PMC:7352545 / 27892-28684
Annnotations
LitCovid_Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T100 | 11-13 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | SA |
| T101 | 109-111 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | SA |
| T102 | 473-475 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | SA |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T228 | 138-151 | Body_part | denotes | glycoproteins | http://purl.org/sig/ont/fma/fma62925 |
| T229 | 223-227 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T230 | 259-267 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T231 | 281-291 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
| T232 | 676-679 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T233 | 714-718 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T109 | 167-176 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T110 | 425-434 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T111 | 578-587 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T365 | 179-184 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T366 | 223-227 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T367 | 250-258 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
| T368 | 281-300 | http://purl.obolibrary.org/obo/CHEBI_33708 | denotes | amino acid residues |
| T369 | 281-300 | http://purl.obolibrary.org/obo/PR_000036907 | denotes | amino acid residues |
| T370 | 437-442 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T371 | 504-507 | http://purl.obolibrary.org/obo/CLO_0053120 | denotes | HEs |
| T372 | 590-595 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T373 | 714-718 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T374 | 746-749 | http://purl.obolibrary.org/obo/CLO_0053120 | denotes | HEs |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T774 | 11-13 | Chemical | denotes | SA | http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801|http://purl.obolibrary.org/obo/CHEBI_26667 |
| T779 | 106-108 | Chemical | denotes | Ac | http://purl.obolibrary.org/obo/CHEBI_33337|http://purl.obolibrary.org/obo/CHEBI_40574 |
| T781 | 109-111 | Chemical | denotes | SA | http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801|http://purl.obolibrary.org/obo/CHEBI_26667 |
| T786 | 138-151 | Chemical | denotes | glycoproteins | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T787 | 259-267 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T788 | 281-291 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T789 | 281-286 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T790 | 287-291 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T791 | 473-475 | Chemical | denotes | SA | http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801|http://purl.obolibrary.org/obo/CHEBI_26667 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T48 | 320-335 | http://purl.obolibrary.org/obo/GO_0006487 | denotes | N-glycosylation |
| T49 | 322-335 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T273 | 0-6 | Sentence | denotes | 5.1.3. |
| T274 | 7-33 | Sentence | denotes | CoV SA-O-Acetylesterase HE |
| T275 | 34-122 | Sentence | denotes | CoVs and toroviruses of the Coronaviridae family are specific for the O-Ac SA receptors. |
| T276 | 123-189 | Sentence | denotes | Their S and HE glycoproteins are similar to influenza C virus HEF. |
| T277 | 190-347 | Sentence | denotes | CoVs and all toroviruses bear HE gene form class I envelope membrane proteins of about 400 amino acid residues which bear 7 to 12 N-glycosylation sites [50]. |
| T278 | 348-380 | Sentence | denotes | HE multimer forms enter virions. |
| T279 | 381-499 | Sentence | denotes | Bovine CoV (BCoV) and HCoV-OC43, similar to influenza C virus, recognize Neu5,9Ac2 and bear SA-9-O-acetylesterase [8]. |
| T280 | 500-534 | Sentence | denotes | CoV HEs are all O-acetylesterases. |
| T281 | 535-728 | Sentence | denotes | The HE enzymes found in torovirus, CoV and influenza C virus are evolutionarily interspecies-mutated with about 30% homology by heterologous RNA recombination [51] and horizontal gene transfer. |
| T282 | 729-792 | Sentence | denotes | Therefore, viral HEs are diverse and widespread over evolution. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32604730-2319653-51943990 | 343-345 | 2319653 | denotes | 50 |
| 32604730-3380803-51943991 | 496-497 | 3380803 | denotes | 8 |
| 32604730-1984666-51943992 | 695-697 | 1984666 | denotes | 51 |
| T27350 | 343-345 | 2319653 | denotes | 50 |
| T79342 | 496-497 | 3380803 | denotes | 8 |
| T89890 | 695-697 | 1984666 | denotes | 51 |