PMC:7366549 / 6318-7342 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/7366549","sourcedb":"PMC","sourceid":"7366549","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7366549","text":"Study sites and sample collection: Upon obtaining permission from the respective State authorities, bat-roosting sites in each State/UT were identified with the help of the forest officials. Bats were trapped using mist nets and were chemically restrained using isoflurane anaesthesia. Throat swabs (TS) and rectal swabs (RSs) were collected in virus transport medium (VTM) and were transported to ICMR-NIV, Pune, on dry ice. The specimens were collected from Pteropus spp. bats from Kerala, Karnataka, Chandigarh, Gujarat, Himachal Pradesh, Odisha, Puducherry, Punjab, Tamil Nadu and Telangana and Rousettus spp. bats from Kerala, Karnataka, Chandigarh, Gujarat, Odisha, Punjab and Telangana States during 2018-2019. These bats were monitored and released after recovery. Twelve bats that died during the trapping process were transported to ICMR-NIV on dry ice. Necropsy of these bats was carried out in the Biosafety Level 4 (BSL-4) containment facility, and tissue specimens (intestine and kidney) collected were tested.","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T15","span":{"begin":286,"end":292},"obj":"Body_part"},{"id":"T16","span":{"begin":962,"end":968},"obj":"Body_part"},{"id":"T17","span":{"begin":980,"end":989},"obj":"Body_part"},{"id":"T18","span":{"begin":994,"end":1000},"obj":"Body_part"}],"attributes":[{"id":"A15","pred":"fma_id","subj":"T15","obj":"http://purl.org/sig/ont/fma/fma228738"},{"id":"A16","pred":"fma_id","subj":"T16","obj":"http://purl.org/sig/ont/fma/fma9637"},{"id":"A17","pred":"fma_id","subj":"T17","obj":"http://purl.org/sig/ont/fma/fma7199"},{"id":"A18","pred":"fma_id","subj":"T18","obj":"http://purl.org/sig/ont/fma/fma7203"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T17","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T18","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T3","span":{"begin":286,"end":292},"obj":"Body_part"},{"id":"T4","span":{"begin":962,"end":968},"obj":"Body_part"},{"id":"T5","span":{"begin":980,"end":989},"obj":"Body_part"},{"id":"T6","span":{"begin":994,"end":1000},"obj":"Body_part"}],"attributes":[{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0000341"},{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/UBERON_0000479"},{"id":"A5","pred":"uberon_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/UBERON_0000160"},{"id":"A6","pred":"uberon_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"154","span":{"begin":460,"end":468},"obj":"Species"},{"id":"155","span":{"begin":599,"end":608},"obj":"Species"},{"id":"156","span":{"begin":262,"end":272},"obj":"Chemical"},{"id":"157","span":{"begin":790,"end":794},"obj":"Disease"}],"attributes":[{"id":"A154","pred":"tao:has_database_id","subj":"154","obj":"Tax:143291"},{"id":"A155","pred":"tao:has_database_id","subj":"155","obj":"Tax:9408"},{"id":"A156","pred":"tao:has_database_id","subj":"156","obj":"MESH:D007530"},{"id":"A157","pred":"tao:has_database_id","subj":"157","obj":"MESH:D003643"},{"subj":"154","pred":"source","obj":"LitCovid-PubTator"},{"subj":"155","pred":"source","obj":"LitCovid-PubTator"},{"subj":"156","pred":"source","obj":"LitCovid-PubTator"},{"subj":"157","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T21","span":{"begin":300,"end":302},"obj":"Disease"}],"attributes":[{"id":"A21","pred":"mondo_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/MONDO_0010979"},{"id":"A22","pred":"mondo_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/MONDO_0016455"},{"subj":"T21","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T84","span":{"begin":100,"end":103},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T85","span":{"begin":191,"end":195},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T86","span":{"begin":345,"end":350},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T87","span":{"begin":474,"end":478},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T88","span":{"begin":614,"end":618},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T89","span":{"begin":707,"end":711},"obj":"http://purl.obolibrary.org/obo/CLO_0001185"},{"id":"T90","span":{"begin":724,"end":728},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T91","span":{"begin":780,"end":784},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T92","span":{"begin":882,"end":886},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T93","span":{"begin":980,"end":989},"obj":"http://purl.obolibrary.org/obo/UBERON_0000160"},{"id":"T94","span":{"begin":980,"end":989},"obj":"http://www.ebi.ac.uk/efo/EFO_0000834"},{"id":"T95","span":{"begin":994,"end":1000},"obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"T96","span":{"begin":994,"end":1000},"obj":"http://www.ebi.ac.uk/efo/EFO_0000927"},{"id":"T97","span":{"begin":994,"end":1000},"obj":"http://www.ebi.ac.uk/efo/EFO_0000929"},{"id":"T98","span":{"begin":1017,"end":1023},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"}],"attributes":[{"subj":"T84","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T85","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T86","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T87","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T88","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T89","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T90","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T91","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T92","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T93","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T94","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T95","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T96","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T97","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T98","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T4","span":{"begin":262,"end":272},"obj":"Chemical"},{"id":"T5","span":{"begin":300,"end":302},"obj":"Chemical"}],"attributes":[{"id":"A4","pred":"chebi_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_6015"},{"id":"A5","pred":"chebi_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/CHEBI_73664"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T5","span":{"begin":351,"end":360},"obj":"http://purl.obolibrary.org/obo/GO_0006810"},{"id":"T6","span":{"begin":383,"end":394},"obj":"http://purl.obolibrary.org/obo/GO_0006810"},{"id":"T7","span":{"begin":828,"end":839},"obj":"http://purl.obolibrary.org/obo/GO_0006810"}],"attributes":[{"subj":"T5","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T47","span":{"begin":0,"end":34},"obj":"Sentence"},{"id":"T48","span":{"begin":35,"end":190},"obj":"Sentence"},{"id":"T49","span":{"begin":191,"end":285},"obj":"Sentence"},{"id":"T50","span":{"begin":286,"end":425},"obj":"Sentence"},{"id":"T51","span":{"begin":426,"end":717},"obj":"Sentence"},{"id":"T52","span":{"begin":718,"end":772},"obj":"Sentence"},{"id":"T53","span":{"begin":773,"end":863},"obj":"Sentence"},{"id":"T54","span":{"begin":864,"end":1024},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T47","pred":"source","obj":"LitCovid-sentences"},{"subj":"T48","pred":"source","obj":"LitCovid-sentences"},{"subj":"T49","pred":"source","obj":"LitCovid-sentences"},{"subj":"T50","pred":"source","obj":"LitCovid-sentences"},{"subj":"T51","pred":"source","obj":"LitCovid-sentences"},{"subj":"T52","pred":"source","obj":"LitCovid-sentences"},{"subj":"T53","pred":"source","obj":"LitCovid-sentences"},{"subj":"T54","pred":"source","obj":"LitCovid-sentences"}]},{"project":"Zoonoses_partialAnnotation","denotations":[{"id":"T136","span":{"begin":492,"end":501},"obj":"Area"},{"id":"T137","span":{"begin":632,"end":641},"obj":"Area"},{"id":"T147","span":{"begin":484,"end":490},"obj":"Area"},{"id":"T148","span":{"begin":624,"end":630},"obj":"Area"},{"id":"T162","span":{"begin":570,"end":580},"obj":"Area"},{"id":"T170","span":{"begin":550,"end":560},"obj":"Area"},{"id":"T176","span":{"begin":503,"end":513},"obj":"Area"},{"id":"T177","span":{"begin":643,"end":653},"obj":"Area"},{"id":"T183","span":{"begin":515,"end":522},"obj":"Area"},{"id":"T184","span":{"begin":655,"end":662},"obj":"Area"},{"id":"T190","span":{"begin":585,"end":594},"obj":"Area"},{"id":"T191","span":{"begin":683,"end":692},"obj":"Area"},{"id":"T197","span":{"begin":524,"end":540},"obj":"Area"},{"id":"T203","span":{"begin":562,"end":568},"obj":"Area"},{"id":"T204","span":{"begin":672,"end":678},"obj":"Area"},{"id":"T210","span":{"begin":542,"end":548},"obj":"Area"},{"id":"T211","span":{"begin":664,"end":670},"obj":"Area"},{"id":"T230","span":{"begin":599,"end":613},"obj":"Species"}],"attributes":[{"id":"A43","pred":"Memo","subj":"T176","obj":"MESH:D007194"},{"id":"A50","pred":"Memo","subj":"T183","obj":"MESH:D007194"},{"id":"A71","pred":"Memo","subj":"T204","obj":"MESH:D007194"},{"id":"A37","pred":"Memo","subj":"T170","obj":"MESH:D007194"},{"id":"A14","pred":"Memo","subj":"T147","obj":"MESH:D007194"},{"id":"A3","pred":"Memo","subj":"T136","obj":"MESH:D007194"},{"id":"A15","pred":"Memo","subj":"T148","obj":"MESH:D007194"},{"id":"A29","pred":"Memo","subj":"T162","obj":"MESH:D007194"},{"id":"A51","pred":"Memo","subj":"T184","obj":"MESH:D007194"},{"id":"A70","pred":"Memo","subj":"T203","obj":"MESH:D007194"},{"id":"A86","pred":"Memo","subj":"T230","obj":"Tax:2640345"},{"id":"A58","pred":"Memo","subj":"T191","obj":"MESH:D007194"},{"id":"A57","pred":"Memo","subj":"T190","obj":"MESH:D007194"},{"id":"A64","pred":"Memo","subj":"T197","obj":"MESH:D007194"},{"id":"A77","pred":"Memo","subj":"T210","obj":"MESH:D007194"},{"id":"A78","pred":"Memo","subj":"T211","obj":"MESH:D007194"},{"id":"A44","pred":"Memo","subj":"T177","obj":"MESH:D007194"},{"id":"A4","pred":"Memo","subj":"T137","obj":"MESH:D007194"},{"subj":"T136","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T137","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T147","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T148","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T162","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T170","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T176","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T177","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T183","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T184","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T190","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T191","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T197","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T203","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T204","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T210","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T211","pred":"source","obj":"Zoonoses_partialAnnotation"},{"subj":"T230","pred":"source","obj":"Zoonoses_partialAnnotation"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#a5ec93","default":true},{"id":"LitCovid-PD-UBERON","color":"#ec93bf"},{"id":"LitCovid-PubTator","color":"#93d9ec"},{"id":"LitCovid-PD-MONDO","color":"#ece593"},{"id":"LitCovid-PD-CLO","color":"#ca93ec"},{"id":"LitCovid-PD-CHEBI","color":"#93ecb0"},{"id":"LitCovid-PD-GO-BP","color":"#ec9693"},{"id":"LitCovid-sentences","color":"#93a9ec"},{"id":"Zoonoses_partialAnnotation","color":"#c3ec93"}]}]}}