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PMC:7377212 / 151-879 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T4 30-38 SP_7 denotes COVID-19
T5 40-45 NCBITaxon:10239 denotes virus
T6 91-102 NCBITaxon:1 denotes individuals
T7 159-167 SP_7 denotes COVID-19
T8 194-205 UBERON:0001004 denotes respiratory
T9 244-249 NCBITaxon:10239 denotes viral
T10 344-355 GO:0015671 denotes oxygenation
T11 404-413 NCBITaxon:2 denotes bacterial
T12 448-471 UBERON:0001558 denotes lower respiratory tract
T13 472-477 NCBITaxon:10239 denotes viral
T14 550-558 SP_7 denotes COVID-19
T15 568-581 CHEBI:35718;CHEBI:35718 denotes antimicrobial
T16 616-622 NCBITaxon:4751 denotes fungal
T17 651-659 SP_7 denotes COVID-19
T18 671-680 UBERON:0002048 denotes pulmonary
T59221 550-558 SP_7 denotes COVID-19
T9877 568-581 CHEBI:35718;CHEBI:35718 denotes antimicrobial
T12804 616-622 NCBITaxon:4751 denotes fungal
T73228 651-659 SP_7 denotes COVID-19
T60783 671-680 UBERON:0002048 denotes pulmonary

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 448-471 Body_part denotes lower respiratory tract http://purl.org/sig/ont/fma/fma45662

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 448-471 Body_part denotes lower respiratory tract http://purl.obolibrary.org/obo/UBERON_0001558
T2 454-471 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T5 4-28 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T6 30-38 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T7 159-167 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T8 188-223 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T9 194-223 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T10 225-229 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T11 250-261 Disease denotes pneumonitis http://purl.obolibrary.org/obo/MONDO_0043905
T12 417-426 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T13 472-487 Disease denotes viral infection http://purl.obolibrary.org/obo/MONDO_0005108
T14 478-487 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T15 550-558 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T16 626-635 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T17 651-659 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T18 681-694 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T19 696-700 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 40-45 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T2 53-54 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T3 335-343 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T4 430-431 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 448-471 http://purl.obolibrary.org/obo/UBERON_0001558 denotes lower respiratory tract
T6 502-503 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 568-581 Chemical denotes antimicrobial http://purl.obolibrary.org/obo/CHEBI_33281

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 472-487 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infection

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T3 0-151 Sentence denotes The coronavirus disease 2019 (COVID-19) virus caused a wide spectrum of disease in healthy individuals, as well as those with common comorbidities [1].
T4 152-360 Sentence denotes Severe COVID-19 is characterised by acute respiratory distress syndrome (ARDS) secondary to viral pneumonitis, treatment of which may require mechanical ventilation or extracorporeal membrane oxygenation [2].
T5 361-594 Sentence denotes Clinicians are alert to the possibility of bacterial co-infection as a complication of lower respiratory tract viral infection; for example, a recent review found that 72% of patients with COVID-19 received antimicrobial therapy [3].
T6 595-728 Sentence denotes However, the risk of fungal co-infection, in particular COVID-19 associated pulmonary aspergillosis (CAPA), remains underappreciated.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 194-214 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098