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PMC:7377212 / 1118-1846 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T24 4-25 SP_7 denotes coronavirus disease 2
T25 30-38 SP_7 denotes COVID-19
T26 40-45 NCBITaxon:10239 denotes virus
T27 91-102 NCBITaxon:1 denotes individuals
T28 159-167 SP_7 denotes COVID-19
T29 194-205 UBERON:0001004 denotes respiratory
T30 244-249 NCBITaxon:10239 denotes viral
T31 344-355 GO:0015671 denotes oxygenation
T32 404-413 NCBITaxon:2 denotes bacterial
T33 448-471 UBERON:0001558 denotes lower respiratory tract
T34 472-477 NCBITaxon:10239 denotes viral
T35 550-558 SP_7 denotes COVID-19
T36 568-581 CHEBI:35718;CHEBI:35718 denotes antimicrobial
T37 616-622 NCBITaxon:4751 denotes fungal
T38 651-659 SP_7 denotes COVID-19
T39 671-680 UBERON:0002048 denotes pulmonary
T73730 30-38 SP_7 denotes COVID-19
T85102 40-45 NCBITaxon:10239 denotes virus
T81036 91-102 NCBITaxon:1 denotes individuals
T16805 159-167 SP_7 denotes COVID-19
T23436 194-205 UBERON:0001004 denotes respiratory
T90565 244-249 NCBITaxon:10239 denotes viral
T80972 344-355 GO:0015671 denotes oxygenation
T23433 404-413 NCBITaxon:2 denotes bacterial
T48068 448-471 UBERON:0001558 denotes lower respiratory tract
T57817 472-477 NCBITaxon:10239 denotes viral
T8958 550-558 SP_7 denotes COVID-19
T86360 568-581 CHEBI:35718;CHEBI:35718 denotes antimicrobial
T64802 616-622 NCBITaxon:4751 denotes fungal
T86299 651-659 SP_7 denotes COVID-19
T12819 671-680 UBERON:0002048 denotes pulmonary

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T3 448-471 Body_part denotes lower respiratory tract http://purl.org/sig/ont/fma/fma45662

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T4 448-471 Body_part denotes lower respiratory tract http://purl.obolibrary.org/obo/UBERON_0001558
T5 454-471 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T26 4-28 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T27 30-38 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T28 159-167 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T29 188-223 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T30 194-223 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T31 225-229 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T32 250-261 Disease denotes pneumonitis http://purl.obolibrary.org/obo/MONDO_0043905
T33 417-426 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T34 472-487 Disease denotes viral infection http://purl.obolibrary.org/obo/MONDO_0005108
T35 478-487 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T36 550-558 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T37 626-635 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T38 651-659 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T39 681-694 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T40 696-700 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T10 40-45 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T11 53-54 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 335-343 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T13 430-431 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 448-471 http://purl.obolibrary.org/obo/UBERON_0001558 denotes lower respiratory tract
T15 502-503 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T2 568-581 Chemical denotes antimicrobial http://purl.obolibrary.org/obo/CHEBI_33281

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T2 472-487 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infection

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T8 0-151 Sentence denotes The coronavirus disease 2019 (COVID-19) virus caused a wide spectrum of disease in healthy individuals, as well as those with common comorbidities [1].
T9 152-360 Sentence denotes Severe COVID-19 is characterised by acute respiratory distress syndrome (ARDS) secondary to viral pneumonitis, treatment of which may require mechanical ventilation or extracorporeal membrane oxygenation [2].
T10 361-594 Sentence denotes Clinicians are alert to the possibility of bacterial co-infection as a complication of lower respiratory tract viral infection; for example, a recent review found that 72% of patients with COVID-19 received antimicrobial therapy [3].
T11 595-728 Sentence denotes However, the risk of fungal co-infection, in particular COVID-19 associated pulmonary aspergillosis (CAPA), remains underappreciated.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T3 194-214 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098