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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T296 100-114 Body_part denotes polysaccharide http://purl.org/sig/ont/fma/fma82746
T297 175-180 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T298 194-202 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T299 221-225 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T300 433-447 Body_part denotes polysaccharide http://purl.org/sig/ont/fma/fma82746
T301 573-588 Body_part denotes polysaccharides http://purl.org/sig/ont/fma/fma82746
T302 857-861 Body_part denotes foot http://purl.org/sig/ont/fma/fma9664
T303 866-871 Body_part denotes mouth http://purl.org/sig/ont/fma/fma49184
T304 906-909 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T305 1021-1024 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T306 1078-1081 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T307 1104-1119 Body_part denotes dendritic cells http://purl.org/sig/ont/fma/fma273565
T308 1114-1119 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T309 1147-1165 Body_part denotes regulatory T cells http://purl.org/sig/ont/fma/fma84070
T310 1160-1165 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T311 1183-1197 Body_part denotes Polysaccharide http://purl.org/sig/ont/fma/fma82746
T312 1346-1361 Body_part denotes polysaccharides http://purl.org/sig/ont/fma/fma82746
T313 1424-1433 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T314 1435-1437 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T315 1468-1475 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T316 1516-1530 Body_part denotes polysaccharide http://purl.org/sig/ont/fma/fma82746

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T18 175-180 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T19 221-225 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T20 857-861 Body_part denotes foot http://purl.obolibrary.org/obo/UBERON_0002387
T21 866-871 Body_part denotes mouth http://purl.obolibrary.org/obo/UBERON_0000165

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1076 9-17 Species denotes SARS-CoV Tax:694009
1077 379-390 Species denotes coronavirus Tax:11118
1078 503-514 Species denotes coronavirus Tax:11118
1079 770-774 Species denotes H5N1 Tax:102793
1080 857-885 Species denotes foot-and-mouth disease virus Tax:12110
1081 887-891 Species denotes FMDV Tax:12110
1082 963-967 Species denotes FMDV Tax:12110
1083 1254-1259 Species denotes human Tax:9606
1084 1269-1286 Species denotes influenza viruses Tax:11308
1085 1288-1292 Species denotes H1N1 Tax:114727
1086 1297-1301 Species denotes H3N2 Tax:119210
1087 1321-1325 Species denotes H9N2 Tax:102796
1088 687-696 Species denotes influenza Tax:11320
1089 1074-1077 Species denotes HBV Tax:10407
1090 1233-1236 Species denotes IAV Tax:11320
1091 1307-1310 Species denotes AIV Tax:11309
1092 1644-1647 Species denotes IAV Tax:11320
1093 81-123 Chemical denotes delta inulin-based polysaccharide adjuvant
1094 282-304 Chemical denotes delta inulin adjuvants
1095 573-588 Chemical denotes polysaccharides MESH:D011134
1096 654-657 Chemical denotes APS
1097 801-804 Chemical denotes APS
1098 975-978 Chemical denotes APS
1099 1183-1197 Chemical denotes Polysaccharide MESH:D011134
1100 1346-1361 Chemical denotes polysaccharides MESH:D011134
1101 1516-1530 Chemical denotes polysaccharide MESH:D011134
1102 54-63 Disease denotes infection MESH:D007239
1103 775-790 Disease denotes virus infection MESH:D001102
1104 1009-1020 Disease denotes hepatitis B MESH:D006509
1105 1648-1657 Disease denotes infection MESH:D007239

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T124 9-17 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T125 54-63 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T126 654-657 Disease denotes APS http://purl.obolibrary.org/obo/MONDO_0017278
T127 687-696 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T128 775-790 Disease denotes virus infection http://purl.obolibrary.org/obo/MONDO_0005108
T129 781-790 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T130 801-804 Disease denotes APS http://purl.obolibrary.org/obo/MONDO_0017278
T131 857-879 Disease denotes foot-and-mouth disease http://purl.obolibrary.org/obo/MONDO_0005765
T132 866-879 Disease denotes mouth disease http://purl.obolibrary.org/obo/MONDO_0006858
T133 975-978 Disease denotes APS http://purl.obolibrary.org/obo/MONDO_0017278
T134 1009-1020 Disease denotes hepatitis B http://purl.obolibrary.org/obo/MONDO_0005344
T135 1009-1018 Disease denotes hepatitis http://purl.obolibrary.org/obo/MONDO_0002251
T136 1269-1278 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T137 1648-1657 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T343 221-225 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T344 221-225 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T345 226-231 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T346 775-780 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T347 855-856 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T348 866-871 http://www.ebi.ac.uk/efo/EFO_0000825 denotes mouth
T349 880-885 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T350 910-915 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T351 987-988 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T352 1019-1020 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T353 1104-1119 http://purl.obolibrary.org/obo/CL_0000451 denotes dendritic cells
T354 1147-1165 http://purl.obolibrary.org/obo/CL_0000815 denotes regulatory T cells
T355 1177-1180 http://purl.obolibrary.org/obo/CLO_0001046 denotes 116
T356 1237-1245 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T357 1254-1259 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T358 1279-1286 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T359 1559-1562 http://purl.obolibrary.org/obo/CLO_0051582 denotes has

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T458 87-93 Chemical denotes inulin http://purl.obolibrary.org/obo/CHEBI_15443
T459 100-114 Chemical denotes polysaccharide http://purl.obolibrary.org/obo/CHEBI_18154
T460 115-123 Chemical denotes adjuvant http://purl.obolibrary.org/obo/CHEBI_60809
T461 288-294 Chemical denotes inulin http://purl.obolibrary.org/obo/CHEBI_15443
T462 295-304 Chemical denotes adjuvants http://purl.obolibrary.org/obo/CHEBI_60809
T463 426-432 Chemical denotes inulin http://purl.obolibrary.org/obo/CHEBI_15443
T464 433-447 Chemical denotes polysaccharide http://purl.obolibrary.org/obo/CHEBI_18154
T465 448-457 Chemical denotes adjuvants http://purl.obolibrary.org/obo/CHEBI_60809
T466 573-588 Chemical denotes polysaccharides http://purl.obolibrary.org/obo/CHEBI_18154
T467 626-635 Chemical denotes adjuvants http://purl.obolibrary.org/obo/CHEBI_60809
T468 654-657 Chemical denotes APS http://purl.obolibrary.org/obo/CHEBI_17709
T469 664-672 Chemical denotes adjuvant http://purl.obolibrary.org/obo/CHEBI_60809
T470 801-804 Chemical denotes APS http://purl.obolibrary.org/obo/CHEBI_17709
T471 835-850 Chemical denotes immunomodulator http://purl.obolibrary.org/obo/CHEBI_50846
T472 975-978 Chemical denotes APS http://purl.obolibrary.org/obo/CHEBI_17709
T473 996-1004 Chemical denotes adjuvant http://purl.obolibrary.org/obo/CHEBI_60809
T474 1021-1024 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T475 1078-1081 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T476 1183-1197 Chemical denotes Polysaccharide http://purl.obolibrary.org/obo/CHEBI_18154
T477 1211-1213 Chemical denotes RI http://purl.obolibrary.org/obo/CHEBI_73814|http://purl.obolibrary.org/obo/CHEBI_8753
T479 1346-1361 Chemical denotes polysaccharides http://purl.obolibrary.org/obo/CHEBI_18154
T480 1435-1437 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T482 1468-1475 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T483 1516-1530 Chemical denotes polysaccharide http://purl.obolibrary.org/obo/CHEBI_18154
T484 1544-1546 Chemical denotes RI http://purl.obolibrary.org/obo/CHEBI_73814|http://purl.obolibrary.org/obo/CHEBI_8753
T486 1605-1614 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T72 721-736 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T73 1054-1070 http://purl.obolibrary.org/obo/GO_0006955 denotes immune responses
T74 1114-1130 http://purl.obolibrary.org/obo/GO_0048469 denotes cells maturation

2_test

Id Subject Object Predicate Lexical cue
32679328-25520500-48281332 525-527 25520500 denotes 20
32679328-28826771-48281333 637-639 28826771 denotes 77
32679328-30057282-48281334 640-643 30057282 denotes 107
32679328-16378665-48281335 644-647 16378665 denotes 112
32679328-18602959-48281336 648-651 18602959 denotes 113
32679328-28245781-48281337 795-798 28245781 denotes 114
32679328-21640133-48281338 969-972 21640133 denotes 115
32679328-23006659-48281339 1177-1180 23006659 denotes 116
T25645 525-527 25520500 denotes 20
T19444 637-639 28826771 denotes 77
T61570 640-643 30057282 denotes 107
T89004 644-647 16378665 denotes 112
T72641 648-651 18602959 denotes 113
T23125 795-798 28245781 denotes 114
T12328 969-972 21640133 denotes 115
T44177 1177-1180 23006659 denotes 116

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T191 0-239 Sentence denotes Although SARS-CoV vaccines can protect against lethal infection, the addition of delta inulin-based polysaccharide adjuvant on day 3 post-challenge can significantly increase serum neutralizing-antibody titers and reduce lung virus titers.
T192 240-400 Sentence denotes It also shows that immunity achieved with delta inulin adjuvants is long-lived, thereby overcoming the natural tendency for rapidly waning coronavirus immunity.
T193 401-529 Sentence denotes This suggests that delta inulin polysaccharide adjuvants have the potential to develop more effective coronavirus vaccines [20].
T194 530-653 Sentence denotes In addition, some Chinese herbal medicinal polysaccharides have been used as safe and effective adjuvants [77,107,112,113].
T195 654-800 Sentence denotes APS as an adjuvant combined with influenza vaccine can improve the immune response and systemic humoral response to H5N1 virus infection [46,114].
T196 801-974 Sentence denotes APS can potentially be used as an immunomodulator for a foot-and-mouth disease virus (FMDV), which is an RNA virus vaccine, and provide better protection against FMDV [115].
T197 975-1182 Sentence denotes APS is also a potent adjuvant for hepatitis B DNA vaccine, and can enhance the immune responses of HBV DNA vaccine via promoting dendritic cells maturation and inhibit the regulatory T cells frequency [116].
T198 1183-1341 Sentence denotes Polysaccharide extract from RI exerts potent anti-IAV activity against human seasonal influenza viruses (H1N1 and H3N2) and AIV (H6N2 and H9N2) in vitro [49].
T199 1342-1511 Sentence denotes The polysaccharides also significantly reduced the expression of pro-inflammatory cytokines (IL-6) and strongly inhibited the protein expression of TLR-3 induced by PR8.
T200 1512-1663 Sentence denotes The polysaccharide extract from RI, therefore, has the potential to be used as an adjunct to antiviral therapy for the treatment of IAV infection [49].

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T12 1009-1018 Phenotype denotes hepatitis http://purl.obolibrary.org/obo/HP_0012115

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T888 9-17 SP_10 denotes SARS-CoV
T889 100-114 CHEBI:18154;CHEBI:18154 denotes polysaccharide
T890 115-123 CHEBI:60809;CHEBI:60809 denotes adjuvant
T891 175-180 UBERON:0001977 denotes serum
T892 194-202 GO:0042571 denotes antibody
T893 221-225 UBERON:0002048 denotes lung
T894 226-231 NCBITaxon:10239 denotes virus
T895 295-304 CHEBI:60809;CHEBI:60809 denotes adjuvants
T896 379-390 NCBITaxon:11118 denotes coronavirus
T897 433-447 CHEBI:18154;CHEBI:18154 denotes polysaccharide
T898 448-457 CHEBI:60809;CHEBI:60809 denotes adjuvants
T899 503-514 NCBITaxon:11118 denotes coronavirus
T900 573-588 CHEBI:18154;CHEBI:18154 denotes polysaccharides
T901 626-635 CHEBI:60809;CHEBI:60809 denotes adjuvants
T902 654-657 PR:000003015 denotes APS
T903 664-672 CHEBI:60809;CHEBI:60809 denotes adjuvant
T904 721-727 UBERON:0002405;GO:0006955 denotes immune
T905 728-736 GO:0006955 denotes response
T906 775-780 NCBITaxon:10239 denotes virus
T907 801-804 PR:000003015 denotes APS
T908 865-866 NCBITaxon:10376 denotes -
T909 866-871 UBERON:0000165 denotes mouth
T910 872-885 NCBITaxon:10376 denotes disease virus
T911 906-909 BV_22 denotes RNA
T912 910-915 BV_22;NCBITaxon:10239 denotes virus
T913 975-978 PR:000003015 denotes APS
T914 996-1004 CHEBI:60809;CHEBI:60809 denotes adjuvant
T915 1054-1060 UBERON:0002405;GO:0006955 denotes immune
T916 1061-1070 GO:0006955 denotes responses
T917 1074-1077 NCBITaxon:10376 denotes HBV
T918 1104-1113 GO:0030425;CL:0000451 denotes dendritic
T919 1114-1119 CL:0000451;GO:0048469 denotes cells
T920 1147-1157 GO:0065007;CL:0000815 denotes regulatory
T921 1158-1165 CL:0000815 denotes T cells
T922 1183-1197 CHEBI:18154;CHEBI:18154 denotes Polysaccharide
T923 1254-1259 SP_6;NCBITaxon:9606 denotes human
T924 1269-1278 NCBITaxon:7719 denotes influenza
T925 1279-1286 NCBITaxon:10239 denotes viruses
T926 1346-1361 CHEBI:18154;CHEBI:18154 denotes polysaccharides
T927 1393-1403 GO:0010467 denotes expression
T928 1435-1439 PR:000001393 denotes IL-6
T929 1468-1475 BV_20 denotes protein
T930 1476-1486 BV_20;GO:0010467 denotes expression
T931 1490-1495 PR:000001154 denotes TLR-3
T932 1516-1530 CHEBI:18154;CHEBI:18154 denotes polysaccharide
T5001 2-11 CHEBI:60809;CHEBI:60809 denotes though SA
T53532 90-101 NCBITaxon:11118 denotes lin-based p
T91671 138-152 CHEBI:18154;CHEBI:18154 denotes challenge can
T57497 153-162 CHEBI:60809;CHEBI:60809 denotes ignifican
T72616 208-219 NCBITaxon:11118 denotes s and reduc
T63196 279-299 CHEBI:18154;CHEBI:18154 denotes th delta inulin adju
T84886 337-346 CHEBI:60809;CHEBI:60809 denotes g the nat
T60597 365-369 PR:000003015 denotes apid
T58920 376-384 CHEBI:60809;CHEBI:60809 denotes ng coron
T52085 439-444 UBERON:0002405;GO:0006955 denotes cchar
T83327 445-453 GO:0006955 denotes de adjuv
T15356 492-497 NCBITaxon:10239 denotes effe
T33687 518-521 PR:000003015 denotes cin
T78054 583-584 NCBITaxon:10376 denotes r
T39345 584-589 UBERON:0000165 denotes ides
T36805 590-603 NCBITaxon:10376 denotes ave been used
T34244 624-627 BV_22 denotes e a
T3725 628-633 BV_22;NCBITaxon:10239 denotes juvan
T25859 693-696 PR:000003015 denotes nza
T78163 714-722 CHEBI:60809;CHEBI:60809 denotes ve the i
T90687 773-778 UBERON:0002405;GO:0006955 denotes 1 vir
T74163 779-788 GO:0006955 denotes s infecti
T55868 792-795 NCBITaxon:10376 denotes 46,
T71115 822-831 GO:0030425;CL:0000451 denotes e used as
T85960 832-837 CL:0000451;GO:0048469 denotes an im
T95331 866-876 GO:0065007;CL:0000815 denotes mouth dise
T63925 877-884 CL:0000815 denotes se viru
T16416 902-916 CHEBI:18154;CHEBI:18154 denotes an RNA virus
T80718 973-978 SP_6;NCBITaxon:9606 denotes . APS
T89419 988-997 NCBITaxon:7719 denotes potent a
T38481 998-1005 NCBITaxon:10239 denotes juvant
T28464 1066-1081 CHEBI:18154;CHEBI:18154 denotes nses of HBV DNA
T20201 1113-1123 GO:0010467 denotes cells mat
T83100 1155-1159 PR:000001393 denotes ry T
T94649 1188-1195 BV_20 denotes acchari
T57507 1196-1206 BV_20;GO:0010467 denotes e extract
T11733 1210-1215 PR:000001154 denotes RI e
T69383 1236-1250 CHEBI:18154;CHEBI:18154 denotes activity agai
T85283 1646-1651 UBERON:0002405;GO:0006955 denotes V inf
T62426 1652-1661 GO:0006955 denotes ction [49

MyTest

Id Subject Object Predicate Lexical cue tao:has_database_id
1076 9-17 Species denotes SARS-CoV Tax:694009
1077 379-390 Species denotes coronavirus Tax:11118
1078 503-514 Species denotes coronavirus Tax:11118
1079 770-774 Species denotes H5N1 Tax:102793
1080 857-885 Species denotes foot-and-mouth disease virus Tax:12110
1081 887-891 Species denotes FMDV Tax:12110
1082 963-967 Species denotes FMDV Tax:12110
1083 1254-1259 Species denotes human Tax:9606
1084 1269-1286 Species denotes influenza viruses Tax:11308
1085 1288-1292 Species denotes H1N1 Tax:114727
1086 1297-1301 Species denotes H3N2 Tax:119210
1087 1321-1325 Species denotes H9N2 Tax:102796
1088 687-696 Species denotes influenza Tax:11320
1089 1074-1077 Species denotes HBV Tax:10407
1090 1233-1236 Species denotes IAV Tax:11320
1091 1307-1310 Species denotes AIV Tax:11309
1092 1644-1647 Species denotes IAV Tax:11320
1093 81-123 Chemical denotes delta inulin-based polysaccharide adjuvant
1094 282-304 Chemical denotes delta inulin adjuvants
1095 573-588 Chemical denotes polysaccharides MESH:D011134
1096 654-657 Chemical denotes APS
1097 801-804 Chemical denotes APS
1098 975-978 Chemical denotes APS
1099 1183-1197 Chemical denotes Polysaccharide MESH:D011134
1100 1346-1361 Chemical denotes polysaccharides MESH:D011134
1101 1516-1530 Chemical denotes polysaccharide MESH:D011134
1102 54-63 Disease denotes infection MESH:D007239
1103 775-790 Disease denotes virus infection MESH:D001102
1104 1009-1020 Disease denotes hepatitis B MESH:D006509
1105 1648-1657 Disease denotes infection MESH:D007239