PMC:7366549 / 4574-5922 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T14","span":{"begin":573,"end":576},"obj":"Body_part"}],"attributes":[{"id":"A14","pred":"fma_id","subj":"T14","obj":"http://purl.org/sig/ont/fma/fma67095"}],"text":"India has a diverse population of bats; around 117 species of bats have been recorded, with around 100 subspecies coming under 39 genera belonging to eight families (Pteropodidae, Rhinolophidae, Hipposideridae, Megadermatidae, Rhinopomatidae, Emballonuridae, Molossidae and Vespertilionidae)12. The Indian Council of Medical Research-National Institute of Virology (ICMR-NIV) at Pune, India, has detected several viruses in bats, including the Nipah virus in Pteropus medius, Malsoor virus, Tioman virus and a novel adenovirus in Rousettus leschenaultii131415. Nipah viral RNA antibodies could be detected in Pteropus bats from many States of India, and the possible link of transmission from bats could be established during the Nipah outbreak which occurred in Kerala in 2018 and 20191617. The use of conventional polymerase chain reaction/reverse transcription-polymerase chain reaction (PCR/RT-PCR), as well as metagenomics and next-generation sequencing (NGS) technologies, has led to the discovery of many novel viruses in bats. The identification of new CoVs in bats in several neighbouring Asian countries such as China3, Sri Lanka18 and Singapore1920 and the growing threats of novel CoV diseases such as COVID-19 led us to investigate Pteropus and Rousettus bats commonly found in India, for identification and characterization of BtCoVs."}

{"project":"LitCovid-PubTator","denotations":[{"id":"138","span":{"begin":444,"end":455},"obj":"Species"},{"id":"139","span":{"begin":459,"end":474},"obj":"Species"},{"id":"140","span":{"begin":476,"end":489},"obj":"Species"},{"id":"141","span":{"begin":491,"end":503},"obj":"Species"},{"id":"142","span":{"begin":516,"end":526},"obj":"Species"},{"id":"143","span":{"begin":530,"end":553},"obj":"Species"},{"id":"144","span":{"begin":1061,"end":1065},"obj":"Species"},{"id":"145","span":{"begin":609,"end":617},"obj":"Species"},{"id":"146","span":{"begin":1245,"end":1253},"obj":"Species"},{"id":"147","span":{"begin":1258,"end":1267},"obj":"Species"},{"id":"148","span":{"begin":1193,"end":1205},"obj":"Disease"},{"id":"149","span":{"begin":1214,"end":1222},"obj":"Disease"}],"attributes":[{"id":"A138","pred":"tao:has_database_id","subj":"138","obj":"Tax:121791"},{"id":"A139","pred":"tao:has_database_id","subj":"139","obj":"Tax:143291"},{"id":"A140","pred":"tao:has_database_id","subj":"140","obj":"Tax:1445418"},{"id":"A141","pred":"tao:has_database_id","subj":"141","obj":"Tax:162013"},{"id":"A142","pred":"tao:has_database_id","subj":"142","obj":"Tax:10508"},{"id":"A143","pred":"tao:has_database_id","subj":"143","obj":"Tax:9408"},{"id":"A144","pred":"tao:has_database_id","subj":"144","obj":"Tax:11118"},{"id":"A145","pred":"tao:has_database_id","subj":"145","obj":"Tax:143291"},{"id":"A146","pred":"tao:has_database_id","subj":"146","obj":"Tax:143291"},{"id":"A147","pred":"tao:has_database_id","subj":"147","obj":"Tax:9408"},{"id":"A148","pred":"tao:has_database_id","subj":"148","obj":"MESH:C000657245"},{"id":"A149","pred":"tao:has_database_id","subj":"149","obj":"MESH:C000657245"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"India has a diverse population of bats; around 117 species of bats have been recorded, with around 100 subspecies coming under 39 genera belonging to eight families (Pteropodidae, Rhinolophidae, Hipposideridae, Megadermatidae, Rhinopomatidae, Emballonuridae, Molossidae and Vespertilionidae)12. The Indian Council of Medical Research-National Institute of Virology (ICMR-NIV) at Pune, India, has detected several viruses in bats, including the Nipah virus in Pteropus medius, Malsoor virus, Tioman virus and a novel adenovirus in Rousettus leschenaultii131415. Nipah viral RNA antibodies could be detected in Pteropus bats from many States of India, and the possible link of transmission from bats could be established during the Nipah outbreak which occurred in Kerala in 2018 and 20191617. The use of conventional polymerase chain reaction/reverse transcription-polymerase chain reaction (PCR/RT-PCR), as well as metagenomics and next-generation sequencing (NGS) technologies, has led to the discovery of many novel viruses in bats. The identification of new CoVs in bats in several neighbouring Asian countries such as China3, Sri Lanka18 and Singapore1920 and the growing threats of novel CoV diseases such as COVID-19 led us to investigate Pteropus and Rousettus bats commonly found in India, for identification and characterization of BtCoVs."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T20","span":{"begin":1214,"end":1222},"obj":"Disease"}],"attributes":[{"id":"A20","pred":"mondo_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"India has a diverse population of bats; around 117 species of bats have been recorded, with around 100 subspecies coming under 39 genera belonging to eight families (Pteropodidae, Rhinolophidae, Hipposideridae, Megadermatidae, Rhinopomatidae, Emballonuridae, Molossidae and Vespertilionidae)12. The Indian Council of Medical Research-National Institute of Virology (ICMR-NIV) at Pune, India, has detected several viruses in bats, including the Nipah virus in Pteropus medius, Malsoor virus, Tioman virus and a novel adenovirus in Rousettus leschenaultii131415. Nipah viral RNA antibodies could be detected in Pteropus bats from many States of India, and the possible link of transmission from bats could be established during the Nipah outbreak which occurred in Kerala in 2018 and 20191617. The use of conventional polymerase chain reaction/reverse transcription-polymerase chain reaction (PCR/RT-PCR), as well as metagenomics and next-generation sequencing (NGS) technologies, has led to the discovery of many novel viruses in bats. The identification of new CoVs in bats in several neighbouring Asian countries such as China3, Sri Lanka18 and Singapore1920 and the growing threats of novel CoV diseases such as COVID-19 led us to investigate Pteropus and Rousettus bats commonly found in India, for identification and characterization of BtCoVs."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T63","span":{"begin":6,"end":9},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T64","span":{"begin":10,"end":11},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T65","span":{"begin":34,"end":38},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T66","span":{"begin":62,"end":66},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T67","span":{"begin":259,"end":269},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9436"},{"id":"T68","span":{"begin":392,"end":395},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T69","span":{"begin":413,"end":420},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T70","span":{"begin":424,"end":428},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T71","span":{"begin":450,"end":455},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T72","span":{"begin":484,"end":489},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T73","span":{"begin":498,"end":503},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T74","span":{"begin":508,"end":509},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T75","span":{"begin":618,"end":622},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T76","span":{"begin":693,"end":697},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T77","span":{"begin":773,"end":777},"obj":"http://purl.obolibrary.org/obo/CLO_0001185"},{"id":"T78","span":{"begin":979,"end":982},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T79","span":{"begin":1018,"end":1025},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T80","span":{"begin":1029,"end":1033},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T81","span":{"begin":1069,"end":1073},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T82","span":{"begin":1268,"end":1272},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"}],"text":"India has a diverse population of bats; around 117 species of bats have been recorded, with around 100 subspecies coming under 39 genera belonging to eight families (Pteropodidae, Rhinolophidae, Hipposideridae, Megadermatidae, Rhinopomatidae, Emballonuridae, Molossidae and Vespertilionidae)12. The Indian Council of Medical Research-National Institute of Virology (ICMR-NIV) at Pune, India, has detected several viruses in bats, including the Nipah virus in Pteropus medius, Malsoor virus, Tioman virus and a novel adenovirus in Rousettus leschenaultii131415. Nipah viral RNA antibodies could be detected in Pteropus bats from many States of India, and the possible link of transmission from bats could be established during the Nipah outbreak which occurred in Kerala in 2018 and 20191617. The use of conventional polymerase chain reaction/reverse transcription-polymerase chain reaction (PCR/RT-PCR), as well as metagenomics and next-generation sequencing (NGS) technologies, has led to the discovery of many novel viruses in bats. The identification of new CoVs in bats in several neighbouring Asian countries such as China3, Sri Lanka18 and Singapore1920 and the growing threats of novel CoV diseases such as COVID-19 led us to investigate Pteropus and Rousettus bats commonly found in India, for identification and characterization of BtCoVs."}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T3","span":{"begin":842,"end":863},"obj":"http://purl.obolibrary.org/obo/GO_0001171"},{"id":"T4","span":{"begin":850,"end":863},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"India has a diverse population of bats; around 117 species of bats have been recorded, with around 100 subspecies coming under 39 genera belonging to eight families (Pteropodidae, Rhinolophidae, Hipposideridae, Megadermatidae, Rhinopomatidae, Emballonuridae, Molossidae and Vespertilionidae)12. The Indian Council of Medical Research-National Institute of Virology (ICMR-NIV) at Pune, India, has detected several viruses in bats, including the Nipah virus in Pteropus medius, Malsoor virus, Tioman virus and a novel adenovirus in Rousettus leschenaultii131415. Nipah viral RNA antibodies could be detected in Pteropus bats from many States of India, and the possible link of transmission from bats could be established during the Nipah outbreak which occurred in Kerala in 2018 and 20191617. The use of conventional polymerase chain reaction/reverse transcription-polymerase chain reaction (PCR/RT-PCR), as well as metagenomics and next-generation sequencing (NGS) technologies, has led to the discovery of many novel viruses in bats. The identification of new CoVs in bats in several neighbouring Asian countries such as China3, Sri Lanka18 and Singapore1920 and the growing threats of novel CoV diseases such as COVID-19 led us to investigate Pteropus and Rousettus bats commonly found in India, for identification and characterization of BtCoVs."}

{"project":"LitCovid-sentences","denotations":[{"id":"T39","span":{"begin":0,"end":294},"obj":"Sentence"},{"id":"T40","span":{"begin":295,"end":560},"obj":"Sentence"},{"id":"T41","span":{"begin":561,"end":791},"obj":"Sentence"},{"id":"T42","span":{"begin":792,"end":1034},"obj":"Sentence"},{"id":"T43","span":{"begin":1035,"end":1348},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"India has a diverse population of bats; around 117 species of bats have been recorded, with around 100 subspecies coming under 39 genera belonging to eight families (Pteropodidae, Rhinolophidae, Hipposideridae, Megadermatidae, Rhinopomatidae, Emballonuridae, Molossidae and Vespertilionidae)12. The Indian Council of Medical Research-National Institute of Virology (ICMR-NIV) at Pune, India, has detected several viruses in bats, including the Nipah virus in Pteropus medius, Malsoor virus, Tioman virus and a novel adenovirus in Rousettus leschenaultii131415. Nipah viral RNA antibodies could be detected in Pteropus bats from many States of India, and the possible link of transmission from bats could be established during the Nipah outbreak which occurred in Kerala in 2018 and 20191617. The use of conventional polymerase chain reaction/reverse transcription-polymerase chain reaction (PCR/RT-PCR), as well as metagenomics and next-generation sequencing (NGS) technologies, has led to the discovery of many novel viruses in bats. The identification of new CoVs in bats in several neighbouring Asian countries such as China3, Sri Lanka18 and Singapore1920 and the growing threats of novel CoV diseases such as COVID-19 led us to investigate Pteropus and Rousettus bats commonly found in India, for identification and characterization of BtCoVs."}

{"project":"Zoonoses_partialAnnotation","denotations":[{"id":"T145","span":{"begin":763,"end":769},"obj":"Area"}],"attributes":[{"id":"A12","pred":"Memo","subj":"T145","obj":"MESH:D007194"}],"text":"India has a diverse population of bats; around 117 species of bats have been recorded, with around 100 subspecies coming under 39 genera belonging to eight families (Pteropodidae, Rhinolophidae, Hipposideridae, Megadermatidae, Rhinopomatidae, Emballonuridae, Molossidae and Vespertilionidae)12. The Indian Council of Medical Research-National Institute of Virology (ICMR-NIV) at Pune, India, has detected several viruses in bats, including the Nipah virus in Pteropus medius, Malsoor virus, Tioman virus and a novel adenovirus in Rousettus leschenaultii131415. Nipah viral RNA antibodies could be detected in Pteropus bats from many States of India, and the possible link of transmission from bats could be established during the Nipah outbreak which occurred in Kerala in 2018 and 20191617. The use of conventional polymerase chain reaction/reverse transcription-polymerase chain reaction (PCR/RT-PCR), as well as metagenomics and next-generation sequencing (NGS) technologies, has led to the discovery of many novel viruses in bats. The identification of new CoVs in bats in several neighbouring Asian countries such as China3, Sri Lanka18 and Singapore1920 and the growing threats of novel CoV diseases such as COVID-19 led us to investigate Pteropus and Rousettus bats commonly found in India, for identification and characterization of BtCoVs."}