PMC:7366549 / 14194-14643 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T56","span":{"begin":203,"end":206},"obj":"Body_part"},{"id":"T57","span":{"begin":352,"end":355},"obj":"Body_part"}],"attributes":[{"id":"A56","pred":"fma_id","subj":"T56","obj":"http://purl.org/sig/ont/fma/fma305650"},{"id":"A57","pred":"fma_id","subj":"T57","obj":"http://purl.org/sig/ont/fma/fma305650"}],"text":"Sanger sequencing of bat coronavirus: Using the Sanger sequencing protocol, partial RdRp sequences of BtCoV were retrieved from two (out of 4 amplicons) specimens of Rousettus spp. One of the sequences (MCL-19-bat-588/2) showed close identity to BtCoV HKU9-5-2 (AN): HM211099.1; sequence identity (SI): 99.2 per cent, whereas the second RdRp sequence (MCL-20-bat-76/10) had an SI of 98.8 per cent with BtCoV HKU9-1 (AN: EF065513.1), both from China."}

{"project":"LitCovid-PubTator","denotations":[{"id":"212","span":{"begin":21,"end":36},"obj":"Species"},{"id":"213","span":{"begin":166,"end":175},"obj":"Species"}],"attributes":[{"id":"A212","pred":"tao:has_database_id","subj":"212","obj":"Tax:1508220"},{"id":"A213","pred":"tao:has_database_id","subj":"213","obj":"Tax:9408"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Sanger sequencing of bat coronavirus: Using the Sanger sequencing protocol, partial RdRp sequences of BtCoV were retrieved from two (out of 4 amplicons) specimens of Rousettus spp. One of the sequences (MCL-19-bat-588/2) showed close identity to BtCoV HKU9-5-2 (AN): HM211099.1; sequence identity (SI): 99.2 per cent, whereas the second RdRp sequence (MCL-20-bat-76/10) had an SI of 98.8 per cent with BtCoV HKU9-1 (AN: EF065513.1), both from China."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T173","span":{"begin":21,"end":24},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T174","span":{"begin":210,"end":213},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T175","span":{"begin":257,"end":260},"obj":"http://purl.obolibrary.org/obo/CLO_0001407"},{"id":"T176","span":{"begin":359,"end":362},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"}],"text":"Sanger sequencing of bat coronavirus: Using the Sanger sequencing protocol, partial RdRp sequences of BtCoV were retrieved from two (out of 4 amplicons) specimens of Rousettus spp. One of the sequences (MCL-19-bat-588/2) showed close identity to BtCoV HKU9-5-2 (AN): HM211099.1; sequence identity (SI): 99.2 per cent, whereas the second RdRp sequence (MCL-20-bat-76/10) had an SI of 98.8 per cent with BtCoV HKU9-1 (AN: EF065513.1), both from China."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T42","span":{"begin":298,"end":300},"obj":"Chemical"},{"id":"T43","span":{"begin":377,"end":379},"obj":"Chemical"}],"attributes":[{"id":"A42","pred":"chebi_id","subj":"T42","obj":"http://purl.obolibrary.org/obo/CHEBI_90326"},{"id":"A43","pred":"chebi_id","subj":"T43","obj":"http://purl.obolibrary.org/obo/CHEBI_90326"}],"text":"Sanger sequencing of bat coronavirus: Using the Sanger sequencing protocol, partial RdRp sequences of BtCoV were retrieved from two (out of 4 amplicons) specimens of Rousettus spp. One of the sequences (MCL-19-bat-588/2) showed close identity to BtCoV HKU9-5-2 (AN): HM211099.1; sequence identity (SI): 99.2 per cent, whereas the second RdRp sequence (MCL-20-bat-76/10) had an SI of 98.8 per cent with BtCoV HKU9-1 (AN: EF065513.1), both from China."}

{"project":"LitCovid-sentences","denotations":[{"id":"T120","span":{"begin":0,"end":37},"obj":"Sentence"},{"id":"T121","span":{"begin":38,"end":180},"obj":"Sentence"},{"id":"T122","span":{"begin":181,"end":302},"obj":"Sentence"},{"id":"T123","span":{"begin":303,"end":449},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Sanger sequencing of bat coronavirus: Using the Sanger sequencing protocol, partial RdRp sequences of BtCoV were retrieved from two (out of 4 amplicons) specimens of Rousettus spp. One of the sequences (MCL-19-bat-588/2) showed close identity to BtCoV HKU9-5-2 (AN): HM211099.1; sequence identity (SI): 99.2 per cent, whereas the second RdRp sequence (MCL-20-bat-76/10) had an SI of 98.8 per cent with BtCoV HKU9-1 (AN: EF065513.1), both from China."}

{"project":"Zoonoses_partialAnnotation","denotations":[{"id":"T235","span":{"begin":166,"end":180},"obj":"Species"}],"attributes":[{"id":"A91","pred":"Memo","subj":"T235","obj":"Tax:2640345"}],"text":"Sanger sequencing of bat coronavirus: Using the Sanger sequencing protocol, partial RdRp sequences of BtCoV were retrieved from two (out of 4 amplicons) specimens of Rousettus spp. One of the sequences (MCL-19-bat-588/2) showed close identity to BtCoV HKU9-5-2 (AN): HM211099.1; sequence identity (SI): 99.2 per cent, whereas the second RdRp sequence (MCL-20-bat-76/10) had an SI of 98.8 per cent with BtCoV HKU9-1 (AN: EF065513.1), both from China."}