PMC:7354481 / 21642-22193 JSONTXT

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T82","span":{"begin":409,"end":417},"obj":"Disease"},{"id":"T83","span":{"begin":528,"end":540},"obj":"Disease"}],"attributes":[{"id":"A82","pred":"mondo_id","subj":"T82","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A83","pred":"mondo_id","subj":"T83","obj":"http://purl.obolibrary.org/obo/MONDO_0021166"}],"text":"All of these genes were also analysed using cluster analysis tools provided by the Rosalind bioinformatic data analysis server for different pathways. As shown in Table 4, the Wiki pathways, Bioplanet, KEGG, REACTOME, Panther, Pathway Interaction DB, and the number of virus-host response pathways, were significantly altered. These significantly altered pathways showed correspondingly similar patterns with SARS-CoV-2-mediated known clinical pathologies. These pathways were based on major differences of the target genes for inflammation responses."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T204","span":{"begin":13,"end":18},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T205","span":{"begin":247,"end":249},"obj":"http://purl.obolibrary.org/obo/CLO_0002709"},{"id":"T206","span":{"begin":269,"end":274},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T207","span":{"begin":518,"end":523},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"}],"text":"All of these genes were also analysed using cluster analysis tools provided by the Rosalind bioinformatic data analysis server for different pathways. As shown in Table 4, the Wiki pathways, Bioplanet, KEGG, REACTOME, Panther, Pathway Interaction DB, and the number of virus-host response pathways, were significantly altered. These significantly altered pathways showed correspondingly similar patterns with SARS-CoV-2-mediated known clinical pathologies. These pathways were based on major differences of the target genes for inflammation responses."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T56","span":{"begin":227,"end":234},"obj":"Chemical"}],"attributes":[{"id":"A56","pred":"chebi_id","subj":"T56","obj":"http://purl.obolibrary.org/obo/CHEBI_34922"}],"text":"All of these genes were also analysed using cluster analysis tools provided by the Rosalind bioinformatic data analysis server for different pathways. As shown in Table 4, the Wiki pathways, Bioplanet, KEGG, REACTOME, Panther, Pathway Interaction DB, and the number of virus-host response pathways, were significantly altered. These significantly altered pathways showed correspondingly similar patterns with SARS-CoV-2-mediated known clinical pathologies. These pathways were based on major differences of the target genes for inflammation responses."}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T62","span":{"begin":528,"end":540},"obj":"http://purl.obolibrary.org/obo/GO_0006954"}],"text":"All of these genes were also analysed using cluster analysis tools provided by the Rosalind bioinformatic data analysis server for different pathways. As shown in Table 4, the Wiki pathways, Bioplanet, KEGG, REACTOME, Panther, Pathway Interaction DB, and the number of virus-host response pathways, were significantly altered. These significantly altered pathways showed correspondingly similar patterns with SARS-CoV-2-mediated known clinical pathologies. These pathways were based on major differences of the target genes for inflammation responses."}

{"project":"LitCovid-sentences","denotations":[{"id":"T147","span":{"begin":0,"end":150},"obj":"Sentence"},{"id":"T148","span":{"begin":151,"end":326},"obj":"Sentence"},{"id":"T149","span":{"begin":327,"end":456},"obj":"Sentence"},{"id":"T150","span":{"begin":457,"end":551},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"All of these genes were also analysed using cluster analysis tools provided by the Rosalind bioinformatic data analysis server for different pathways. As shown in Table 4, the Wiki pathways, Bioplanet, KEGG, REACTOME, Panther, Pathway Interaction DB, and the number of virus-host response pathways, were significantly altered. These significantly altered pathways showed correspondingly similar patterns with SARS-CoV-2-mediated known clinical pathologies. These pathways were based on major differences of the target genes for inflammation responses."}

{"project":"LitCovid-PubTator","denotations":[{"id":"378","span":{"begin":409,"end":419},"obj":"Species"},{"id":"379","span":{"begin":528,"end":540},"obj":"Disease"}],"attributes":[{"id":"A378","pred":"tao:has_database_id","subj":"378","obj":"Tax:2697049"},{"id":"A379","pred":"tao:has_database_id","subj":"379","obj":"MESH:D007249"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"All of these genes were also analysed using cluster analysis tools provided by the Rosalind bioinformatic data analysis server for different pathways. As shown in Table 4, the Wiki pathways, Bioplanet, KEGG, REACTOME, Panther, Pathway Interaction DB, and the number of virus-host response pathways, were significantly altered. These significantly altered pathways showed correspondingly similar patterns with SARS-CoV-2-mediated known clinical pathologies. These pathways were based on major differences of the target genes for inflammation responses."}