PMC:7371427 / 30140-31010 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7371427","sourcedb":"PMC","sourceid":"7371427","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7371427","text":"Triangulation of ACE2 expression in the gastrointestinal (GI) tract with literature-derived insights.\n(A) Schematic representation of the GI tract highlighting key cell types. Scatterplot shows comparison of percentage of cells with non-zero expression (x-axis) from nine single cell studies against literature-derived associations: local score (y-axis and size of circles) and global score (transparency of circles). (B) Assessing literature-based and scRNAseq-based association between ACE2 and tongue keratinocytes. Violin plot shows distributions of ACE2 expression in keratinocytes. The literature-derived local and global associations between ACE2 and keratinocytes are shown. (C) ACE2 transcriptional expression is correlated to enterocyte maturation. Violin plots show distribution of ACE2 expression levels in enterocytes at different stages of differentiation.","divisions":[{"label":"title","span":{"begin":0,"end":101}}],"tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T377","span":{"begin":164,"end":168},"obj":"Body_part"},{"id":"T378","span":{"begin":222,"end":227},"obj":"Body_part"},{"id":"T379","span":{"begin":256,"end":260},"obj":"Body_part"},{"id":"T380","span":{"begin":279,"end":283},"obj":"Body_part"},{"id":"T381","span":{"begin":348,"end":352},"obj":"Body_part"},{"id":"T382","span":{"begin":497,"end":503},"obj":"Body_part"},{"id":"T383","span":{"begin":504,"end":517},"obj":"Body_part"},{"id":"T384","span":{"begin":573,"end":586},"obj":"Body_part"},{"id":"T385","span":{"begin":658,"end":671},"obj":"Body_part"},{"id":"T386","span":{"begin":736,"end":746},"obj":"Body_part"},{"id":"T387","span":{"begin":819,"end":830},"obj":"Body_part"}],"attributes":[{"id":"A377","pred":"fma_id","subj":"T377","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A378","pred":"fma_id","subj":"T378","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A379","pred":"fma_id","subj":"T379","obj":"http://purl.org/sig/ont/fma/fma12520"},{"id":"A380","pred":"fma_id","subj":"T380","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A381","pred":"fma_id","subj":"T381","obj":"http://purl.org/sig/ont/fma/fma12520"},{"id":"A382","pred":"fma_id","subj":"T382","obj":"http://purl.org/sig/ont/fma/fma54640"},{"id":"A383","pred":"fma_id","subj":"T383","obj":"http://purl.org/sig/ont/fma/fma62879"},{"id":"A384","pred":"fma_id","subj":"T384","obj":"http://purl.org/sig/ont/fma/fma62879"},{"id":"A385","pred":"fma_id","subj":"T385","obj":"http://purl.org/sig/ont/fma/fma62879"},{"id":"A386","pred":"fma_id","subj":"T386","obj":"http://purl.org/sig/ont/fma/fma62122"},{"id":"A387","pred":"fma_id","subj":"T387","obj":"http://purl.org/sig/ont/fma/fma62122"},{"subj":"T377","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T378","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T379","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T380","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T381","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T382","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T383","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T384","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T385","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T386","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T387","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T159","span":{"begin":497,"end":503},"obj":"Body_part"}],"attributes":[{"id":"A159","pred":"uberon_id","subj":"T159","obj":"http://purl.obolibrary.org/obo/UBERON_0001723"},{"subj":"T159","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T589","span":{"begin":57,"end":67},"obj":"http://purl.obolibrary.org/obo/UBERON_0005409"},{"id":"T590","span":{"begin":103,"end":104},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T591","span":{"begin":138,"end":146},"obj":"http://purl.obolibrary.org/obo/UBERON_0005409"},{"id":"T592","span":{"begin":164,"end":174},"obj":"http://purl.obolibrary.org/obo/CL_0000000"},{"id":"T593","span":{"begin":222,"end":227},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T594","span":{"begin":279,"end":283},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T595","span":{"begin":419,"end":420},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T596","span":{"begin":497,"end":503},"obj":"http://purl.obolibrary.org/obo/UBERON_0001723"},{"id":"T597","span":{"begin":504,"end":517},"obj":"http://purl.obolibrary.org/obo/CL_0000312"},{"id":"T598","span":{"begin":573,"end":586},"obj":"http://purl.obolibrary.org/obo/CL_0000312"},{"id":"T599","span":{"begin":658,"end":671},"obj":"http://purl.obolibrary.org/obo/CL_0000312"}],"attributes":[{"subj":"T589","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T590","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T591","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T592","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T593","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T594","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T595","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T596","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T597","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T598","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T599","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T66","span":{"begin":58,"end":60},"obj":"Chemical"},{"id":"T67","span":{"begin":138,"end":140},"obj":"Chemical"}],"attributes":[{"id":"A66","pred":"chebi_id","subj":"T66","obj":"http://purl.obolibrary.org/obo/CHEBI_73907"},{"id":"A67","pred":"chebi_id","subj":"T67","obj":"http://purl.obolibrary.org/obo/CHEBI_73907"},{"subj":"T66","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T67","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T31","span":{"begin":692,"end":707},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"attributes":[{"subj":"T31","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T182","span":{"begin":0,"end":101},"obj":"Sentence"},{"id":"T183","span":{"begin":102,"end":175},"obj":"Sentence"},{"id":"T184","span":{"begin":176,"end":518},"obj":"Sentence"},{"id":"T185","span":{"begin":519,"end":587},"obj":"Sentence"},{"id":"T186","span":{"begin":588,"end":758},"obj":"Sentence"},{"id":"T187","span":{"begin":759,"end":870},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T182","pred":"source","obj":"LitCovid-sentences"},{"subj":"T183","pred":"source","obj":"LitCovid-sentences"},{"subj":"T184","pred":"source","obj":"LitCovid-sentences"},{"subj":"T185","pred":"source","obj":"LitCovid-sentences"},{"subj":"T186","pred":"source","obj":"LitCovid-sentences"},{"subj":"T187","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#c0ec93","default":true},{"id":"LitCovid-PD-UBERON","color":"#ec93da"},{"id":"LitCovid-PD-CLO","color":"#93ece3"},{"id":"LitCovid-PD-CHEBI","color":"#ecc993"},{"id":"LitCovid-PD-GO-BP","color":"#af93ec"},{"id":"LitCovid-sentences","color":"#93ec95"}]}]}}