PMC:7361216 / 6042-6719
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T76 | 54-67 | Body_part | denotes | carbohydrates | http://purl.org/sig/ont/fma/fma82737 |
| T77 | 328-341 | Body_part | denotes | carbohydrates | http://purl.org/sig/ont/fma/fma82737 |
| T78 | 415-428 | Body_part | denotes | carbohydrates | http://purl.org/sig/ont/fma/fma82737 |
| T79 | 543-546 | Body_part | denotes | IgM | http://purl.org/sig/ont/fma/fma62873 |
| T80 | 630-643 | Body_part | denotes | carbohydrates | http://purl.org/sig/ont/fma/fma82737 |
| T81 | 657-664 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T13 | 129-139 | Disease | denotes | neuropathy | http://purl.obolibrary.org/obo/MONDO_0005244 |
| T14 | 210-216 | Disease | denotes | ataxia | http://purl.obolibrary.org/obo/MONDO_0000437 |
| T15 | 484-492 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T16 | 547-557 | Disease | denotes | neuropathy | http://purl.obolibrary.org/obo/MONDO_0005244 |
| T17 | 668-676 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T85 | 72-73 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T86 | 218-219 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T87 | 345-346 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T88 | 434-435 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T89 | 579-580 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T42 | 54-67 | Chemical | denotes | carbohydrates | http://purl.obolibrary.org/obo/CHEBI_16646 |
| T43 | 84-91 | Chemical | denotes | antigen | http://purl.obolibrary.org/obo/CHEBI_59132 |
| T44 | 328-341 | Chemical | denotes | carbohydrates | http://purl.obolibrary.org/obo/CHEBI_16646 |
| T45 | 415-428 | Chemical | denotes | carbohydrates | http://purl.obolibrary.org/obo/CHEBI_16646 |
| T46 | 630-643 | Chemical | denotes | carbohydrates | http://purl.obolibrary.org/obo/CHEBI_16646 |
| T47 | 657-664 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sample-PD-IDO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26 | 347-354 | http://purl.obolibrary.org/obo/OGMS_0000031 | denotes | disease |
| T27 | 392-400 | http://purl.obolibrary.org/obo/OGMS_0000031 | denotes | diseases |
LitCovid-sample-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T38 | 54-67 | Chemical | denotes | carbohydrates | http://purl.obolibrary.org/obo/CHEBI_16646 |
| T39 | 328-341 | Chemical | denotes | carbohydrates | http://purl.obolibrary.org/obo/CHEBI_16646 |
| T40 | 415-428 | Chemical | denotes | carbohydrates | http://purl.obolibrary.org/obo/CHEBI_16646 |
| T41 | 630-643 | Chemical | denotes | carbohydrates | http://purl.obolibrary.org/obo/CHEBI_16646 |
| T42 | 657-664 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sample-PD-NCBITaxon
| Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
|---|---|---|---|---|---|
| T18 | 484-492 | Species | denotes | COVID‐19 | NCBItxid:2697049 |
| T19 | 668-676 | Species | denotes | COVID‐19 | NCBItxid:2697049 |
LitCovid-sample-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T38 | 0-284 | Sentence | denotes | Writing about these exquisite approaches to targeting carbohydrates for a potential antigen‐specific therapy for an inflammatory neuropathy characterized by sensory impairment, disturbance in gait, tremor, and ataxia (a form of incoordination following sensory loss) makes one wonder: |
| T39 | 285-462 | Sentence | denotes | Could such an approach, targeting critical carbohydrates in a disease, have broader applicability to other diseases where complex carbohydrates play a key pathophysiologic role? |
| T40 | 463-677 | Sentence | denotes | In these days of the COVID‐19 pandemic, the experiments described on monoclonal IgM neuropathy raise the issue that a similar strategy might be deployed to target the carbohydrates in the spike protein of COVID‐19. |
LitCovid-sample-Pubtator
| Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
|---|---|---|---|---|---|
| 166 | 54-67 | Chemical | denotes | carbohydrates | MESH:D002241 |
| 170 | 129-139 | Disease | denotes | neuropathy | MESH:D009422 |
| 171 | 157-175 | Disease | denotes | sensory impairment | MESH:D012678 |
| 172 | 198-204 | Disease | denotes | tremor | MESH:D014202 |
| 173 | 210-216 | Disease | denotes | ataxia | MESH:D001259 |
| 174 | 228-242 | Disease | denotes | incoordination | MESH:D001259 |
| 167 | 328-341 | Chemical | denotes | carbohydrates | MESH:D002241 |
| 168 | 415-428 | Chemical | denotes | carbohydrates | MESH:D002241 |
| 175 | 484-492 | Disease | denotes | COVID‐19 | MESH:C000657245 |
| 176 | 543-557 | Disease | denotes | IgM neuropathy | MESH:D053306 |
| 169 | 630-643 | Chemical | denotes | carbohydrates | MESH:D002241 |
| 165 | 651-656 | Gene | denotes | spike | Gene:43740568 |
| 177 | 668-676 | Disease | denotes | COVID‐19 | MESH:C000657245 |
LitCovid-sample-UniProt
| Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
|---|---|---|---|---|---|
| T69 | 651-664 | Protein | denotes | spike protein | https://www.uniprot.org/uniprot/P31340 |
LitCovid-sample-PD-FMA
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T76 | 54-67 | Body_part | denotes | carbohydrates | http://purl.org/sig/ont/fma/fma82737 |
| T77 | 328-341 | Body_part | denotes | carbohydrates | http://purl.org/sig/ont/fma/fma82737 |
| T78 | 415-428 | Body_part | denotes | carbohydrates | http://purl.org/sig/ont/fma/fma82737 |
| T79 | 543-546 | Body_part | denotes | IgM | http://purl.org/sig/ont/fma/fma62873 |
| T80 | 630-643 | Body_part | denotes | carbohydrates | http://purl.org/sig/ont/fma/fma82737 |
| T81 | 657-664 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-sample-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T16 | 129-139 | Disease | denotes | neuropathy | http://purl.obolibrary.org/obo/MONDO_0005244 |
| T17 | 210-216 | Disease | denotes | ataxia | http://purl.obolibrary.org/obo/MONDO_0000437 |
| T18 | 484-492 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T19 | 547-557 | Disease | denotes | neuropathy | http://purl.obolibrary.org/obo/MONDO_0005244 |
| T20 | 668-676 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-sample-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T6 | 129-139 | Phenotype | denotes | neuropathy | http://purl.obolibrary.org/obo/HP_0009830 |
| T7 | 157-175 | Phenotype | denotes | sensory impairment | http://purl.obolibrary.org/obo/HP_0003474 |
| T8 | 177-196 | Phenotype | denotes | disturbance in gait | http://purl.obolibrary.org/obo/HP_0001288 |
| T9 | 198-204 | Phenotype | denotes | tremor | http://purl.obolibrary.org/obo/HP_0001337 |
| T10 | 210-216 | Phenotype | denotes | ataxia | http://purl.obolibrary.org/obo/HP_0001251 |
| T11 | 228-242 | Phenotype | denotes | incoordination | http://purl.obolibrary.org/obo/HP_0002311 |
| T12 | 253-265 | Phenotype | denotes | sensory loss | http://purl.obolibrary.org/obo/HP_0003474 |
| T13 | 547-557 | Phenotype | denotes | neuropathy | http://purl.obolibrary.org/obo/HP_0009830 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T6 | 129-139 | Phenotype | denotes | neuropathy | http://purl.obolibrary.org/obo/HP_0009830 |
| T7 | 157-175 | Phenotype | denotes | sensory impairment | http://purl.obolibrary.org/obo/HP_0003474 |
| T8 | 177-196 | Phenotype | denotes | disturbance in gait | http://purl.obolibrary.org/obo/HP_0001288 |
| T9 | 198-204 | Phenotype | denotes | tremor | http://purl.obolibrary.org/obo/HP_0001337 |
| T10 | 210-216 | Phenotype | denotes | ataxia | http://purl.obolibrary.org/obo/HP_0001251 |
| T11 | 228-242 | Phenotype | denotes | incoordination | http://purl.obolibrary.org/obo/HP_0002311 |
| T12 | 253-265 | Phenotype | denotes | sensory loss | http://purl.obolibrary.org/obo/HP_0003474 |
| T13 | 547-557 | Phenotype | denotes | neuropathy | http://purl.obolibrary.org/obo/HP_0009830 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T38 | 0-284 | Sentence | denotes | Writing about these exquisite approaches to targeting carbohydrates for a potential antigen‐specific therapy for an inflammatory neuropathy characterized by sensory impairment, disturbance in gait, tremor, and ataxia (a form of incoordination following sensory loss) makes one wonder: |
| T39 | 285-462 | Sentence | denotes | Could such an approach, targeting critical carbohydrates in a disease, have broader applicability to other diseases where complex carbohydrates play a key pathophysiologic role? |
| T40 | 463-677 | Sentence | denotes | In these days of the COVID‐19 pandemic, the experiments described on monoclonal IgM neuropathy raise the issue that a similar strategy might be deployed to target the carbohydrates in the spike protein of COVID‐19. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 165 | 651-656 | Gene | denotes | spike | Gene:43740568 |
| 166 | 54-67 | Chemical | denotes | carbohydrates | MESH:D002241 |
| 167 | 328-341 | Chemical | denotes | carbohydrates | MESH:D002241 |
| 168 | 415-428 | Chemical | denotes | carbohydrates | MESH:D002241 |
| 169 | 630-643 | Chemical | denotes | carbohydrates | MESH:D002241 |
| 170 | 129-139 | Disease | denotes | neuropathy | MESH:D009422 |
| 171 | 157-175 | Disease | denotes | sensory impairment | MESH:D012678 |
| 172 | 198-204 | Disease | denotes | tremor | MESH:D014202 |
| 173 | 210-216 | Disease | denotes | ataxia | MESH:D001259 |
| 174 | 228-242 | Disease | denotes | incoordination | MESH:D001259 |
| 175 | 484-492 | Disease | denotes | COVID‐19 | MESH:C000657245 |
| 176 | 543-557 | Disease | denotes | IgM neuropathy | MESH:D053306 |
| 177 | 668-676 | Disease | denotes | COVID‐19 | MESH:C000657245 |