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PMC:7354481 / 51110-51852 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T331 282-286 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T332 287-293 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T333 332-336 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T334 473-479 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T335 735-741 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T67 282-286 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T68 287-293 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T69 332-336 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T318 104-112 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T319 262-270 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T320 536-544 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T321 724-732 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T571 78-80 http://purl.obolibrary.org/obo/CLO_0050050 denotes s1
T572 88-90 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T573 233-235 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T574 233-235 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T575 282-286 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T576 282-286 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T577 332-336 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T578 332-336 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T579 462-463 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T580 579-581 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T581 679-680 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T85930 233-235 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T55233 391-393 Chemical denotes S3 http://purl.obolibrary.org/obo/CHEBI_29388

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T323 0-81 Sentence denotes The following are available online at https://www.mdpi.com/1999-4915/12/6/614/s1.
T324 82-91 Sentence denotes Table S1.
T325 92-226 Sentence denotes List of the SARS-CoV-2 strains isolated from different geographical regions that included for the conservation of miR mimic sequences.
T326 227-384 Sentence denotes Table S2.Upregulated pathways from SARS-CoV-2 infected lung tissue biopsies when compared to the healthy lung biopsies, obtained from Bioproject PRJNA615032.
T327 385-394 Sentence denotes Table S3.
T328 395-571 Sentence denotes Segments spanning the putative viral miR sequences were taken from a complete genome multiple sequence alignment of geographically different SARS-CoV-2 and other coronaviruses.
T329 572-742 Sentence denotes Figure S1. miR8067 structure is drawn with miREval algorithm (http://mimirna.centenary.org.au/mireval/) as a stem loop prediction sequence found on the SARS-CoV-2 genome.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1206 584-591 Gene denotes iR8067 Gene:102465869
1207 105-115 Species denotes ARS-CoV-2 Tax:2697049
1208 537-547 Species denotes ARS-CoV-2 Tax:2697049
1209 558-571 Species denotes oronaviruses. Tax:11118
1210 725-735 Species denotes ARS-CoV-2 Tax:2697049
1211 263-282 Disease denotes ARS-CoV-2 infected MESH:C000657245