PMC:7366549 / 23060-23690
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7366549","sourcedb":"PMC","sourceid":"7366549","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7366549","text":"The phylogenetic analysis for the partial RdRp region revealed the presence of distinct BtCoVs in both the bats. The genomic sequences retrieved from the Indian sequences form a distinct cluster. The three CoV_BtRtBetaCoV/GX2018 sequences retrieved from the Indian Rousettus bats were 5.8-6.7 per cent different from the reference sequence, which was retrieved from Rhinolophus affinis. The two CoV_BtRtBetaCoV/GX2018 sequences retrieved from different bats were 1.2 per cent different from each other. The effect of host influence on the nt usage of the virus cannot be denied; however, it needs to be explored further in detail.","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T112","span":{"begin":539,"end":541},"obj":"Body_part"}],"attributes":[{"id":"A112","pred":"fma_id","subj":"T112","obj":"http://purl.org/sig/ont/fma/fma82740"},{"subj":"T112","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"321","span":{"begin":366,"end":385},"obj":"Species"},{"id":"322","span":{"begin":265,"end":274},"obj":"Species"},{"id":"323","span":{"begin":539,"end":541},"obj":"Chemical"}],"attributes":[{"id":"A321","pred":"tao:has_database_id","subj":"321","obj":"Tax:59477"},{"id":"A322","pred":"tao:has_database_id","subj":"322","obj":"Tax:9408"},{"id":"A323","pred":"tao:has_database_id","subj":"323","obj":"MESH:D009711"},{"subj":"321","pred":"source","obj":"LitCovid-PubTator"},{"subj":"322","pred":"source","obj":"LitCovid-PubTator"},{"subj":"323","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T256","span":{"begin":107,"end":111},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T257","span":{"begin":176,"end":177},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T258","span":{"begin":275,"end":279},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T259","span":{"begin":453,"end":457},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T260","span":{"begin":555,"end":560},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"}],"attributes":[{"subj":"T256","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T257","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T258","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T259","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T260","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T64","span":{"begin":539,"end":541},"obj":"Chemical"}],"attributes":[{"id":"A64","pred":"chebi_id","subj":"T64","obj":"http://purl.obolibrary.org/obo/CHEBI_36976"},{"subj":"T64","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T201","span":{"begin":0,"end":112},"obj":"Sentence"},{"id":"T202","span":{"begin":113,"end":195},"obj":"Sentence"},{"id":"T203","span":{"begin":196,"end":386},"obj":"Sentence"},{"id":"T204","span":{"begin":387,"end":502},"obj":"Sentence"},{"id":"T205","span":{"begin":503,"end":630},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T201","pred":"source","obj":"LitCovid-sentences"},{"subj":"T202","pred":"source","obj":"LitCovid-sentences"},{"subj":"T203","pred":"source","obj":"LitCovid-sentences"},{"subj":"T204","pred":"source","obj":"LitCovid-sentences"},{"subj":"T205","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#ceec93","default":true},{"id":"LitCovid-PubTator","color":"#ec93e8"},{"id":"LitCovid-PD-CLO","color":"#93ecd6"},{"id":"LitCovid-PD-CHEBI","color":"#ecbc93"},{"id":"LitCovid-sentences","color":"#a293ec"}]}]}}