span":{"begin":116,"end":289},"obj":"Sentence"},{"id":"T103","span":{"begin":290,"end":396},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Proposed screening and diagnostic algorithm for coronavirus disease-2019 associated pulmonary aspergillosis (CAPA). BAL: bronchoalveolar lavage; BDG: (1–3)-β-D-glucan; TA: tracheal aspirate; Asp Ag: aspergillus antigen; AF: antifungal; IA: invasive aspergillosis; GM: galactomannan; EORTC: European Organization for Research and Treatment of Cancer; NBL: non-directed bronchoalveolar lavage; PCP: Pneumocystis pneumonia."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T48","span":{"begin":342,"end":348},"obj":"Phenotype"}],"attributes":[{"id":"A48","pred":"hp_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/HP_0002664"}],"text":"Proposed screening and diagnostic algorithm for coronavirus disease-2019 associated pulmonary aspergillosis (CAPA). BAL: bronchoalveolar lavage; BDG: (1–3)-β-D-glucan; TA: tracheal aspirate; Asp Ag: aspergillus antigen; AF: antifungal; IA: invasive aspergillosis; GM: galactomannan; EORTC: European Organization for Research and Treatment of Cancer; NBL: non-directed bronchoalveolar lavage; PCP: Pneumocystis pneumonia."}