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PMC:7358770 / 24965-26440 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T257 52-67 Body_part denotes Polysaccharides http://purl.org/sig/ont/fma/fma82746
T258 89-104 Body_part denotes polysaccharides http://purl.org/sig/ont/fma/fma82746
T259 197-202 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T260 320-324 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T261 329-336 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T262 361-366 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T263 379-399 Body_part denotes alveolar macrophages http://purl.org/sig/ont/fma/fma83023
T264 418-433 Body_part denotes oligosaccharide http://purl.org/sig/ont/fma/fma82742
T265 609-623 Body_part denotes polysaccharide http://purl.org/sig/ont/fma/fma82746
T266 756-761 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T267 769-784 Body_part denotes Polysaccharides http://purl.org/sig/ont/fma/fma82746
T268 878-881 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T269 944-951 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T270 975-978 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T271 1046-1060 Body_part denotes polysaccharide http://purl.org/sig/ont/fma/fma82746

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
874 576-586 Gene denotes interferon
875 245-296 Species denotes porcine reproductive and respiratory syndrome virus Tax:28344
876 298-303 Species denotes PRRSV Tax:28344
877 799-815 Species denotes Grifola frondosa Tax:5627
878 842-856 Species denotes enterovirus 71 Tax:39054
879 1066-1083 Species denotes Angelica sinensis Tax:165353
880 1130-1145 Species denotes herbal medicine Tax:1407750
881 371-378 Species denotes porcine Tax:28344
882 629-639 Species denotes Gracilaria Tax:2782
883 665-674 Species denotes influenza Tax:11320
884 495-498 Species denotes IAV Tax:11320
885 1267-1270 Species denotes HBV Tax:10407
886 1430-1433 Species denotes IBV Tax:11120
887 52-67 Chemical denotes Polysaccharides MESH:D011134
888 89-104 Chemical denotes polysaccharides MESH:D011134
889 204-220 Chemical denotes Iota-carrageenan MESH:D002351
890 406-433 Chemical denotes Carrageenan oligosaccharide
891 600-623 Chemical denotes Sulfated polysaccharide
892 769-784 Chemical denotes Polysaccharides MESH:D011134
893 1046-1060 Chemical denotes polysaccharide MESH:D011134
894 1223-1226 Chemical denotes APS
895 1389-1392 Chemical denotes APS
896 1347-1368 Disease denotes hepatitis B infection MESH:D006509
897 352-360 CellLine denotes Marc-145 CVCL:4540

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T98 245-290 Disease denotes porcine reproductive and respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0025494
T99 665-674 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T100 1223-1226 Disease denotes APS http://purl.obolibrary.org/obo/MONDO_0017278
T101 1347-1368 Disease denotes hepatitis B infection http://purl.obolibrary.org/obo/MONDO_0005344
T102 1347-1356 Disease denotes hepatitis http://purl.obolibrary.org/obo/MONDO_0002251
T103 1359-1368 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T104 1389-1392 Disease denotes APS http://purl.obolibrary.org/obo/MONDO_0017278

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T268 197-202 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T269 291-296 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T270 352-360 http://purl.obolibrary.org/obo/CLO_0007536 denotes Marc-145
T271 361-366 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T272 675-680 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T273 681-691 http://purl.obolibrary.org/obo/CLO_0001658 denotes activities
T274 756-761 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T275 854-856 http://purl.obolibrary.org/obo/CLO_0054055 denotes 71
T276 858-859 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T277 882-887 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T278 1000-1005 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T279 1035-1036 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T280 1094-1095 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T281 1217-1220 http://purl.obolibrary.org/obo/CLO_0054060 denotes 102
T282 1227-1230 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T283 1231-1232 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T284 1313-1314 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T285 1357-1358 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T286 1446-1447 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T390 89-104 Chemical denotes polysaccharides http://purl.obolibrary.org/obo/CHEBI_18154
T391 209-220 Chemical denotes carrageenan http://purl.obolibrary.org/obo/CHEBI_3435
T392 329-336 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T393 406-417 Chemical denotes Carrageenan http://purl.obolibrary.org/obo/CHEBI_3435
T394 418-433 Chemical denotes oligosaccharide http://purl.obolibrary.org/obo/CHEBI_50699
T395 576-586 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T396 609-623 Chemical denotes polysaccharide http://purl.obolibrary.org/obo/CHEBI_18154
T397 944-951 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T398 1046-1060 Chemical denotes polysaccharide http://purl.obolibrary.org/obo/CHEBI_18154
T399 1137-1145 Chemical denotes medicine http://purl.obolibrary.org/obo/CHEBI_23888
T400 1223-1226 Chemical denotes APS http://purl.obolibrary.org/obo/CHEBI_17709
T401 1389-1392 Chemical denotes APS http://purl.obolibrary.org/obo/CHEBI_17709

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T41 5-35 http://purl.obolibrary.org/obo/GO_0032897 denotes Inhibiting viral transcription
T42 16-35 http://purl.obolibrary.org/obo/GO_0019083 denotes viral transcription
T43 22-35 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T44 134-151 http://purl.obolibrary.org/obo/GO_0019079 denotes viral replication
T45 134-151 http://purl.obolibrary.org/obo/GO_0019058 denotes viral replication
T46 901-918 http://purl.obolibrary.org/obo/GO_0019079 denotes viral replication
T47 901-918 http://purl.obolibrary.org/obo/GO_0019058 denotes viral replication
T48 975-988 http://purl.obolibrary.org/obo/GO_0032774 denotes RNA synthesis
T49 979-988 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis

2_test

Id Subject Object Predicate Lexical cue
32679328-30747721-48281314 401-403 30747721 denotes 98
32679328-20960180-48281315 763-766 20960180 denotes 100
32679328-27083830-48281316 990-993 27083830 denotes 101
32679328-22155400-48281317 1217-1220 22155400 denotes 102
32679328-19960563-48281318 1370-1373 19960563 denotes 103
32679328-29170045-48281319 1471-1473 29170045 denotes 78
T65591 401-403 30747721 denotes 98
T41855 763-766 20960180 denotes 100
T18612 990-993 27083830 denotes 101
T57053 1217-1220 22155400 denotes 102
T49528 1370-1373 19960563 denotes 103
T57681 1471-1473 29170045 denotes 78

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T155 0-51 Sentence denotes 3.3 Inhibiting viral transcription and replication
T156 52-203 Sentence denotes Polysaccharides, especially sulfated polysaccharides, can directly interfere with viral replication related enzymes and relevant targets in host cells.
T157 204-405 Sentence denotes Iota-carrageenan can effectively inhibit porcine reproductive and respiratory syndrome virus (PRRSV) replication at mRNA and protein levels in both Marc-145 cells and porcine alveolar macrophages [98].
T158 406-599 Sentence denotes Carrageenan oligosaccharide and its sulphated derivative have good inhibitory effects on IAV replication both in vitro and in vivo, while not seem to be dependent on the interferon system [99].
T159 600-768 Sentence denotes Sulfated polysaccharide from Gracilaria lemaneiformis shows anti-influenza virus activities in vitro by inhibiting viral adsorption and replication on host cells [100].
T160 769-995 Sentence denotes Polysaccharides isolated from Grifola frondosa showed resistance against enterovirus 71, a positive-stranded RNA virus, by blocking viral replication and inhibiting viral VP1 protein expression and genomic RNA synthesis [101].
T161 996-1222 Sentence denotes The virus replication was inhibited by a sulfated polysaccharide from Angelica sinensis, which is a commonly used traditional Chinese herbal medicine, at the dose of 10 and 30 mg/kg (26% and 30% inhibition respectively) [102].
T162 1223-1375 Sentence denotes APS has a long-lasting inhibitory effect on HBV replication in vivo, which can be used as a supplementary modality to treat hepatitis B infection [103].
T163 1376-1475 Sentence denotes Furthermore, APS can inhibit the replication of avian IBV in vitro in a dose-dependent manner [78].

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T11 1347-1356 Phenotype denotes hepatitis http://purl.obolibrary.org/obo/HP_0012115

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T695 16-21 NCBITaxon:10239 denotes viral
T696 40-51 GO:0006260 denotes replication
T697 52-67 CHEBI:18154;CHEBI:18154 denotes Polysaccharides
T698 89-104 CHEBI:18154;CHEBI:18154 denotes polysaccharides
T699 134-139 NCBITaxon:10239;GO:0006260 denotes viral
T700 140-151 GO:0006260 denotes replication
T701 209-220 CHEBI:37168;CHEBI:37168 denotes carrageenan
T702 253-265 NCBITaxon:28344;GO:0000003 denotes reproductive
T703 270-281 GO:0045333;NCBITaxon:11886 denotes respiratory
T704 282-290 NCBITaxon:11886 denotes syndrome
T705 291-296 NCBITaxon:10239 denotes virus
T706 379-387 UBERON:0003215 denotes alveolar
T707 388-399 CL:0000583 denotes macrophages
T708 406-417 CHEBI:3435;CHEBI:3435 denotes Carrageenan
T709 418-433 CHEBI:50699;CHEBI:50699 denotes oligosaccharide
T710 499-510 GO:0006260 denotes replication
T711 600-608 CHEBI:35195;CHEBI:35195 denotes Sulfated
T712 609-623 CHEBI:18154;CHEBI:18154 denotes polysaccharide
T713 629-639 NCBITaxon:61463 denotes Gracilaria
T714 640-653 NCBITaxon:2778 denotes lemaneiformis
T715 665-674 NCBITaxon:7719 denotes influenza
T716 675-680 NCBITaxon:10239 denotes virus
T717 715-720 NCBITaxon:10239 denotes viral
T718 736-747 GO:0006260 denotes replication
T719 769-784 CHEBI:18154;CHEBI:18154 denotes Polysaccharides
T720 799-806 NCBITaxon:61463 denotes Grifola
T721 807-815 NCBITaxon:31032 denotes frondosa
T722 842-853 NCBITaxon:9255 denotes enterovirus
T723 860-877 SO:0000984 denotes positive-stranded
T724 878-881 BV_22 denotes RNA
T725 882-887 BV_22;NCBITaxon:10239 denotes virus
T726 901-906 NCBITaxon:10239;GO:0006260 denotes viral
T727 907-918 GO:0006260 denotes replication
T728 934-939 NCBITaxon:10239 denotes viral
T729 944-951 BV_20 denotes protein
T730 952-962 BV_20;GO:0010467 denotes expression
T731 967-974 SO:0001026 denotes genomic
T732 975-988 GO:0032774 denotes RNA synthesis
T733 1000-1005 NCBITaxon:10239 denotes virus
T734 1006-1017 GO:0006260 denotes replication
T735 1046-1060 CHEBI:18154;CHEBI:18154 denotes polysaccharide
T736 1075-1083 NCBITaxon:11034 denotes sinensis
T737 1223-1226 PR:000003015 denotes APS
T738 1267-1270 NCBITaxon:10376 denotes HBV
T739 1271-1282 GO:0006260 denotes replication
T740 1389-1392 PR:000003015 denotes APS
T741 1409-1420 GO:0006260 denotes replication
T742 1424-1429 NCBITaxon:8782 denotes avian
T743 1430-1433 NCBITaxon:10376 denotes IBV
T13893 2-12 NCBITaxon:7719 denotes 3 Inhibit
T85280 13-18 NCBITaxon:10239 denotes ng vi
T14195 53-58 NCBITaxon:10239 denotes olysa
T33401 74-85 GO:0006260 denotes ially sulfa
T71413 107-122 CHEBI:18154;CHEBI:18154 denotes an directly int
T88469 137-144 NCBITaxon:61463 denotes al repl
T91519 145-153 NCBITaxon:31032 denotes cation r
T36405 180-191 NCBITaxon:9255 denotes targets in
T8040 198-218 SO:0000984 denotes ells. Iota-carrageen
T13369 219-222 BV_22 denotes n c
T84892 223-228 BV_22;NCBITaxon:10239 denotes n eff
T19189 242-247 NCBITaxon:10239;GO:0006260 denotes it po
T59648 248-259 GO:0006260 denotes cine reprod
T58346 276-281 NCBITaxon:10239 denotes atory
T59550 286-293 BV_20 denotes rome vi
T53433 294-304 BV_20;GO:0010467 denotes us (PRRSV)
T51422 309-316 SO:0001026 denotes ication
T5031 317-330 GO:0032774 denotes at mRNA and p
T14373 342-347 NCBITaxon:10239 denotes s in
T16171 348-359 GO:0006260 denotes oth Marc-14
T60143 388-402 CHEBI:18154;CHEBI:18154 denotes macrophages [9
T2519 417-425 NCBITaxon:11034 denotes oligosa
T90403 563-566 PR:000003015 denotes nde
T86898 607-610 NCBITaxon:10376 denotes d p
T97708 611-622 GO:0006260 denotes lysaccharid
T31591 729-732 PR:000003015 denotes on
T50435 749-760 GO:0006260 denotes n host cell
T46338 764-769 NCBITaxon:8782 denotes 00].
T33669 770-773 NCBITaxon:10376 denotes oly
T35237 879-884 NCBITaxon:10239 denotes NA vi
T1464 930-935 UBERON:0002405;GO:0006955 denotes ing v
T52703 936-944 GO:0006955 denotes ral VP1
T98125 954-964 GO:0065007 denotes pression a
T36522 981-998 CL:0000235 denotes nthesis [101]. Th
T64620 1027-1032 UBERON:0002405 denotes ited
T32012 1097-1103 GO:0045087 denotes ommonl
T34765 1104-1111 GO:0045087;UBERON:0002405 denotes used t
T9398 1113-1119 CHEBI:16261;CHEBI:16261 denotes dition
T84718 1134-1141 CHEBI:59132;CHEBI:59132 denotes al medi
T32571 1151-1156 UBERON:0002405;GO:0006955 denotes he do
T36630 1157-1166 GO:0006955 denotes e of 10 a
T83142 1198-1208 GO:0065007;CL:0000815 denotes ion respec
T24299 1209-1216 CL:0000815 denotes ively)
T31940 1218-1222 UBERON:0002048;CL:0000082 denotes 02].
T1333 1223-1231 CL:0000082 denotes APS has
T86768 1232-1239 CL:0000084 denotes long-l
T8819 1258-1268 GO:0042571 denotes ffect on H
T32991 1285-1288 PR:F4KFT7 denotes vi
T74527 1296-1301 UBERON:0002405;GO:0006955 denotes h can
T98837 1302-1311 GO:0006955 denotes be used a
T50839 1335-1345 UBERON:0001004 denotes ty to trea
T99890 1346-1355 NCBITaxon:12814 denotes hepatiti
T31576 1356-1361 NCBITaxon:10239 denotes B in
T74467 1363-1366 NCBITaxon:11886 denotes cti
T65959 1394-1398 UBERON:0002048 denotes an i
T40151 1417-1421 NCBITaxon:10088 denotes ion
T40664 1442-1453 CHEBI:3435;CHEBI:3435 denotes in a dose-

MyTest

Id Subject Object Predicate Lexical cue tao:has_database_id
874 576-586 Gene denotes interferon
875 245-296 Species denotes porcine reproductive and respiratory syndrome virus Tax:28344
876 298-303 Species denotes PRRSV Tax:28344
877 799-815 Species denotes Grifola frondosa Tax:5627
878 842-856 Species denotes enterovirus 71 Tax:39054
879 1066-1083 Species denotes Angelica sinensis Tax:165353
880 1130-1145 Species denotes herbal medicine Tax:1407750
881 371-378 Species denotes porcine Tax:28344
882 629-639 Species denotes Gracilaria Tax:2782
883 665-674 Species denotes influenza Tax:11320
884 495-498 Species denotes IAV Tax:11320
885 1267-1270 Species denotes HBV Tax:10407
886 1430-1433 Species denotes IBV Tax:11120
887 52-67 Chemical denotes Polysaccharides MESH:D011134
888 89-104 Chemical denotes polysaccharides MESH:D011134
889 204-220 Chemical denotes Iota-carrageenan MESH:D002351
890 406-433 Chemical denotes Carrageenan oligosaccharide
891 600-623 Chemical denotes Sulfated polysaccharide
892 769-784 Chemical denotes Polysaccharides MESH:D011134
893 1046-1060 Chemical denotes polysaccharide MESH:D011134
894 1223-1226 Chemical denotes APS
895 1389-1392 Chemical denotes APS
896 1347-1368 Disease denotes hepatitis B infection MESH:D006509
897 352-360 CellLine denotes Marc-145 CVCL:4540