> top > docs > PMC:7376845 > spans > 15693-16388 > annotations

PMC:7376845 / 15693-16388 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T96 418-428 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T97 534-541 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
378 181-189 Species denotes SARS-CoV Tax:694009
379 196-206 Species denotes SARS-CoV-2 Tax:2697049
380 319-324 Species denotes human Tax:9606
381 337-350 Species denotes coronaviruses Tax:11118
382 446-456 Species denotes SARS-CoV-2 Tax:2697049
383 461-469 Species denotes SARS-CoV Tax:694009
384 654-667 Species denotes coronaviruses Tax:11118
385 678-684 Species denotes humans Tax:9606
386 351-355 Species denotes 229E Tax:11137
387 357-361 Species denotes NL63 Tax:277944
388 363-367 Species denotes OC43 Tax:31631
389 372-376 Species denotes HKU1 Tax:290028
390 310-314 Disease denotes MERS MESH:D018352
391 635-639 Disease denotes MERS MESH:D018352

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T137 181-189 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T138 181-185 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T139 196-204 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T140 196-200 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T141 325-336 Disease denotes common cold http://purl.obolibrary.org/obo/MONDO_0005709
T142 446-454 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T143 446-450 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T144 461-469 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T145 461-465 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T171 26-28 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T172 26-28 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T173 274-277 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T174 294-297 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T175 319-324 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T176 678-684 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T140 26-28 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T141 418-423 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T142 424-428 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T143 534-541 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T112 0-218 Sentence denotes Sequence alignment of the S2 fragment corresponding to residues 1029 to 1192 shows that this fragment, which encompasses the heptad repeat (HR)2 but not HR1, is highly conserved in SARS-CoV-1 and SARS-CoV-2 (Figure 1).
T113 219-695 Sentence denotes When compared with additional reference sequences from bat RaTG13 (closest bat precursor), MERS and human common cold coronaviruses 229E, NL63, OC43 and HKU1 (Figure 1), it becomes apparent that the amino-acid identity between SARS-CoV-2 and SARS-CoV-1 is much higher in this region (93%, Table) than over the full protein length (78%, Table) and the similarity drops sharply (< 40% in this region) when considering MERS and the other coronaviruses infecting humans regularly.