PMC:7366549 / 16696-17077 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T84","span":{"begin":93,"end":99},"obj":"Body_part"},{"id":"T85","span":{"begin":110,"end":113},"obj":"Body_part"},{"id":"T86","span":{"begin":125,"end":131},"obj":"Body_part"},{"id":"T87","span":{"begin":185,"end":194},"obj":"Body_part"},{"id":"T88","span":{"begin":229,"end":232},"obj":"Body_part"},{"id":"T89","span":{"begin":312,"end":321},"obj":"Body_part"}],"attributes":[{"id":"A84","pred":"fma_id","subj":"T84","obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"A85","pred":"fma_id","subj":"T85","obj":"http://purl.org/sig/ont/fma/fma305650"},{"id":"A86","pred":"fma_id","subj":"T86","obj":"http://purl.org/sig/ont/fma/fma7203"},{"id":"A87","pred":"fma_id","subj":"T87","obj":"http://purl.org/sig/ont/fma/fma7199"},{"id":"A88","pred":"fma_id","subj":"T88","obj":"http://purl.org/sig/ont/fma/fma305650"},{"id":"A89","pred":"fma_id","subj":"T89","obj":"http://purl.org/sig/ont/fma/fma7199"}],"text":"Sample details Sample type Virus retrieved Relevant reads Per cent of reads Per cent of genome recovered\nMCL-20-Bat-76 Kidney Coronavirus BtRt-BetaCoV/GX2018 1632 0.015 94.39\nIntestine BtCoV HKU9-1 4499 0.056 95.75\nMCL-19-Bat-606 Rectal swab Coronavirus BtRt-BetaCoV/GX2018 13,973 0.114 99.53\nIntestine Coronavirus BtRt-BetaCoV/GX2018 10,214,492 93.476 99.87"}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T26","span":{"begin":125,"end":131},"obj":"Body_part"},{"id":"T27","span":{"begin":185,"end":194},"obj":"Body_part"},{"id":"T28","span":{"begin":312,"end":321},"obj":"Body_part"}],"attributes":[{"id":"A26","pred":"uberon_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"A27","pred":"uberon_id","subj":"T27","obj":"http://purl.obolibrary.org/obo/UBERON_0000160"},{"id":"A28","pred":"uberon_id","subj":"T28","obj":"http://purl.obolibrary.org/obo/UBERON_0000160"}],"text":"Sample details Sample type Virus retrieved Relevant reads Per cent of reads Per cent of genome recovered\nMCL-20-Bat-76 Kidney Coronavirus BtRt-BetaCoV/GX2018 1632 0.015 94.39\nIntestine BtCoV HKU9-1 4499 0.056 95.75\nMCL-19-Bat-606 Rectal swab Coronavirus BtRt-BetaCoV/GX2018 13,973 0.114 99.53\nIntestine Coronavirus BtRt-BetaCoV/GX2018 10,214,492 93.476 99.87"}

{"project":"LitCovid-PubTator","denotations":[{"id":"239","span":{"begin":133,"end":164},"obj":"Species"},{"id":"240","span":{"begin":258,"end":289},"obj":"Species"},{"id":"241","span":{"begin":323,"end":354},"obj":"Species"}],"attributes":[{"id":"A239","pred":"tao:has_database_id","subj":"239","obj":"Tax:2591238"},{"id":"A240","pred":"tao:has_database_id","subj":"240","obj":"Tax:2591238"},{"id":"A241","pred":"tao:has_database_id","subj":"241","obj":"Tax:2591238"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Sample details Sample type Virus retrieved Relevant reads Per cent of reads Per cent of genome recovered\nMCL-20-Bat-76 Kidney Coronavirus BtRt-BetaCoV/GX2018 1632 0.015 94.39\nIntestine BtCoV HKU9-1 4499 0.056 95.75\nMCL-19-Bat-606 Rectal swab Coronavirus BtRt-BetaCoV/GX2018 13,973 0.114 99.53\nIntestine Coronavirus BtRt-BetaCoV/GX2018 10,214,492 93.476 99.87"}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T217","span":{"begin":29,"end":34},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T218","span":{"begin":62,"end":65},"obj":"http://purl.obolibrary.org/obo/CLO_0008190"},{"id":"T219","span":{"begin":81,"end":84},"obj":"http://purl.obolibrary.org/obo/CLO_0008190"},{"id":"T220","span":{"begin":125,"end":131},"obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"T221","span":{"begin":125,"end":131},"obj":"http://www.ebi.ac.uk/efo/EFO_0000927"},{"id":"T222","span":{"begin":125,"end":131},"obj":"http://www.ebi.ac.uk/efo/EFO_0000929"},{"id":"T223","span":{"begin":185,"end":194},"obj":"http://purl.obolibrary.org/obo/UBERON_0000160"},{"id":"T224","span":{"begin":185,"end":194},"obj":"http://www.ebi.ac.uk/efo/EFO_0000834"},{"id":"T225","span":{"begin":312,"end":321},"obj":"http://purl.obolibrary.org/obo/UBERON_0000160"},{"id":"T226","span":{"begin":312,"end":321},"obj":"http://www.ebi.ac.uk/efo/EFO_0000834"}],"text":"Sample details Sample type Virus retrieved Relevant reads Per cent of reads Per cent of genome recovered\nMCL-20-Bat-76 Kidney Coronavirus BtRt-BetaCoV/GX2018 1632 0.015 94.39\nIntestine BtCoV HKU9-1 4499 0.056 95.75\nMCL-19-Bat-606 Rectal swab Coronavirus BtRt-BetaCoV/GX2018 13,973 0.114 99.53\nIntestine Coronavirus BtRt-BetaCoV/GX2018 10,214,492 93.476 99.87"}

{"project":"LitCovid-sentences","denotations":[{"id":"T138","span":{"begin":0,"end":109},"obj":"Sentence"},{"id":"T139","span":{"begin":110,"end":184},"obj":"Sentence"},{"id":"T140","span":{"begin":185,"end":228},"obj":"Sentence"},{"id":"T141","span":{"begin":229,"end":311},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Sample details Sample type Virus retrieved Relevant reads Per cent of reads Per cent of genome recovered\nMCL-20-Bat-76 Kidney Coronavirus BtRt-BetaCoV/GX2018 1632 0.015 94.39\nIntestine BtCoV HKU9-1 4499 0.056 95.75\nMCL-19-Bat-606 Rectal swab Coronavirus BtRt-BetaCoV/GX2018 13,973 0.114 99.53\nIntestine Coronavirus BtRt-BetaCoV/GX2018 10,214,492 93.476 99.87"}