PMC:7376845 / 14229-14510 JSONTXT

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{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7376845","sourcedb":"PMC","sourceid":"7376845","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7376845","text":"A multiple sequence alignment was created with multiple alignment using fast Fourier transform (MAFFT) using the slow but accurate L-INS-I parameter settings [24] and the alignment curated, cut to the target region 1029–1192 (SARS-CoV-1 numbering) and visualised with Jalview [25].","tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"345","span":{"begin":226,"end":234},"obj":"Species"}],"attributes":[{"id":"A345","pred":"tao:has_database_id","subj":"345","obj":"Tax:694009"},{"subj":"345","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T128","span":{"begin":226,"end":234},"obj":"Disease"},{"id":"T129","span":{"begin":226,"end":230},"obj":"Disease"}],"attributes":[{"id":"A128","pred":"mondo_id","subj":"T128","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A129","pred":"mondo_id","subj":"T129","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T128","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T129","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T166","span":{"begin":0,"end":1},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T166","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T101","span":{"begin":0,"end":281},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T101","pred":"source","obj":"LitCovid-sentences"}]},{"project":"2_test","denotations":[{"id":"32700671-29506019-29327479","span":{"begin":159,"end":161},"obj":"29506019"},{"id":"32700671-19151095-29327480","span":{"begin":277,"end":279},"obj":"19151095"}],"attributes":[{"subj":"32700671-29506019-29327479","pred":"source","obj":"2_test"},{"subj":"32700671-19151095-29327480","pred":"source","obj":"2_test"}]},{"project":"MyTest","denotations":[{"id":"32700671-29506019-29327479","span":{"begin":159,"end":161},"obj":"29506019"},{"id":"32700671-19151095-29327480","span":{"begin":277,"end":279},"obj":"19151095"}],"namespaces":[{"prefix":"_base","uri":"https://www.uniprot.org/uniprot/testbase"},{"prefix":"UniProtKB","uri":"https://www.uniprot.org/uniprot/"},{"prefix":"uniprot","uri":"https://www.uniprot.org/uniprotkb/"}],"attributes":[{"subj":"32700671-29506019-29327479","pred":"source","obj":"MyTest"},{"subj":"32700671-19151095-29327480","pred":"source","obj":"MyTest"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#93eca7","default":true},{"id":"LitCovid-PD-MONDO","color":"#ec9398"},{"id":"LitCovid-PD-CLO","color":"#93b3ec"},{"id":"LitCovid-sentences","color":"#cdec93"},{"id":"2_test","color":"#ec93e7"},{"id":"MyTest","color":"#93ecd7"}]}]}}