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PMC:7354481 / 59037-60915 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T380 178-187 Body_part denotes Cytokines http://purl.org/sig/ont/fma/fma84050
T381 226-230 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T382 286-299 Body_part denotes Interleukin-1 http://purl.org/sig/ont/fma/fma86583
T383 286-297 Body_part denotes Interleukin http://purl.org/sig/ont/fma/fma86578
T384 314-334 Body_part denotes extracellular matrix http://purl.org/sig/ont/fma/fma9672
T385 338-351 Body_part denotes Interleukin-5 http://purl.org/sig/ont/fma/fma264830
T386 338-349 Body_part denotes Interleukin http://purl.org/sig/ont/fma/fma86578
T387 400-408 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T388 419-423 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T389 451-464 Body_part denotes Immune system http://purl.org/sig/ont/fma/fma9825
T390 491-503 Body_part denotes interleukins http://purl.org/sig/ont/fma/fma86578
T391 505-514 Body_part denotes prolactin http://purl.org/sig/ont/fma/fma83358
T392 527-535 Body_part denotes hormones http://purl.org/sig/ont/fma/fma12278
T393 681-689 Body_part denotes Cytokine http://purl.org/sig/ont/fma/fma84050
T394 690-698 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T395 844-847 Body_part denotes map http://purl.org/sig/ont/fma/fma67847
T396 897-902 Body_part denotes Blood http://purl.org/sig/ont/fma/fma9670
T397 985-999 Body_part denotes Interleukin-10 http://purl.org/sig/ont/fma/fma264825
T398 985-996 Body_part denotes Interleukin http://purl.org/sig/ont/fma/fma86578
T399 1022-1035 Body_part denotes Interleukin-4 http://purl.org/sig/ont/fma/fma264831
T400 1022-1033 Body_part denotes Interleukin http://purl.org/sig/ont/fma/fma86578
T401 1040-1054 Body_part denotes Interleukin-13 http://purl.org/sig/ont/fma/fma264824
T402 1040-1051 Body_part denotes Interleukin http://purl.org/sig/ont/fma/fma86578
T403 1125-1134 Body_part denotes Chemokine http://purl.org/sig/ont/fma/fma241981
T404 1150-1160 Body_part denotes chemokines http://purl.org/sig/ont/fma/fma241981
T405 1445-1456 Body_part denotes nucleotides http://purl.org/sig/ont/fma/fma82740
T406 1523-1534 Body_part denotes nucleotides http://purl.org/sig/ont/fma/fma82740
T407 1570-1581 Body_part denotes nucleotides http://purl.org/sig/ont/fma/fma82740

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T72 226-230 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T73 451-464 Body_part denotes Immune system http://purl.obolibrary.org/obo/UBERON_0002405
T74 897-902 Body_part denotes Blood http://purl.obolibrary.org/obo/UBERON_0000178

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T327 622-635 Disease denotes Legionellosis http://purl.obolibrary.org/obo/MONDO_0005823
T328 648-668 Disease denotes Rheumatoid arthritis http://purl.obolibrary.org/obo/MONDO_0008383
T329 659-668 Disease denotes arthritis http://purl.obolibrary.org/obo/MONDO_0005578

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T707 53-55 http://purl.obolibrary.org/obo/CLO_0007074 denotes kB
T708 53-55 http://purl.obolibrary.org/obo/CLO_0051988 denotes kB
T709 65-74 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T710 81-83 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T711 84-93 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T712 226-230 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T713 226-230 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T714 286-299 http://purl.obolibrary.org/obo/PR_000001091 denotes Interleukin-1
T715 409-423 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity, cell
T716 451-464 http://purl.obolibrary.org/obo/UBERON_0002405 denotes Immune system
T717 465-474 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T718 505-514 http://purl.obolibrary.org/obo/PR_000013246 denotes prolactin
T719 558-567 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T720 592-601 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T721 748-759 http://purl.obolibrary.org/obo/PR_000012867 denotes Plasminogen
T722 760-770 http://purl.obolibrary.org/obo/CLO_0001658 denotes activating
T723 802-811 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T724 834-843 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T725 848-850 http://purl.obolibrary.org/obo/CLO_0009141 denotes ST
T726 848-850 http://purl.obolibrary.org/obo/CLO_0050980 denotes ST
T727 870-879 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T728 897-902 http://purl.obolibrary.org/obo/UBERON_0000178 denotes Blood
T729 897-902 http://www.ebi.ac.uk/efo/EFO_0000296 denotes Blood
T730 963-972 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T731 985-999 http://purl.obolibrary.org/obo/PR_000001471 denotes Interleukin-10
T732 1000-1009 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T733 1055-1064 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T734 1193-1195 http://purl.obolibrary.org/obo/CLO_0002709 denotes DB
T735 1210-1220 http://purl.obolibrary.org/obo/SO_0000418 denotes Signalling
T736 1241-1243 http://purl.obolibrary.org/obo/CLO_0007074 denotes kB
T737 1241-1243 http://purl.obolibrary.org/obo/CLO_0051988 denotes kB
T738 1244-1253 http://purl.obolibrary.org/obo/SO_0000418 denotes Signaling
T739 1410-1412 http://purl.obolibrary.org/obo/CLO_0002675 denotes D3
T740 1626-1628 http://purl.obolibrary.org/obo/CLO_0002709 denotes DB
T741 1733-1742 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T742 1770-1779 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T43 50-52 Chemical denotes NF http://purl.obolibrary.org/obo/CHEBI_141424|http://purl.obolibrary.org/obo/CHEBI_25573|http://purl.obolibrary.org/obo/CHEBI_1224
T40205 78-80 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T85801 383-388 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T49332 491-503 Chemical denotes interleukins http://purl.obolibrary.org/obo/CHEBI_52998
T78269 520-535 Chemical denotes growth hormones http://purl.obolibrary.org/obo/CHEBI_37845
T69867 527-535 Chemical denotes hormones http://purl.obolibrary.org/obo/CHEBI_24621
T9718 552-554 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T96062 848-850 Chemical denotes ST http://purl.obolibrary.org/obo/CHEBI_141393
T62064 952-957 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T74514 958-962 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545
T80070 1185-1192 Chemical denotes Pathway http://purl.obolibrary.org/obo/CHEBI_34922
T81989 1221-1228 Chemical denotes Pathway http://purl.obolibrary.org/obo/CHEBI_34922
T91246 1238-1240 Chemical denotes NF http://purl.obolibrary.org/obo/CHEBI_141424|http://purl.obolibrary.org/obo/CHEBI_25573|http://purl.obolibrary.org/obo/CHEBI_1224
T61187 1254-1261 Chemical denotes Pathway http://purl.obolibrary.org/obo/CHEBI_34922
T98824 1290-1297 Chemical denotes Pathway http://purl.obolibrary.org/obo/CHEBI_34922
T84779 1333-1340 Chemical denotes Pathway http://purl.obolibrary.org/obo/CHEBI_34922
T97841 1363-1369 Chemical denotes Action http://purl.obolibrary.org/obo/CHEBI_5133
T1497 1370-1377 Chemical denotes Pathway http://purl.obolibrary.org/obo/CHEBI_34922
T53481 1402-1412 Chemical denotes vitamin D3 http://purl.obolibrary.org/obo/CHEBI_28940
T72741 1402-1409 Chemical denotes vitamin http://purl.obolibrary.org/obo/CHEBI_33229
T61528 1435-1444 Chemical denotes guanosine http://purl.obolibrary.org/obo/CHEBI_16750
T66639 1445-1456 Chemical denotes nucleotides http://purl.obolibrary.org/obo/CHEBI_36976
T94256 1478-1487 Chemical denotes retinoate http://purl.obolibrary.org/obo/CHEBI_139589|http://purl.obolibrary.org/obo/CHEBI_15036
T23098 1501-1503 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T46810 1513-1522 Chemical denotes guanosine http://purl.obolibrary.org/obo/CHEBI_16750
T58030 1523-1534 Chemical denotes nucleotides http://purl.obolibrary.org/obo/CHEBI_36976
T44793 1560-1569 Chemical denotes adenosine http://purl.obolibrary.org/obo/CHEBI_16335
T28161 1570-1581 Chemical denotes nucleotides http://purl.obolibrary.org/obo/CHEBI_36976
T93154 1594-1596 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T96820 1606-1613 Chemical denotes Pathway http://purl.obolibrary.org/obo/CHEBI_34922
T34427 1674-1677 Chemical denotes AP1 http://purl.obolibrary.org/obo/CHEBI_62519

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T98 159-165 Phenotype denotes sepsis http://purl.obolibrary.org/obo/HP_0100806
T99 648-668 Phenotype denotes Rheumatoid arthritis http://purl.obolibrary.org/obo/HP_0001370

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T297 65-74 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T298 84-101 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T299 84-93 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T300 140-155 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T301 192-213 http://purl.obolibrary.org/obo/GO_0006954 denotes Inflammatory Response
T302 300-310 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T303 352-375 http://purl.obolibrary.org/obo/GO_0042981 denotes regulation of apoptosis
T304 352-362 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T305 366-375 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T306 366-375 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T307 400-417 http://purl.obolibrary.org/obo/GO_0005125 denotes cytokine activity
T308 419-432 http://purl.obolibrary.org/obo/GO_0048870 denotes cell motility
T309 438-447 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T310 438-447 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T311 465-474 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T312 520-526 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T313 558-575 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T314 558-567 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T315 592-609 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T316 592-601 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T317 748-770 http://purl.obolibrary.org/obo/GO_0031639 denotes Plasminogen activating
T318 802-819 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T319 802-811 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T320 834-843 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T321 860-869 http://purl.obolibrary.org/obo/GO_0097194 denotes Apoptosis
T322 860-869 http://purl.obolibrary.org/obo/GO_0006915 denotes Apoptosis
T323 870-887 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T324 870-879 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T325 897-914 http://purl.obolibrary.org/obo/GO_0007596 denotes Blood coagulation
T326 903-914 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation
T327 963-972 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T328 1000-1009 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T329 1055-1064 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T330 1077-1086 http://purl.obolibrary.org/obo/GO_0009058 denotes Formation
T331 1210-1228 http://purl.obolibrary.org/obo/GO_0007165 denotes Signalling Pathway
T332 1210-1220 http://purl.obolibrary.org/obo/GO_0023052 denotes Signalling
T333 1244-1261 http://purl.obolibrary.org/obo/GO_0007165 denotes Signaling Pathway
T334 1244-1253 http://purl.obolibrary.org/obo/GO_0023052 denotes Signaling
T335 1322-1332 http://purl.obolibrary.org/obo/GO_0008152 denotes Metabolism
T336 1402-1425 http://purl.obolibrary.org/obo/GO_1901755 denotes vitamin D3 biosynthesis
T337 1413-1425 http://purl.obolibrary.org/obo/GO_0009058 denotes biosynthesis
T338 1445-1468 http://purl.obolibrary.org/obo/GO_0009166 denotes nucleotides degradation
T339 1457-1468 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation
T340 1488-1500 http://purl.obolibrary.org/obo/GO_0009058 denotes biosynthesis
T341 1523-1546 http://purl.obolibrary.org/obo/GO_0009166 denotes nucleotides degradation
T342 1535-1546 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation
T343 1570-1593 http://purl.obolibrary.org/obo/GO_0009166 denotes nucleotides degradation
T344 1582-1593 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation
T345 1647-1662 http://purl.obolibrary.org/obo/GO_0006351 denotes transcriptional
T346 1733-1742 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T347 1770-1779 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T450 0-20 Sentence denotes WikiPathways p-Adj
T451 21-77 Sentence denotes Photodynamic therapy-induced NF-kB survival signaling 0
T452 78-113 Sentence denotes IL-18 signaling pathway 8.6 × 10−9
T453 114-177 Sentence denotes miRNAs involvement in the immune response in sepsis 2.4 × 10−8
T454 178-225 Sentence denotes Cytokines and Inflammatory Response 9.9 × 10−7
T455 226-251 Sentence denotes Lung fibrosis 2.5 × 10−6
T456 252-269 Sentence denotes BioPlanet p-Adj
T457 270-285 Sentence denotes Oncostatin M 0
T458 286-337 Sentence denotes Interleukin-1 regulation of extracellular matrix 0
T459 338-378 Sentence denotes Interleukin-5 regulation of apoptosis 0
T460 379-450 Sentence denotes TNF-alpha effects on cytokine activity, cell motility, and apoptosis 0
T461 451-538 Sentence denotes Immune system signaling by interferons, interleukins, prolactin, and growth hormones 0
T462 539-551 Sentence denotes KEGG p-Adj
T463 552-587 Sentence denotes IL-17 signaling pathway 1.3 × 10−9
T464 588-621 Sentence denotes TNF signaling pathway 1.6 × 10−9
T465 622-647 Sentence denotes Legionellosis 3.5 × 10−9
T466 648-680 Sentence denotes Rheumatoid arthritis 5.4 × 10−9
T467 681-731 Sentence denotes Cytokine-cytokine receptor interaction 6.6 × 10−9
T468 732-747 Sentence denotes PANTHER p-Adj
T469 748-787 Sentence denotes Plasminogen activating cascade 0.00156
T470 788-828 Sentence denotes Toll receptor signaling pathway 0.00911
T471 829-859 Sentence denotes CCKR signaling map ST 0.02550
T472 860-896 Sentence denotes Apoptosis signaling pathway 0.10282
T473 897-923 Sentence denotes Blood coagulation 0.10433
T474 924-940 Sentence denotes REACTOME p-Adj
T475 941-984 Sentence denotes Interferon alpha/beta signaling 1.6 × 10−9
T476 985-1021 Sentence denotes Interleukin-10 signaling 2.5 × 10−9
T477 1022-1076 Sentence denotes Interleukin-4 and Interleukin-13 signaling 2.4 × 10−7
T478 1077-1124 Sentence denotes Formation of the cornified envelope 1.3 × 10−5
T479 1125-1169 Sentence denotes Chemokine receptors bind chemokines 0.00047
T480 1170-1203 Sentence denotes Small Molecule Pathway DB p-Adj
T481 1204-1237 Sentence denotes CD40L Signalling Pathway 0.25268
T482 1238-1270 Sentence denotes NF-kB Signaling Pathway 0.25268
T483 1271-1308 Sentence denotes Toll-Like Receptor Pathway 2 0.25268
T484 1309-1349 Sentence denotes Capecitabine Metabolism Pathway 0.25268
T485 1350-1386 Sentence denotes Capecitabine Action Pathway 0.25268
T486 1387-1401 Sentence denotes BIOCYC p-Adj
T487 1402-1434 Sentence denotes vitamin D3 biosynthesis 0.03597
T488 1435-1477 Sentence denotes guanosine nucleotides degradation 0.03597
T489 1478-1512 Sentence denotes retinoate biosynthesis II 0.03597
T490 1513-1559 Sentence denotes guanosine nucleotides degradation III 0.03597
T491 1560-1605 Sentence denotes adenosine nucleotides degradation II 0.03597
T492 1606-1636 Sentence denotes Pathway Interaction DB p-Adj
T493 1637-1718 Sentence denotes Validated transcriptional targets of AP1 family members Fra1 and Fra2 3.8 × 10−5
T494 1719-1758 Sentence denotes IL23-mediated signaling events 0.00050
T495 1759-1788 Sentence denotes CD40/CD40L signaling 0.02539
T496 1789-1840 Sentence denotes Glucocorticoid receptor regulatory network 0.02603
T497 1841-1878 Sentence denotes LPA receptor mediated events 0.04171

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1735 79-84 Gene denotes L-18 Gene:3606
1736 271-284 Gene denotes ncostatin M Gene:5008
1737 287-300 Gene denotes nterleukin-1 Gene:3552
1738 380-389 Gene denotes NF-alpha Gene:7124
1739 506-515 Gene denotes rolactin, Gene:5617
1740 553-558 Gene denotes L-17 Gene:3605
1741 589-592 Gene denotes NF Gene:7124
1742 942-963 Gene denotes nterferon alpha/beta Gene:3440
1743 986-1000 Gene denotes nterleukin-10 Gene:3586
1744 1023-1036 Gene denotes nterleukin-4 Gene:3565
1745 1041-1055 Gene denotes nterleukin-13 Gene:3596
1746 1205-1210 Gene denotes D40L Gene:959
1747 1694-1698 Gene denotes ra1 Gene:8061
1748 1703-1708 Gene denotes ra2 Gene:2355
1749 1720-1724 Gene denotes L23- Gene:51561
1750 1760-1764 Gene denotes D40/ Gene:958
1751 1765-1770 Gene denotes D40L Gene:959
1752 339-352 Gene denotes nterleukin-5 Gene:3567
1753 1561-1570 Chemical denotes denosine MESH:D000241
1754 160-167 Disease denotes epsis MESH:D018805
1755 232-241 Disease denotes ibrosis MESH:D005355
1756 623-637 Disease denotes egionellosis MESH:D007876
1757 649-670 Disease denotes heumatoid arthritis MESH:D001172