PMC:7366549 / 14644-15336 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"217","span":{"begin":391,"end":394},"obj":"Species"},{"id":"218","span":{"begin":643,"end":646},"obj":"Species"},{"id":"219","span":{"begin":96,"end":104},"obj":"Species"}],"attributes":[{"id":"A217","pred":"tao:has_database_id","subj":"217","obj":"Tax:11118"},{"id":"A218","pred":"tao:has_database_id","subj":"218","obj":"Tax:11118"},{"id":"A219","pred":"tao:has_database_id","subj":"219","obj":"Tax:143291"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Sanger's sequencing protocol led to retrieval of eight partial RdRp sequences which belonged to Pteropus spp. These bats were collected from Kerala (n=5) and Tamil Nadu (n=3) States. One of the three partial RdRp sequences from Tamil Nadu had 97.93 per cent SI with BtCoV/B55951/Pte_lyl/CB2-THA (AN: MG256459.1, Thailand). The other two sequences had a minimum of 99.48 per cent SI with the CoV PREDICT_CoV-17/PB072 (AN: KX284942.1, Nepal). One of the five partial RdRp sequences from Kerala had 98.88 per cent SI with BtCoV/B55951/Pte_lyl/CB2-THA (AN: MG256459.1, Thailand). The remaining four partial RdRp sequences had \u003e97 per cent SI with CoV PREDICT_CoV-17/PB072 (AN: KX284942.1, Nepal)."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T177","span":{"begin":116,"end":120},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T178","span":{"begin":351,"end":352},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"Sanger's sequencing protocol led to retrieval of eight partial RdRp sequences which belonged to Pteropus spp. These bats were collected from Kerala (n=5) and Tamil Nadu (n=3) States. One of the three partial RdRp sequences from Tamil Nadu had 97.93 per cent SI with BtCoV/B55951/Pte_lyl/CB2-THA (AN: MG256459.1, Thailand). The other two sequences had a minimum of 99.48 per cent SI with the CoV PREDICT_CoV-17/PB072 (AN: KX284942.1, Nepal). One of the five partial RdRp sequences from Kerala had 98.88 per cent SI with BtCoV/B55951/Pte_lyl/CB2-THA (AN: MG256459.1, Thailand). The remaining four partial RdRp sequences had \u003e97 per cent SI with CoV PREDICT_CoV-17/PB072 (AN: KX284942.1, Nepal)."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T44","span":{"begin":258,"end":260},"obj":"Chemical"},{"id":"T45","span":{"begin":291,"end":294},"obj":"Chemical"},{"id":"T47","span":{"begin":379,"end":381},"obj":"Chemical"},{"id":"T48","span":{"begin":511,"end":513},"obj":"Chemical"},{"id":"T49","span":{"begin":544,"end":547},"obj":"Chemical"},{"id":"T51","span":{"begin":635,"end":637},"obj":"Chemical"}],"attributes":[{"id":"A44","pred":"chebi_id","subj":"T44","obj":"http://purl.obolibrary.org/obo/CHEBI_90326"},{"id":"A45","pred":"chebi_id","subj":"T45","obj":"http://purl.obolibrary.org/obo/CHEBI_72714"},{"id":"A46","pred":"chebi_id","subj":"T45","obj":"http://purl.obolibrary.org/obo/CHEBI_77366"},{"id":"A47","pred":"chebi_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/CHEBI_90326"},{"id":"A48","pred":"chebi_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/CHEBI_90326"},{"id":"A49","pred":"chebi_id","subj":"T49","obj":"http://purl.obolibrary.org/obo/CHEBI_72714"},{"id":"A50","pred":"chebi_id","subj":"T49","obj":"http://purl.obolibrary.org/obo/CHEBI_77366"},{"id":"A51","pred":"chebi_id","subj":"T51","obj":"http://purl.obolibrary.org/obo/CHEBI_90326"}],"text":"Sanger's sequencing protocol led to retrieval of eight partial RdRp sequences which belonged to Pteropus spp. These bats were collected from Kerala (n=5) and Tamil Nadu (n=3) States. One of the three partial RdRp sequences from Tamil Nadu had 97.93 per cent SI with BtCoV/B55951/Pte_lyl/CB2-THA (AN: MG256459.1, Thailand). The other two sequences had a minimum of 99.48 per cent SI with the CoV PREDICT_CoV-17/PB072 (AN: KX284942.1, Nepal). One of the five partial RdRp sequences from Kerala had 98.88 per cent SI with BtCoV/B55951/Pte_lyl/CB2-THA (AN: MG256459.1, Thailand). The remaining four partial RdRp sequences had \u003e97 per cent SI with CoV PREDICT_CoV-17/PB072 (AN: KX284942.1, Nepal)."}

{"project":"LitCovid-sentences","denotations":[{"id":"T124","span":{"begin":0,"end":109},"obj":"Sentence"},{"id":"T125","span":{"begin":110,"end":182},"obj":"Sentence"},{"id":"T126","span":{"begin":183,"end":322},"obj":"Sentence"},{"id":"T127","span":{"begin":323,"end":440},"obj":"Sentence"},{"id":"T128","span":{"begin":441,"end":575},"obj":"Sentence"},{"id":"T129","span":{"begin":576,"end":692},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Sanger's sequencing protocol led to retrieval of eight partial RdRp sequences which belonged to Pteropus spp. These bats were collected from Kerala (n=5) and Tamil Nadu (n=3) States. One of the three partial RdRp sequences from Tamil Nadu had 97.93 per cent SI with BtCoV/B55951/Pte_lyl/CB2-THA (AN: MG256459.1, Thailand). The other two sequences had a minimum of 99.48 per cent SI with the CoV PREDICT_CoV-17/PB072 (AN: KX284942.1, Nepal). One of the five partial RdRp sequences from Kerala had 98.88 per cent SI with BtCoV/B55951/Pte_lyl/CB2-THA (AN: MG256459.1, Thailand). The remaining four partial RdRp sequences had \u003e97 per cent SI with CoV PREDICT_CoV-17/PB072 (AN: KX284942.1, Nepal)."}

{"project":"Zoonoses_partialAnnotation","denotations":[{"id":"T155","span":{"begin":141,"end":147},"obj":"Area"},{"id":"T156","span":{"begin":485,"end":491},"obj":"Area"},{"id":"T166","span":{"begin":158,"end":168},"obj":"Area"},{"id":"T167","span":{"begin":228,"end":238},"obj":"Area"}],"attributes":[{"id":"A22","pred":"Memo","subj":"T155","obj":"MESH:D007194"},{"id":"A23","pred":"Memo","subj":"T156","obj":"MESH:D007194"},{"id":"A33","pred":"Memo","subj":"T166","obj":"MESH:D007194"},{"id":"A34","pred":"Memo","subj":"T167","obj":"MESH:D007194"}],"text":"Sanger's sequencing protocol led to retrieval of eight partial RdRp sequences which belonged to Pteropus spp. These bats were collected from Kerala (n=5) and Tamil Nadu (n=3) States. One of the three partial RdRp sequences from Tamil Nadu had 97.93 per cent SI with BtCoV/B55951/Pte_lyl/CB2-THA (AN: MG256459.1, Thailand). The other two sequences had a minimum of 99.48 per cent SI with the CoV PREDICT_CoV-17/PB072 (AN: KX284942.1, Nepal). One of the five partial RdRp sequences from Kerala had 98.88 per cent SI with BtCoV/B55951/Pte_lyl/CB2-THA (AN: MG256459.1, Thailand). The remaining four partial RdRp sequences had \u003e97 per cent SI with CoV PREDICT_CoV-17/PB072 (AN: KX284942.1, Nepal)."}