PMC:7377212 / 15397-16082
Annnotations
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T118 | 18-26 | SP_7 | denotes | for CAP |
| T119 | 223-233 | SP_7 | denotes | acteristic |
| T120 | 234-239 | NCBITaxon:10239 | denotes | CT fe |
| T121 | 357-362 | UBERON:0001443 | denotes | they |
| T122 | 375-386 | NCBITaxon:5052 | denotes | irmed to be |
| T123 | 387-394 | CHEBI:59132;CHEBI:59132 | denotes | IPA [30 |
| T124 | 412-417 | UBERON:0001977 | denotes | of ty |
| T125 | 429-442 | CHEBI:27680;CHEBI:27680 | denotes | ve aspergillo |
| T126 | 485-496 | NCBITaxon:5052 | denotes | classical f |
| T127 | 613-621 | SP_7 | denotes | and red |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T39 | 79-84 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T40 | 134-139 | Body_part | denotes | serum | http://purl.org/sig/ont/fma/fma63083 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T36 | 79-84 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T37 | 134-139 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 430 | 423-445 | Disease | denotes | invasive aspergillosis | MESH:D055744 |
| 498 | 347-355 | Species | denotes | patients | Tax:9606 |
| 499 | 97-108 | Species | denotes | Aspergillus | Tax:746128 |
| 500 | 190-201 | Species | denotes | aspergillus | Tax:746128 |
| 503 | 338-346 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T172 | 23-27 | Disease | denotes | CAPA | http://purl.obolibrary.org/obo/MONDO_0007163 |
| T173 | 249-271 | Disease | denotes | invasive aspergillosis | http://purl.obolibrary.org/obo/MONDO_0000240 |
| T174 | 258-271 | Disease | denotes | aspergillosis | http://purl.obolibrary.org/obo/MONDO_0005657 |
| T175 | 338-346 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T176 | 423-445 | Disease | denotes | invasive aspergillosis | http://purl.obolibrary.org/obo/MONDO_0000240 |
| T177 | 432-445 | Disease | denotes | aspergillosis | http://purl.obolibrary.org/obo/MONDO_0005657 |
| T178 | 553-557 | Disease | denotes | CAPA | http://purl.obolibrary.org/obo/MONDO_0007163 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T142 | 42-43 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T143 | 79-84 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T144 | 117-122 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
| T145 | 175-180 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T232 | 109-116 | Chemical | denotes | antigen | http://purl.obolibrary.org/obo/CHEBI_59132 |
| T233 | 126-129 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
| T234 | 150-152 | Chemical | denotes | GM | http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680 |
| T236 | 387-390 | Chemical | denotes | IPA | http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802 |
MyTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32703771-28680526-29390911 | 182-184 | 28680526 | denotes | 28 |
| 32703771-32130038-29390912 | 392-394 | 32130038 | denotes | 30 |
LitCovid-PD-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
|---|---|---|---|---|---|
| T20 | 150-152 | GlycoEpitope | denotes | GM | http://www.glycoepitope.jp/epitopes/EP0510 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T79 | 0-211 | Sentence | denotes | Ideally, screening for CAPA entails using a combination of computed tomography chest imaging and Aspergillus antigen tests on BAL and serum including GM ELISA or lateral-flow tests [28], or aspergillus PCR [29]. |
| T80 | 212-396 | Sentence | denotes | Whilst characteristic CT features of invasive aspergillosis such as nodules with halo sign were seen in 17.6% of severely ill COVID-19 patients, they were not confirmed to be IPA [30]. |
| T81 | 397-685 | Sentence | denotes | Given the lack of typical invasive aspergillosis features on CT in IAPA, the absence of classical findings such as cavitation should not be used to exclude CAPA; however, their presence can help support the diagnosis and reduce the burden of evidence placed on mycological investigations. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32703771-28680526-29390911 | 182-184 | 28680526 | denotes | 28 |
| 32703771-32130038-29390912 | 392-394 | 32130038 | denotes | 30 |