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PMC:7371427 / 35349-35674 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T437 51-55 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T438 131-146 Body_part denotes small intestine http://purl.org/sig/ont/fma/fma7200
T439 223-227 Body_part denotes Gene http://purl.org/sig/ont/fma/fma74402
T440 270-273 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T441 301-316 Body_part denotes small intestine http://purl.org/sig/ont/fma/fma7200

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T179 131-146 Body_part denotes small intestine http://purl.obolibrary.org/obo/UBERON_0002108
T180 137-146 Body_part denotes intestine http://purl.obolibrary.org/obo/UBERON_0000160
T181 301-316 Body_part denotes small intestine http://purl.obolibrary.org/obo/UBERON_0002108
T182 307-316 Body_part denotes intestine http://purl.obolibrary.org/obo/UBERON_0000160

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T658 1-2 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T659 51-55 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T660 92-97 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T661 101-102 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T662 125-130 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T663 131-146 http://purl.obolibrary.org/obo/UBERON_0002108 denotes small intestine
T664 149-150 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T665 152-157 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Genes
T666 223-227 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Gene
T667 295-300 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T668 301-316 http://purl.obolibrary.org/obo/UBERON_0002108 denotes small intestine

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T44 51-66 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T45 223-238 http://purl.obolibrary.org/obo/GO_0010467 denotes Gene expression

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T211 0-325 Sentence denotes (A) Distribution of cosine similarity between the ‘gene expression vectors’ of ACE2 and all genes in a scRNAseq study of the human small intestine. (B) Genes similar to ACE2 sorted by literature-derivation association. (C) Gene expression correlations to ACE2 from bulk RNA-sequencing (GTEx) of human small intestine samples.