PMC:7354481 / 11608-12350 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T71","span":{"begin":15,"end":21},"obj":"Body_part"},{"id":"T72","span":{"begin":273,"end":279},"obj":"Body_part"},{"id":"T73","span":{"begin":610,"end":615},"obj":"Body_part"}],"attributes":[{"id":"A71","pred":"fma_id","subj":"T71","obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"A72","pred":"fma_id","subj":"T72","obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"A73","pred":"fma_id","subj":"T73","obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"The SARS-CoV-2 genome sequences from China, Italy, Spain (Valencia), and those for MERS, SARS, OC43 and 229E were obtained from NCBI (GenBank: NC_045512.2, LC528232.1, MT066156.1, MT198652.2, KT225476.2, NC_004718.3, NC_006213.1, NC_002645.1, respectively). The SARS-CoV-2 genome sequences from England (hCoV-19/England/20136087804/2020|EPI_ISL_420910, no treatment) and Turkey (hCoV-19/Turkey/GLAB-CoV008/2020) were obtained from the China National Bioinformatics Center, GISAID database [23] (https://www.gisaid.org). In addition, a SARS-CoV-2 strain isolated from a Turkish patient, and infected to Vero E6 cells passage 4 sequence (hCoV-19/Turkey/ERAGEM-001/2020;) was used for alignment studies with the miRBase mature miRNA search tool."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T47","span":{"begin":4,"end":12},"obj":"Disease"},{"id":"T48","span":{"begin":89,"end":93},"obj":"Disease"},{"id":"T49","span":{"begin":262,"end":270},"obj":"Disease"},{"id":"T50","span":{"begin":535,"end":543},"obj":"Disease"}],"attributes":[{"id":"A47","pred":"mondo_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A48","pred":"mondo_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A49","pred":"mondo_id","subj":"T49","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A50","pred":"mondo_id","subj":"T50","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"The SARS-CoV-2 genome sequences from China, Italy, Spain (Valencia), and those for MERS, SARS, OC43 and 229E were obtained from NCBI (GenBank: NC_045512.2, LC528232.1, MT066156.1, MT198652.2, KT225476.2, NC_004718.3, NC_006213.1, NC_002645.1, respectively). The SARS-CoV-2 genome sequences from England (hCoV-19/England/20136087804/2020|EPI_ISL_420910, no treatment) and Turkey (hCoV-19/Turkey/GLAB-CoV008/2020) were obtained from the China National Bioinformatics Center, GISAID database [23] (https://www.gisaid.org). In addition, a SARS-CoV-2 strain isolated from a Turkish patient, and infected to Vero E6 cells passage 4 sequence (hCoV-19/Turkey/ERAGEM-001/2020;) was used for alignment studies with the miRBase mature miRNA search tool."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T108","span":{"begin":371,"end":377},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9005"},{"id":"T109","span":{"begin":387,"end":393},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9005"},{"id":"T110","span":{"begin":533,"end":534},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T111","span":{"begin":567,"end":568},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T112","span":{"begin":602,"end":615},"obj":"http://purl.obolibrary.org/obo/CLO_0051719"},{"id":"T113","span":{"begin":644,"end":650},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9005"}],"text":"The SARS-CoV-2 genome sequences from China, Italy, Spain (Valencia), and those for MERS, SARS, OC43 and 229E were obtained from NCBI (GenBank: NC_045512.2, LC528232.1, MT066156.1, MT198652.2, KT225476.2, NC_004718.3, NC_006213.1, NC_002645.1, respectively). The SARS-CoV-2 genome sequences from England (hCoV-19/England/20136087804/2020|EPI_ISL_420910, no treatment) and Turkey (hCoV-19/Turkey/GLAB-CoV008/2020) were obtained from the China National Bioinformatics Center, GISAID database [23] (https://www.gisaid.org). In addition, a SARS-CoV-2 strain isolated from a Turkish patient, and infected to Vero E6 cells passage 4 sequence (hCoV-19/Turkey/ERAGEM-001/2020;) was used for alignment studies with the miRBase mature miRNA search tool."}

{"project":"LitCovid-sentences","denotations":[{"id":"T76","span":{"begin":0,"end":257},"obj":"Sentence"},{"id":"T77","span":{"begin":258,"end":519},"obj":"Sentence"},{"id":"T78","span":{"begin":520,"end":742},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The SARS-CoV-2 genome sequences from China, Italy, Spain (Valencia), and those for MERS, SARS, OC43 and 229E were obtained from NCBI (GenBank: NC_045512.2, LC528232.1, MT066156.1, MT198652.2, KT225476.2, NC_004718.3, NC_006213.1, NC_002645.1, respectively). The SARS-CoV-2 genome sequences from England (hCoV-19/England/20136087804/2020|EPI_ISL_420910, no treatment) and Turkey (hCoV-19/Turkey/GLAB-CoV008/2020) were obtained from the China National Bioinformatics Center, GISAID database [23] (https://www.gisaid.org). In addition, a SARS-CoV-2 strain isolated from a Turkish patient, and infected to Vero E6 cells passage 4 sequence (hCoV-19/Turkey/ERAGEM-001/2020;) was used for alignment studies with the miRBase mature miRNA search tool."}

{"project":"2_test","denotations":[{"id":"32512929-24935956-144200712","span":{"begin":490,"end":492},"obj":"24935956"}],"text":"The SARS-CoV-2 genome sequences from China, Italy, Spain (Valencia), and those for MERS, SARS, OC43 and 229E were obtained from NCBI (GenBank: NC_045512.2, LC528232.1, MT066156.1, MT198652.2, KT225476.2, NC_004718.3, NC_006213.1, NC_002645.1, respectively). The SARS-CoV-2 genome sequences from England (hCoV-19/England/20136087804/2020|EPI_ISL_420910, no treatment) and Turkey (hCoV-19/Turkey/GLAB-CoV008/2020) were obtained from the China National Bioinformatics Center, GISAID database [23] (https://www.gisaid.org). In addition, a SARS-CoV-2 strain isolated from a Turkish patient, and infected to Vero E6 cells passage 4 sequence (hCoV-19/Turkey/ERAGEM-001/2020;) was used for alignment studies with the miRBase mature miRNA search tool."}

{"project":"LitCovid-PubTator","denotations":[{"id":"199","span":{"begin":4,"end":14},"obj":"Species"},{"id":"200","span":{"begin":262,"end":272},"obj":"Species"},{"id":"201","span":{"begin":304,"end":311},"obj":"Species"},{"id":"202","span":{"begin":371,"end":377},"obj":"Species"},{"id":"203","span":{"begin":379,"end":386},"obj":"Species"},{"id":"204","span":{"begin":387,"end":393},"obj":"Species"},{"id":"205","span":{"begin":535,"end":545},"obj":"Species"},{"id":"206","span":{"begin":577,"end":584},"obj":"Species"},{"id":"207","span":{"begin":636,"end":643},"obj":"Species"},{"id":"208","span":{"begin":644,"end":650},"obj":"Species"},{"id":"209","span":{"begin":95,"end":99},"obj":"Species"},{"id":"210","span":{"begin":104,"end":108},"obj":"Species"},{"id":"211","span":{"begin":399,"end":402},"obj":"Species"},{"id":"212","span":{"begin":83,"end":87},"obj":"Disease"},{"id":"213","span":{"begin":590,"end":598},"obj":"Disease"}],"attributes":[{"id":"A199","pred":"tao:has_database_id","subj":"199","obj":"Tax:2697049"},{"id":"A200","pred":"tao:has_database_id","subj":"200","obj":"Tax:2697049"},{"id":"A201","pred":"tao:has_database_id","subj":"201","obj":"Tax:2697049"},{"id":"A202","pred":"tao:has_database_id","subj":"202","obj":"Tax:9103"},{"id":"A203","pred":"tao:has_database_id","subj":"203","obj":"Tax:2697049"},{"id":"A204","pred":"tao:has_database_id","subj":"204","obj":"Tax:9103"},{"id":"A205","pred":"tao:has_database_id","subj":"205","obj":"Tax:2697049"},{"id":"A206","pred":"tao:has_database_id","subj":"206","obj":"Tax:9606"},{"id":"A207","pred":"tao:has_database_id","subj":"207","obj":"Tax:2697049"},{"id":"A208","pred":"tao:has_database_id","subj":"208","obj":"Tax:9103"},{"id":"A209","pred":"tao:has_database_id","subj":"209","obj":"Tax:31631"},{"id":"A210","pred":"tao:has_database_id","subj":"210","obj":"Tax:11137"},{"id":"A211","pred":"tao:has_database_id","subj":"211","obj":"Tax:11118"},{"id":"A212","pred":"tao:has_database_id","subj":"212","obj":"MESH:D018352"},{"id":"A213","pred":"tao:has_database_id","subj":"213","obj":"MESH:D007239"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"The SARS-CoV-2 genome sequences from China, Italy, Spain (Valencia), and those for MERS, SARS, OC43 and 229E were obtained from NCBI (GenBank: NC_045512.2, LC528232.1, MT066156.1, MT198652.2, KT225476.2, NC_004718.3, NC_006213.1, NC_002645.1, respectively). The SARS-CoV-2 genome sequences from England (hCoV-19/England/20136087804/2020|EPI_ISL_420910, no treatment) and Turkey (hCoV-19/Turkey/GLAB-CoV008/2020) were obtained from the China National Bioinformatics Center, GISAID database [23] (https://www.gisaid.org). In addition, a SARS-CoV-2 strain isolated from a Turkish patient, and infected to Vero E6 cells passage 4 sequence (hCoV-19/Turkey/ERAGEM-001/2020;) was used for alignment studies with the miRBase mature miRNA search tool."}