PMC:7377212 / 151-879
Annnotations
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 30-38 | SP_7 | denotes | COVID-19 |
| T5 | 40-45 | NCBITaxon:10239 | denotes | virus |
| T6 | 91-102 | NCBITaxon:1 | denotes | individuals |
| T7 | 159-167 | SP_7 | denotes | COVID-19 |
| T8 | 194-205 | UBERON:0001004 | denotes | respiratory |
| T9 | 244-249 | NCBITaxon:10239 | denotes | viral |
| T10 | 344-355 | GO:0015671 | denotes | oxygenation |
| T11 | 404-413 | NCBITaxon:2 | denotes | bacterial |
| T12 | 448-471 | UBERON:0001558 | denotes | lower respiratory tract |
| T13 | 472-477 | NCBITaxon:10239 | denotes | viral |
| T14 | 550-558 | SP_7 | denotes | COVID-19 |
| T15 | 568-581 | CHEBI:35718;CHEBI:35718 | denotes | antimicrobial |
| T16 | 616-622 | NCBITaxon:4751 | denotes | fungal |
| T17 | 651-659 | SP_7 | denotes | COVID-19 |
| T18 | 671-680 | UBERON:0002048 | denotes | pulmonary |
| T59221 | 550-558 | SP_7 | denotes | COVID-19 |
| T9877 | 568-581 | CHEBI:35718;CHEBI:35718 | denotes | antimicrobial |
| T12804 | 616-622 | NCBITaxon:4751 | denotes | fungal |
| T73228 | 651-659 | SP_7 | denotes | COVID-19 |
| T60783 | 671-680 | UBERON:0002048 | denotes | pulmonary |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T1 | 448-471 | Body_part | denotes | lower respiratory tract | http://purl.org/sig/ont/fma/fma45662 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 448-471 | Body_part | denotes | lower respiratory tract | http://purl.obolibrary.org/obo/UBERON_0001558 |
| T2 | 454-471 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T5 | 4-28 | Disease | denotes | coronavirus disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T6 | 30-38 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T7 | 159-167 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T8 | 188-223 | Disease | denotes | acute respiratory distress syndrome | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T9 | 194-223 | Disease | denotes | respiratory distress syndrome | http://purl.obolibrary.org/obo/MONDO_0009971 |
| T10 | 225-229 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T11 | 250-261 | Disease | denotes | pneumonitis | http://purl.obolibrary.org/obo/MONDO_0043905 |
| T12 | 417-426 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T13 | 472-487 | Disease | denotes | viral infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T14 | 478-487 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T15 | 550-558 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T16 | 626-635 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T17 | 651-659 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T18 | 681-694 | Disease | denotes | aspergillosis | http://purl.obolibrary.org/obo/MONDO_0005657 |
| T19 | 696-700 | Disease | denotes | CAPA | http://purl.obolibrary.org/obo/MONDO_0007163 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 40-45 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T2 | 53-54 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T3 | 335-343 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
| T4 | 430-431 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T5 | 448-471 | http://purl.obolibrary.org/obo/UBERON_0001558 | denotes | lower respiratory tract |
| T6 | 502-503 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T1 | 568-581 | Chemical | denotes | antimicrobial | http://purl.obolibrary.org/obo/CHEBI_33281 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 472-487 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infection |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 0-151 | Sentence | denotes | The coronavirus disease 2019 (COVID-19) virus caused a wide spectrum of disease in healthy individuals, as well as those with common comorbidities [1]. |
| T4 | 152-360 | Sentence | denotes | Severe COVID-19 is characterised by acute respiratory distress syndrome (ARDS) secondary to viral pneumonitis, treatment of which may require mechanical ventilation or extracorporeal membrane oxygenation [2]. |
| T5 | 361-594 | Sentence | denotes | Clinicians are alert to the possibility of bacterial co-infection as a complication of lower respiratory tract viral infection; for example, a recent review found that 72% of patients with COVID-19 received antimicrobial therapy [3]. |
| T6 | 595-728 | Sentence | denotes | However, the risk of fungal co-infection, in particular COVID-19 associated pulmonary aspergillosis (CAPA), remains underappreciated. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 194-214 | Phenotype | denotes | respiratory distress | http://purl.obolibrary.org/obo/HP_0002098 |