PMC:7366549 / 15337-15726 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T58","span":{"begin":90,"end":96},"obj":"Body_part"},{"id":"T59","span":{"begin":103,"end":113},"obj":"Body_part"},{"id":"T60","span":{"begin":114,"end":120},"obj":"Body_part"},{"id":"T61","span":{"begin":174,"end":180},"obj":"Body_part"},{"id":"T62","span":{"begin":195,"end":201},"obj":"Body_part"},{"id":"T63","span":{"begin":206,"end":215},"obj":"Body_part"},{"id":"T64","span":{"begin":216,"end":223},"obj":"Body_part"},{"id":"T65","span":{"begin":258,"end":261},"obj":"Body_part"},{"id":"T66","span":{"begin":291,"end":300},"obj":"Body_part"},{"id":"T67","span":{"begin":301,"end":307},"obj":"Body_part"},{"id":"T68","span":{"begin":335,"end":338},"obj":"Body_part"}],"attributes":[{"id":"A58","pred":"fma_id","subj":"T58","obj":"http://purl.org/sig/ont/fma/fma7203"},{"id":"A59","pred":"fma_id","subj":"T59","obj":"http://purl.org/sig/ont/fma/fma7199"},{"id":"A60","pred":"fma_id","subj":"T60","obj":"http://purl.org/sig/ont/fma/fma9637"},{"id":"A61","pred":"fma_id","subj":"T61","obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"A62","pred":"fma_id","subj":"T62","obj":"http://purl.org/sig/ont/fma/fma7203"},{"id":"A63","pred":"fma_id","subj":"T63","obj":"http://purl.org/sig/ont/fma/fma7199"},{"id":"A64","pred":"fma_id","subj":"T64","obj":"http://purl.org/sig/ont/fma/fma9637"},{"id":"A65","pred":"fma_id","subj":"T65","obj":"http://purl.org/sig/ont/fma/fma305650"},{"id":"A66","pred":"fma_id","subj":"T66","obj":"http://purl.org/sig/ont/fma/fma7199"},{"id":"A67","pred":"fma_id","subj":"T67","obj":"http://purl.org/sig/ont/fma/fma9637"},{"id":"A68","pred":"fma_id","subj":"T68","obj":"http://purl.org/sig/ont/fma/fma305650"}],"text":"Next-generation sequencing of bat coronavirus: NGS was performed on 10 specimens [4 RS, 2 kidney and 4 intestinal tissue) of the five Rousettus bats to retrieve the complete genome of the BtCoV. Kidney and intestine tissues of the bats from Karnataka State (MCL-20-Bat-76) and RS along with intestine tissue of bats from Kerala State (MCL-19-Bat-606) were used for sequencing and analysis."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T12","span":{"begin":90,"end":96},"obj":"Body_part"},{"id":"T13","span":{"begin":114,"end":120},"obj":"Body_part"},{"id":"T14","span":{"begin":195,"end":201},"obj":"Body_part"},{"id":"T15","span":{"begin":206,"end":215},"obj":"Body_part"},{"id":"T16","span":{"begin":291,"end":300},"obj":"Body_part"},{"id":"T17","span":{"begin":301,"end":307},"obj":"Body_part"}],"attributes":[{"id":"A12","pred":"uberon_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"A13","pred":"uberon_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/UBERON_0000479"},{"id":"A14","pred":"uberon_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"A15","pred":"uberon_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/UBERON_0000160"},{"id":"A16","pred":"uberon_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/UBERON_0000160"},{"id":"A17","pred":"uberon_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/UBERON_0000479"}],"text":"Next-generation sequencing of bat coronavirus: NGS was performed on 10 specimens [4 RS, 2 kidney and 4 intestinal tissue) of the five Rousettus bats to retrieve the complete genome of the BtCoV. Kidney and intestine tissues of the bats from Karnataka State (MCL-20-Bat-76) and RS along with intestine tissue of bats from Kerala State (MCL-19-Bat-606) were used for sequencing and analysis."}

{"project":"LitCovid-PubTator","denotations":[{"id":"222","span":{"begin":30,"end":45},"obj":"Species"},{"id":"223","span":{"begin":134,"end":143},"obj":"Species"}],"attributes":[{"id":"A222","pred":"tao:has_database_id","subj":"222","obj":"Tax:1508220"},{"id":"A223","pred":"tao:has_database_id","subj":"223","obj":"Tax:9408"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Next-generation sequencing of bat coronavirus: NGS was performed on 10 specimens [4 RS, 2 kidney and 4 intestinal tissue) of the five Rousettus bats to retrieve the complete genome of the BtCoV. Kidney and intestine tissues of the bats from Karnataka State (MCL-20-Bat-76) and RS along with intestine tissue of bats from Kerala State (MCL-19-Bat-606) were used for sequencing and analysis."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T46","span":{"begin":84,"end":86},"obj":"Disease"},{"id":"T47","span":{"begin":277,"end":279},"obj":"Disease"}],"attributes":[{"id":"A46","pred":"mondo_id","subj":"T46","obj":"http://purl.obolibrary.org/obo/MONDO_0010725"},{"id":"A47","pred":"mondo_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/MONDO_0010725"}],"text":"Next-generation sequencing of bat coronavirus: NGS was performed on 10 specimens [4 RS, 2 kidney and 4 intestinal tissue) of the five Rousettus bats to retrieve the complete genome of the BtCoV. Kidney and intestine tissues of the bats from Karnataka State (MCL-20-Bat-76) and RS along with intestine tissue of bats from Kerala State (MCL-19-Bat-606) were used for sequencing and analysis."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T179","span":{"begin":30,"end":33},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T180","span":{"begin":84,"end":86},"obj":"http://purl.obolibrary.org/obo/CLO_0008882"},{"id":"T181","span":{"begin":90,"end":96},"obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"T182","span":{"begin":90,"end":96},"obj":"http://www.ebi.ac.uk/efo/EFO_0000927"},{"id":"T183","span":{"begin":90,"end":96},"obj":"http://www.ebi.ac.uk/efo/EFO_0000929"},{"id":"T184","span":{"begin":103,"end":113},"obj":"http://purl.obolibrary.org/obo/UBERON_0000160"},{"id":"T185","span":{"begin":103,"end":113},"obj":"http://www.ebi.ac.uk/efo/EFO_0000834"},{"id":"T186","span":{"begin":144,"end":148},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T187","span":{"begin":195,"end":201},"obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"T188","span":{"begin":195,"end":201},"obj":"http://www.ebi.ac.uk/efo/EFO_0000927"},{"id":"T189","span":{"begin":195,"end":201},"obj":"http://www.ebi.ac.uk/efo/EFO_0000929"},{"id":"T190","span":{"begin":206,"end":215},"obj":"http://purl.obolibrary.org/obo/UBERON_0000160"},{"id":"T191","span":{"begin":206,"end":215},"obj":"http://www.ebi.ac.uk/efo/EFO_0000834"},{"id":"T192","span":{"begin":231,"end":235},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T193","span":{"begin":277,"end":279},"obj":"http://purl.obolibrary.org/obo/CLO_0008882"},{"id":"T194","span":{"begin":291,"end":300},"obj":"http://purl.obolibrary.org/obo/UBERON_0000160"},{"id":"T195","span":{"begin":291,"end":300},"obj":"http://www.ebi.ac.uk/efo/EFO_0000834"},{"id":"T196","span":{"begin":311,"end":315},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"}],"text":"Next-generation sequencing of bat coronavirus: NGS was performed on 10 specimens [4 RS, 2 kidney and 4 intestinal tissue) of the five Rousettus bats to retrieve the complete genome of the BtCoV. Kidney and intestine tissues of the bats from Karnataka State (MCL-20-Bat-76) and RS along with intestine tissue of bats from Kerala State (MCL-19-Bat-606) were used for sequencing and analysis."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T52","span":{"begin":84,"end":86},"obj":"Chemical"},{"id":"T53","span":{"begin":277,"end":279},"obj":"Chemical"}],"attributes":[{"id":"A52","pred":"chebi_id","subj":"T52","obj":"http://purl.obolibrary.org/obo/CHEBI_73819"},{"id":"A53","pred":"chebi_id","subj":"T53","obj":"http://purl.obolibrary.org/obo/CHEBI_73819"}],"text":"Next-generation sequencing of bat coronavirus: NGS was performed on 10 specimens [4 RS, 2 kidney and 4 intestinal tissue) of the five Rousettus bats to retrieve the complete genome of the BtCoV. Kidney and intestine tissues of the bats from Karnataka State (MCL-20-Bat-76) and RS along with intestine tissue of bats from Kerala State (MCL-19-Bat-606) were used for sequencing and analysis."}

{"project":"LitCovid-sentences","denotations":[{"id":"T130","span":{"begin":0,"end":194},"obj":"Sentence"},{"id":"T131","span":{"begin":195,"end":389},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Next-generation sequencing of bat coronavirus: NGS was performed on 10 specimens [4 RS, 2 kidney and 4 intestinal tissue) of the five Rousettus bats to retrieve the complete genome of the BtCoV. Kidney and intestine tissues of the bats from Karnataka State (MCL-20-Bat-76) and RS along with intestine tissue of bats from Kerala State (MCL-19-Bat-606) were used for sequencing and analysis."}

{"project":"Zoonoses_partialAnnotation","denotations":[{"id":"T141","span":{"begin":241,"end":250},"obj":"Area"},{"id":"T157","span":{"begin":321,"end":327},"obj":"Area"}],"attributes":[{"id":"A8","pred":"Memo","subj":"T141","obj":"MESH:D007194"},{"id":"A24","pred":"Memo","subj":"T157","obj":"MESH:D007194"}],"text":"Next-generation sequencing of bat coronavirus: NGS was performed on 10 specimens [4 RS, 2 kidney and 4 intestinal tissue) of the five Rousettus bats to retrieve the complete genome of the BtCoV. Kidney and intestine tissues of the bats from Karnataka State (MCL-20-Bat-76) and RS along with intestine tissue of bats from Kerala State (MCL-19-Bat-606) were used for sequencing and analysis."}