PMC:7352545 / 64822-65745
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T625 | 75-79 | Body_part | denotes | Cell | http://purl.org/sig/ont/fma/fma68646 |
| T626 | 187-193 | Body_part | denotes | serine | http://purl.org/sig/ont/fma/fma82764 |
| T627 | 263-275 | Body_part | denotes | cell surface | http://purl.org/sig/ont/fma/fma67653 |
| T628 | 263-267 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T629 | 373-378 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T630 | 592-597 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T631 | 824-836 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T632 | 858-863 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T633 | 908-916 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T931 | 7-18 | http://purl.obolibrary.org/obo/PR_000001403 | denotes | Tetraspanin |
| T932 | 26-27 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T933 | 75-79 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | Cell |
| T934 | 104-115 | http://purl.obolibrary.org/obo/PR_000001403 | denotes | Tetraspanin |
| T935 | 129-140 | http://purl.obolibrary.org/obo/PR_000001403 | denotes | tetraspanin |
| T936 | 226-227 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T937 | 232-242 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activating |
| T938 | 261-267 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a cell |
| T939 | 373-378 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T940 | 384-396 | http://purl.obolibrary.org/obo/PR_000001403 | denotes | tetraspanins |
| T941 | 495-507 | http://purl.obolibrary.org/obo/PR_000001403 | denotes | Tetraspanins |
| T942 | 513-518 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T943 | 592-597 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T944 | 763-774 | http://purl.obolibrary.org/obo/PR_000001403 | denotes | tetraspanin |
| T945 | 858-863 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T946 | 918-921 | http://purl.obolibrary.org/obo/CLO_0054061 | denotes | 132 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T65140 | 181-183 | Chemical | denotes | II | http://purl.obolibrary.org/obo/CHEBI_74067 |
| T84884 | 184-186 | Chemical | denotes | TM | http://purl.obolibrary.org/obo/CHEBI_55460|http://purl.obolibrary.org/obo/CHEBI_74861 |
| T81467 | 187-193 | Chemical | denotes | serine | http://purl.obolibrary.org/obo/CHEBI_17822 |
| T35507 | 407-409 | Chemical | denotes | TM | http://purl.obolibrary.org/obo/CHEBI_55460|http://purl.obolibrary.org/obo/CHEBI_74861 |
| T28232 | 824-836 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T63953 | 908-916 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T111 | 570-597 | http://purl.obolibrary.org/obo/GO_0046718 | denotes | viral entry into host cells |
| T112 | 576-591 | http://purl.obolibrary.org/obo/GO_0044409 | denotes | entry into host |
| T113 | 868-879 | http://purl.obolibrary.org/obo/GO_0006897 | denotes | endocytosis |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T625 | 0-6 | Sentence | denotes | 6.3.9. |
| T626 | 7-103 | Sentence | denotes | Tetraspanin CD9 is a Surface factor for MERS-CoV Entry Via Scaffold Cell Receptors and Proteases |
| T627 | 104-290 | Sentence | denotes | Tetraspanin CD9, but not tetraspanin CD81, associates with DPP4 and the type II TM serine protease (TTSP) member TMPRSS2, a CoV-activating protease, to form a cell surface complex [131]. |
| T628 | 291-379 | Sentence | denotes | This CD9–DPP4–TMPRSS2 complex permits MERS-CoV pseudovirus entrance into the host cells. |
| T629 | 380-494 | Sentence | denotes | The tetraspanins have four TM spanning regions linked by one large and one small loop in the extracellular region. |
| T630 | 495-561 | Sentence | denotes | Tetraspanins form virus entry baselines and open CoV entry routes. |
| T631 | 562-652 | Sentence | denotes | To help viral entry into host cells, MERS-CoV S interacts with DPP4 receptors via the RBD. |
| T632 | 653-747 | Sentence | denotes | Receptor involvement causes cleavage using proteases such as the previously described TMPRSS2. |
| T633 | 748-837 | Sentence | denotes | Association of tetraspanin CD9 with the DPP4–TMPRSS2 complex triggers the S glycoprotein. |
| T634 | 838-923 | Sentence | denotes | MERS-CoVs enter the cells via endocytosis and cathepsins cleave the S proteins [132]. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32604730-28759649-51944097 | 285-288 | 28759649 | denotes | 131 |
| T4448 | 285-288 | 28759649 | denotes | 131 |